Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B06
         (185 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K02765-1|AAA85332.1| 1663|Homo sapiens complement component C3 p...    28   4.6  
BC150200-1|AAI50201.1| 1663|Homo sapiens complement component 3 ...    28   4.6  
BC150179-1|AAI50180.1| 1663|Homo sapiens complement component 3 ...    28   4.6  
AY513239-1|AAR89906.1| 1663|Homo sapiens complement component 3 ...    28   4.6  

>K02765-1|AAA85332.1| 1663|Homo sapiens complement component C3
           protein.
          Length = 1663

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 76  FCTLFFTERMHSWAVVIVPRI*LAITYVM 162
           FC+L  T+R H   V I P+  L++ YV+
Sbjct: 872 FCSLATTKRRHQQTVTIPPKSSLSVPYVI 900


>BC150200-1|AAI50201.1| 1663|Homo sapiens complement component 3
           protein.
          Length = 1663

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 76  FCTLFFTERMHSWAVVIVPRI*LAITYVM 162
           FC+L  T+R H   V I P+  L++ YV+
Sbjct: 872 FCSLATTKRRHQQTVTIPPKSSLSVPYVI 900


>BC150179-1|AAI50180.1| 1663|Homo sapiens complement component 3
           protein.
          Length = 1663

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 76  FCTLFFTERMHSWAVVIVPRI*LAITYVM 162
           FC+L  T+R H   V I P+  L++ YV+
Sbjct: 872 FCSLATTKRRHQQTVTIPPKSSLSVPYVI 900


>AY513239-1|AAR89906.1| 1663|Homo sapiens complement component 3
           protein.
          Length = 1663

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 76  FCTLFFTERMHSWAVVIVPRI*LAITYVM 162
           FC+L  T+R H   V I P+  L++ YV+
Sbjct: 872 FCSLATTKRRHQQTVTIPPKSSLSVPYVI 900


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,692,958
Number of Sequences: 237096
Number of extensions: 472097
Number of successful extensions: 722
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 76,859,062
effective HSP length: 41
effective length of database: 67,138,126
effective search space used: 1342762520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)