Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B06
         (185 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   5.4  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        19   7.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    18   9.5  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 53   CHSQTKNTFVHYFLLNECTHGQWSLFL 133
            C+S     FV + L  E  HG   L L
Sbjct: 1071 CYSPNDEDFVLHSLAVELEHGAAGLRL 1097


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 8   YDLTPKPPATQ 40
           Y+LTP  P+ Q
Sbjct: 222 YNLTPNQPSAQ 232


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 33  AGGFGVRSY 7
           AGG G RSY
Sbjct: 600 AGGGGARSY 608


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,272
Number of Sequences: 438
Number of extensions: 899
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 41
effective length of database: 128,385
effective search space used:  2567700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)