Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B05
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    42   4e-06
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       36   2e-04
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    23   2.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 41.9 bits (94), Expect = 4e-06
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +3

Query: 36  CSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQM 146
           C   PC+NGGTC   + S   ++C CP GF G +C++
Sbjct: 188 CDSAPCQNGGTCLDLIGS---YSCKCPKGFQGQNCEL 221



 Score = 41.1 bits (92), Expect = 7e-06
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +3

Query: 30  DPCSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQMPLQLLQS 167
           + C+   C NGGTC   +NS I   C C  GF G++CQ  + L  S
Sbjct: 25  EDCTETSCMNGGTCIDGINSYI---CTCKPGFTGSNCQNRINLCDS 67



 Score = 40.7 bits (91), Expect = 9e-06
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 30  DPCSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQM 146
           D C   PC+NGGTC   +NS    +C CP G  G  C++
Sbjct: 224 DDCKPNPCQNGGTCHDLVNS---FSCSCPSGTLGYICEI 259



 Score = 40.7 bits (91), Expect = 9e-06
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 36  CSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQM 146
           C   PC+NGG CR  ++    + CDCP G  G +C++
Sbjct: 380 CDSNPCQNGGVCR--ISDGGGYICDCPSGTNGTNCEI 414



 Score = 39.5 bits (88), Expect = 2e-05
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 36  CSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQ 143
           C+  PC+NGG C         H C CP GF G +C+
Sbjct: 342 CATSPCQNGGVCT---TIHAGHKCTCPEGFYGKNCE 374



 Score = 37.9 bits (84), Expect = 6e-05
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 36  CSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASC 140
           C   PC NG TC+   +   ++TC CP G+ G  C
Sbjct: 65  CDSSPCLNGATCQ---DHTTHYTCHCPYGYTGKDC 96



 Score = 33.9 bits (74), Expect = 0.001
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 24  YSDPCSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQMPL 152
           Y D CS  PC N  TC   + ++  + C C +G+ G  C + +
Sbjct: 99  YVDWCSTNPCENQATC---VQNKNQYQCLCGVGWTGKVCDVEM 138



 Score = 32.7 bits (71), Expect = 0.002
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +3

Query: 30  DPCSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQ 143
           D C    C N GTC   L+      C CP GF G  C+
Sbjct: 262 DDCRPGACHNNGTC---LDKVGGFECKCPPGFVGPRCE 296



 Score = 32.3 bits (70), Expect = 0.003
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +3

Query: 21  GYSDPCSLRPCRNGGTCRPDLNSRIN-HTCDCPLGFAGASCQ 143
           G  + C   PC N GT   D    +N + C+C LGF G  C+
Sbjct: 297 GDINECLSNPCSNAGTL--DCVQLVNDYHCNCKLGFMGRHCE 336



 Score = 31.9 bits (69), Expect = 0.004
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +3

Query: 96  NHTCDCPLGFAGASCQ 143
           ++TC CPLGF+G +CQ
Sbjct: 6   SYTCTCPLGFSGINCQ 21



 Score = 29.9 bits (64), Expect = 0.017
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +3

Query: 42  LRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQMPLQLLQSVGFSGNG 188
           L+   N GTC    NS   H C C  G++G+ CQ  +    S      G
Sbjct: 152 LKKLCNNGTCEDIGNS---HRCHCSDGYSGSYCQTEINECDSAPCQNGG 197


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 36.3 bits (80), Expect = 2e-04
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 36  CSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQM 146
           C + PC NGGTC   +N+     C C  G+ GA C +
Sbjct: 72  CKVNPCENGGTCVDKINA---FQCICKEGWEGALCNI 105



 Score = 35.5 bits (78), Expect = 3e-04
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 27  SDPCSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQM 146
           +D CS  PCRN G+C   ++   +  C+C  G+ G +C +
Sbjct: 107 TDDCSPNPCRNNGSC---VDRIADFECNCKNGWKGKTCSL 143



 Score = 27.5 bits (58), Expect = 0.088
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 36  CSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGAS 137
           C    C+NGGTC+ DL       C CP  + G +
Sbjct: 148 CDHTTCKNGGTCQ-DLGK--TFMCRCPPDWEGTT 178



 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 93  INHTCDCPLGFAGASC 140
           + H C C  GF G  C
Sbjct: 50  VGHRCQCQPGFTGKYC 65


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 208 NCYVTMIYNQNLQLLRSLFIQPTMVYFY 291
           NC V  +Y +NL+   +   QP + + +
Sbjct: 54  NCLVLNVYTKNLRTDTNRITQPVLFWIH 81


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/56 (23%), Positives = 19/56 (33%)
 Frame = +3

Query: 72  RPDLNSRINHTCDCPLGFAGASCQMPLQLLQSVGFSGNGYVELPAELLRYDDLQSE 239
           RP   SR       P+GF     Q   +  ++V        E P    +  D  S+
Sbjct: 48  RPSFKSRKPKNYSAPIGFVAGGVQQAGKKPENVKKEDESDEEKPTTSFKLKDSSSD 103


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 184 TDMSNYLRNCYVTMIYN 234
           TD+S ++ N Y  + YN
Sbjct: 57  TDLSYFISNVYQILAYN 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,162
Number of Sequences: 336
Number of extensions: 3065
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)