Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_B07
(626 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 76 3e-14
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 73 2e-13
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 64 9e-11
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 59 2e-09
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 52 4e-07
07_01_0935 + 7905748-7905765,7906071-7906096,7906142-7906166,790... 35 0.061
06_01_0558 - 3968211-3969475,3970198-3970266,3970374-3970529,397... 33 0.14
05_05_0252 - 23621592-23621912,23621958-23622317,23622979-236230... 31 0.99
11_01_0605 + 4821363-4823246 30 1.7
04_04_0590 + 26457514-26457801,26458849-26459325,26459817-264600... 30 1.7
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 29 2.3
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348... 29 3.0
11_01_0606 + 4831102-4833033 29 4.0
03_01_0110 - 865605-866004,866094-866712,867659-867863 29 4.0
11_01_0194 + 1539847-1541533,1541650-1541730,1541773-1542335 28 7.0
06_01_1186 - 10195175-10195621,10195882-10195930,10196019-101961... 28 7.0
06_01_1076 - 8778210-8778734 28 7.0
03_06_0410 - 33728507-33729415,33729511-33729654,33730054-337309... 28 7.0
07_03_0344 - 16976854-16977186,16978920-16979000 27 9.2
04_04_0579 - 26355431-26355684,26355988-26356073,26356292-263563... 27 9.2
01_01_0174 - 1496543-1496596,1496686-1498131,1498928-1499341 27 9.2
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 75.8 bits (178), Expect = 3e-14
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Frame = +3
Query: 51 VGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRGNL-- 224
VG++G+G +G A L A+ G V L D ++ A+ I L+ L G L
Sbjct: 13 VGVIGAGQMGSGIAQLAAAAGCGVLLLDSDTAALSRAVDSISSSLRRLVAKGQLSQASCE 72
Query: 225 NADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDDNTIXXXXXXXX 404
++ EQ +CV +L +DA V E + E+ ++KKK+F LD + + I
Sbjct: 73 HSIEQIKCVSSVQEL----RDADLVIEAIVESEDIKKKLFVELDKITKPSAILASNTSSI 128
Query: 405 XXXXXXENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTKKTRAIMEEIGQ 569
QVI H NPP + L+EI+ T EV K ++ E +G+
Sbjct: 129 SITRLASATNRPCQVIGMHFFNPPPIMKLIEIIRGADTSEEVFTKVKSFSERLGK 183
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 72.5 bits (170), Expect = 2e-13
Identities = 48/182 (26%), Positives = 83/182 (45%)
Frame = +3
Query: 39 KSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRG 218
K KV I+G GL+G A Y V L +V EK + I IK L++ + G +
Sbjct: 313 KVTKVAILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTE 372
Query: 219 NLNADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDDNTIXXXXXX 398
++ V G D KD V E V EN++LK+++F +L+ + +
Sbjct: 373 E-RYEKAMSLVTGVLDYE-RFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCVLATNTS 430
Query: 399 XXXXXXXXENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTKKTRAIMEEIGQEPV 578
E + K +++ +H +P + +PL+EIV T P+V + ++I + P+
Sbjct: 431 TIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPI 490
Query: 579 TL 584
+
Sbjct: 491 VV 492
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 64.1 bits (149), Expect = 9e-11
Identities = 45/179 (25%), Positives = 82/179 (45%)
Frame = +3
Query: 48 KVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRGNLN 227
KV IVG GL+G A S V L +V E+ + I+ +K L++L K G + +
Sbjct: 313 KVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVKRGQMTKE-D 371
Query: 228 ADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDDNTIXXXXXXXXX 407
+ + + G D ++A V E V E+L LK+K+F +L+ N I
Sbjct: 372 YENKLSLLSGVLDYE-QFREADVVIEAVIEDLSLKQKIFADLEKYCHSNCILATNTSTID 430
Query: 408 XXXXXENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTKKTRAIMEEIGQEPVTL 584
+ + ++ +H +P + +PL+EI+ T +V + ++I + P+ +
Sbjct: 431 LHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAKQIRKTPIVV 489
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 59.3 bits (137), Expect = 2e-09
Identities = 46/182 (25%), Positives = 77/182 (42%)
Frame = +3
Query: 39 KSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRG 218
K KV ++G GL+G A V L +V + + I L+ L K G L
Sbjct: 308 KIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTK 367
Query: 219 NLNADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDDNTIXXXXXX 398
+ ++ +KG D + KD V E V E + LK+ +F +L+ V + I
Sbjct: 368 D-KMNKAMSLLKGALDYS-DFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATNTS 425
Query: 399 XXXXXXXXENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTKKTRAIMEEIGQEPV 578
E + ++I +H +P + +PL+EIV T P+ + + I + PV
Sbjct: 426 TIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKVPV 485
Query: 579 TL 584
+
Sbjct: 486 VV 487
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Frame = +3
Query: 39 KSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRG 218
K KV IVG GL+G A Y V L +V +K + I IK L++ ++G +
Sbjct: 309 KVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVNDKFLDAGIDRIKANLQSRVRNGKMTK 368
Query: 219 NLNADEQFQCVKGTCD------LAIAVKDA---------IFVQE---CVPENLELKKKVF 344
+ ++ + G D + + ++++ F+++ V EN+++K++VF
Sbjct: 369 EIY-EKTLSLLTGVVDYERFKDVDLVIEESNTSNCYLAIYFIEQYWMAVVENVKVKQQVF 427
Query: 345 QNLDNVVDDNTIXXXXXXXXXXXXXXENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKP 524
+L+ + + E + ++ +H +P + +PL+EIV + T P
Sbjct: 428 ADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRSNHTSP 487
Query: 525 EVTKKTRAIMEEIGQEPVTL 584
+V + ++I + PV +
Sbjct: 488 QVVVDLLDVGKKIKKTPVVV 507
>07_01_0935 +
7905748-7905765,7906071-7906096,7906142-7906166,
7906891-7907700,7907803-7907934,7908102-7908470,
7908540-7908671,7909135-7909662
Length = 679
Score = 34.7 bits (76), Expect = 0.061
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = -2
Query: 328 SSKFSGTHSCTKIASLTAIAK-SQVPFTHWNCSSAFRFP-LRSPSFSKVFNCTLISAIAS 155
+S FSG + T +S + +A Q+P + W+ P R FS ++ I
Sbjct: 432 TSTFSGRVTATAWSSTSDLALLRQIPLSVWSSYDYCLLPDQRCSDFSHYLYFNVVGLITR 491
Query: 154 VICFSTTSNKVTWYPTEANNIAHDLPISPLPTIPTFS 44
C T+ ++W+ + N + D PT TFS
Sbjct: 492 HDCERTSGYAISWWSSYGNCLVLDKRCGVPPTTSTFS 528
>06_01_0558 -
3968211-3969475,3970198-3970266,3970374-3970529,
3971075-3971405
Length = 606
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 169 SAIASVICFSTTSNKVTWYPTEANNIAHDLPISPLPTIPTFSDLNL 32
S + S+I ST + ++W N ++ DLP+ T P S LNL
Sbjct: 355 SFVGSLILPSTVNQNLSWLDASYNRLSGDLPVDINITFPNLSYLNL 400
>05_05_0252 -
23621592-23621912,23621958-23622317,23622979-23623059,
23623262-23623633
Length = 377
Score = 30.7 bits (66), Expect = 0.99
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 498 IVPAPWTKPEVTKKTRAIMEEIGQEPVT 581
IVPAPW++P K +AI+++ G+ T
Sbjct: 282 IVPAPWSRPLSEKVIKAILKDNGETKTT 309
>11_01_0605 + 4821363-4823246
Length = 627
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 376 VLSSTTLSKFWNTFFLSSKFSGTHSCTKIASLTAIAKSQVP 254
+LSS +K WNT ++SG H C+ +AS + + +P
Sbjct: 51 ILSSVGSTKNWNTCSNPCQWSGVH-CSSVASSAFVTRLSLP 90
>04_04_0590 +
26457514-26457801,26458849-26459325,26459817-26460027,
26460219-26460376,26460461-26460531,26460707-26460812,
26460880-26460966,26461591-26462148,26462245-26462308,
26463352-26463485,26463568-26463621,26464321-26464417,
26465620-26465825,26465901-26465984,26466265-26466330,
26466883-26466956,26467664-26467751,26467830-26467928
Length = 973
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 152 NLLLNNIEQSYLVSD*SEQHSP*SPDQSTPNNSNFFRFKLGSHDDT 15
N+ L N+ + +L SD + + +NSN FR+ GS DDT
Sbjct: 761 NMSLRNLAEKFLTSDPDKMMI--LKENGFSSNSNSFRYSGGSRDDT 804
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 48 KVGIVGSGLIGRSWAMLFASVGYQ-VTLFD 134
++GIVG+G G S A A +GY+ VTLF+
Sbjct: 23 RIGIVGAGPSGLSAAYALAKLGYRNVTLFE 52
>01_06_1626 -
38734128-38734160,38734386-38734560,38734819-38734878,
38734961-38735059,38735191-38735224,38735315-38735374,
38735596-38735696,38735949-38736014,38736695-38736825,
38736946-38737038,38737273-38737338,38737459-38737494,
38738308-38738382,38738475-38738792
Length = 448
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 283 LTAIAKSQVPFTHWNCSSAFRFPLRSPSFSKVFN 182
+ +A S++ HW+ A FP+ PS+ K++N
Sbjct: 188 IDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLWN 221
>11_01_0606 + 4831102-4833033
Length = 643
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 364 TTLSKFWNTFFLSSKFSGTHSCTKIASLTAIAKSQVP 254
++L+K WNT ++SG H CT AS + + + +P
Sbjct: 61 SSLTKSWNTSSNPCEWSGVH-CTSAASSSFVTRLSLP 96
>03_01_0110 - 865605-866004,866094-866712,867659-867863
Length = 407
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +3
Query: 462 PVNPPYYVPL---VEIVPAPWTKPE 527
PV PP Y+ L ++VP PW +PE
Sbjct: 317 PVKPPTYLRLNSKAQLVPNPWRQPE 341
>11_01_0194 + 1539847-1541533,1541650-1541730,1541773-1542335
Length = 776
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 613 DKDESIYSLDRVTGSWPISSM 551
D + +YSLD VTG+W +S M
Sbjct: 280 DGNLRLYSLDEVTGTWSVSWM 300
>06_01_1186 -
10195175-10195621,10195882-10195930,10196019-10196168,
10196513-10196658,10196877-10196914,10197000-10197216,
10197393-10197611,10197753-10197879,10198631-10198812,
10198928-10199131,10199773-10199782,10200789-10200815,
10201072-10201132,10201731-10201851
Length = 665
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 123 TLFDVVEKQITDAIADIKVQ-LKTLEKDGLLRGNLNADEQFQCVKGTCDLAIAVKDAIFV 299
+LFD K++TD +I+V ++ L+K L N + E + +K CD + ++ + V
Sbjct: 348 SLFDEFLKRLTDRAVEIRVSVIEHLKK--CLMSNHSRPEAQEIIKALCDRLLDYEENVSV 405
Query: 300 QECVPENL 323
+ E L
Sbjct: 406 KCYTMERL 413
>06_01_1076 - 8778210-8778734
Length = 174
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +3
Query: 462 PVNPPYYVPL---VEIVPAPWTKPE 527
PV PP Y+ L ++VP PW +PE
Sbjct: 115 PVKPPTYLRLNSKPQLVPNPWRQPE 139
>03_06_0410 -
33728507-33729415,33729511-33729654,33730054-33730920,
33731371-33731913
Length = 820
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 244 WNCSSAFRFPLRSPSFSKVFNCTLISAIASVICFSTTSN 128
+ CSS R P R PS+S + ++ S CF+TTS+
Sbjct: 586 YTCSSVIRTPRRVPSWSCISRENSTGSL-SEDCFATTSS 623
>07_03_0344 - 16976854-16977186,16978920-16979000
Length = 137
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +3
Query: 423 ENMKHKAQV--IVSHPVNPPYYVPLVEIVPA 509
+ +K+KA + +V+HP NP + P ++++PA
Sbjct: 22 KTLKYKAVLDYLVAHPPNPVFVGPRLDVMPA 52
>04_04_0579 -
26355431-26355684,26355988-26356073,26356292-26356377,
26356596-26356788,26356895-26357094,26359257-26359379
Length = 313
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 253 FTHWNCSSAF-RFPLRSPSFSKVFNCTLISAIASVICFSTTSNKVTWYP 110
F ++ C S + R PL + +N +S ++S+ ++ V WYP
Sbjct: 155 FQYFECDSPYERMPLADKVYELCYNFPPLSYLSSIELSPSSWMSVFWYP 203
>01_01_0174 - 1496543-1496596,1496686-1498131,1498928-1499341
Length = 637
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 190 VFNCTLISAIASVICFSTTSNKVTWYPTEANNIAHDLPISPLP 62
+ NC S I S IC + ++ W + N+ + P PLP
Sbjct: 42 ILNCKSDSLIPSYICSVISKSRWGWASDDPNDDEYTPPDHPLP 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,218,455
Number of Sequences: 37544
Number of extensions: 320082
Number of successful extensions: 957
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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