Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B04
         (529 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ224676-1|CAA12058.1|  687|Drosophila melanogaster rho type GEF...    35   0.059
AY071298-1|AAL48920.1|  687|Drosophila melanogaster RE32772p pro...    33   0.24 
AE014134-3232|AAF53887.2|  687|Drosophila melanogaster CG10043-P...    33   0.24 
AE014134-3231|AAF53886.1|  687|Drosophila melanogaster CG10043-P...    33   0.24 
AY071128-1|AAL48750.1|  408|Drosophila melanogaster RE17417p pro...    28   6.8  
AE014296-3182|AAF49135.1|  408|Drosophila melanogaster CG9372-PA...    28   6.8  
AE014296-1378|AAF50482.1| 1417|Drosophila melanogaster CG7504-PA...    28   6.8  
AY118965-1|AAM50825.1|  422|Drosophila melanogaster LD44267p pro...    28   9.0  
AE014297-543|AAF54075.1|  422|Drosophila melanogaster CG1105-PA ...    28   9.0  

>AJ224676-1|CAA12058.1|  687|Drosophila melanogaster rho type GEF
           protein.
          Length = 687

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +1

Query: 175 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 327
           P S+   LPAG GR P  PS  P G S+ G+  +   P T + +  K++ +
Sbjct: 403 PPSSHILLPAG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452


>AY071298-1|AAL48920.1|  687|Drosophila melanogaster RE32772p
           protein.
          Length = 687

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 175 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 327
           P S+   LP G GR P  PS  P G S+ G+  +   P T + +  K++ +
Sbjct: 403 PPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452


>AE014134-3232|AAF53887.2|  687|Drosophila melanogaster CG10043-PB,
           isoform B protein.
          Length = 687

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 175 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 327
           P S+   LP G GR P  PS  P G S+ G+  +   P T + +  K++ +
Sbjct: 403 PPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452


>AE014134-3231|AAF53886.1|  687|Drosophila melanogaster CG10043-PA,
           isoform A protein.
          Length = 687

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 175 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQASN 327
           P S+   LP G GR P  PS  P G S+ G+  +   P T + +  K++ +
Sbjct: 403 PPSSHILLPPG-GRPPATPSSIPAGSSSGGSHSHQGSPATNSMSHHKRSQS 452


>AY071128-1|AAL48750.1|  408|Drosophila melanogaster RE17417p
           protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 187 STQLPAGPGRRPTEPSEWP 243
           S Q P   G RP EP EWP
Sbjct: 168 SRQFPRLTGGRPAEPDEWP 186


>AE014296-3182|AAF49135.1|  408|Drosophila melanogaster CG9372-PA
           protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 187 STQLPAGPGRRPTEPSEWP 243
           S Q P   G RP EP EWP
Sbjct: 168 SRQFPRLTGGRPAEPDEWP 186


>AE014296-1378|AAF50482.1| 1417|Drosophila melanogaster CG7504-PA
            protein.
          Length = 1417

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 504  RERHCQLISNQLKRTITINKEVEVRH 427
            +E+  QLISNQL   +T  +E E+ H
Sbjct: 1075 KEKKLQLISNQLSPPLTQREEFEISH 1100


>AY118965-1|AAM50825.1|  422|Drosophila melanogaster LD44267p
           protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 175 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTT 294
           PS+  ++ P+    +P  P+  PGG    GA  +N+  +T
Sbjct: 323 PSAVQSEDPSLAPTQPVSPASPPGGDGVGGALGWNVADST 362


>AE014297-543|AAF54075.1|  422|Drosophila melanogaster CG1105-PA
           protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 175 PSSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTT 294
           PS+  ++ P+    +P  P+  PGG    GA  +N+  +T
Sbjct: 323 PSAVQSEDPSLAPTQPVSPASPPGGDGVGGALGWNVADST 362


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,001,790
Number of Sequences: 53049
Number of extensions: 311796
Number of successful extensions: 1360
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)