Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B05
         (584 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.11 
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    24   3.2  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   4.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.6  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   9.6  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 29.1 bits (62), Expect = 0.11
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 36  CSLRPCRNGGTCRPDLNSRINHTCDCPLGFAGASCQM 146
           C   PC N G C       +    +CP+G+ G  C++
Sbjct: 773 CKRCPCPNNGACMQMAGDTVI-CLECPVGYFGPRCEL 808


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = +3

Query: 54  RNGGTCRPDLNSRINHTCDCPLGFA----GASCQ-MPLQL 158
           +NGG     L +  +++C CP+G      G +C+  PLQL
Sbjct: 7   KNGGCSYICLLNPTSYSCACPIGIQLKDNGKTCKSWPLQL 46


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 144 MPLQLLQSVGFSGNGYVE 197
           +P QLL+SV  S N YV+
Sbjct: 282 LPSQLLKSVPLSSNDYVD 299


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 140  SNAFAITSKCRLQRQR 187
            ++A AI S+C LQRQR
Sbjct: 1405 TDAEAIDSECDLQRQR 1420


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 105 CDCPLGFAGASCQMPLQLLQS 167
           C C +G+ G +C+  LQ  Q+
Sbjct: 492 CQCYVGWIGKTCECNLQNSQN 512


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,756
Number of Sequences: 2352
Number of extensions: 12107
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)