Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_B04
(529 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036693-5|AAK29787.1| 434|Caenorhabditis elegans Hypothetical ... 30 0.89
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 29 2.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 2.1
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 29 2.1
AF036693-7|AAO61432.1| 343|Caenorhabditis elegans Hypothetical ... 29 2.1
AF036693-6|AAK29792.1| 428|Caenorhabditis elegans Hypothetical ... 29 2.1
AF099915-7|AAU05581.1| 468|Caenorhabditis elegans Hypothetical ... 28 3.6
AF099915-6|AAU05582.1| 471|Caenorhabditis elegans Hypothetical ... 28 3.6
AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical ... 28 4.8
AC024757-8|AAF59454.2| 215|Caenorhabditis elegans Hypothetical ... 28 4.8
AC024843-3|AAF60838.1| 110|Caenorhabditis elegans Hypothetical ... 27 8.3
>AF036693-5|AAK29787.1| 434|Caenorhabditis elegans Hypothetical
protein C49A9.5 protein.
Length = 434
Score = 30.3 bits (65), Expect = 0.89
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 431 GTDKNETLQRNQRAAVTASQPPKPGSHWLW 342
G ++T+ QRA VT+ +PG+++LW
Sbjct: 270 GFTTSQTIGEKQRAVVTSIDAKRPGTYYLW 299
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical
protein ZK512.3 protein.
Length = 1418
Score = 29.1 bits (62), Expect = 2.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 350 WLWCQWWWLEACF 312
W+W +WW+E CF
Sbjct: 788 WVWSFFWWIENCF 800
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 172 LPSSASTQLPAGPGRRPTEPSEWPGGRSTRG 264
+ S STQ+P G T+PS G ST G
Sbjct: 1149 MTSQGSTQIPGSTGSTVTQPSTGSGSTSTSG 1179
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 29.1 bits (62), Expect = 2.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 350 WLWCQWWWLEACF 312
W+W +WW+E CF
Sbjct: 397 WVWSFFWWIENCF 409
>AF036693-7|AAO61432.1| 343|Caenorhabditis elegans Hypothetical
protein C49A9.9b protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 431 GTDKNETLQRNQRAAVTASQPPKPGSHWLW 342
G ++T + QRA VT+ +PG ++LW
Sbjct: 273 GFTTSQTKEEKQRAVVTSIDEKRPGLYYLW 302
>AF036693-6|AAK29792.1| 428|Caenorhabditis elegans Hypothetical
protein C49A9.9a protein.
Length = 428
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 431 GTDKNETLQRNQRAAVTASQPPKPGSHWLW 342
G ++T + QRA VT+ +PG ++LW
Sbjct: 273 GFTTSQTKEEKQRAVVTSIDEKRPGLYYLW 302
>AF099915-7|AAU05581.1| 468|Caenorhabditis elegans Hypothetical
protein E02H9.3a protein.
Length = 468
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 431 GTDKNETLQRNQRAAVTASQPPKPGSHWLW 342
G ++T + QRA VT +PG ++LW
Sbjct: 313 GFTTSQTKEEKQRAVVTRIDEKRPGLYYLW 342
>AF099915-6|AAU05582.1| 471|Caenorhabditis elegans Hypothetical
protein E02H9.3b protein.
Length = 471
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 431 GTDKNETLQRNQRAAVTASQPPKPGSHWLW 342
G ++T + QRA VT +PG ++LW
Sbjct: 316 GFTTSQTKEEKQRAVVTRIDEKRPGLYYLW 345
>AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical
protein Y43H11AL.1 protein.
Length = 367
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 202 AGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAAKAEEKQAS 324
A R EPSE G ++T+ S+Y K + EE++ S
Sbjct: 207 ASSARSSMEPSECGGSQNTKKLSKYMKKKNEKMRKEEQKLS 247
>AC024757-8|AAF59454.2| 215|Caenorhabditis elegans Hypothetical
protein Y37E11AL.2 protein.
Length = 215
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 178 SSASTQLPAGPGRRPTEPSEWPGGRSTRGASRYNIKPTTAA 300
SS ST +PAG S +S++ S YN+ P A+
Sbjct: 2 SSTSTAIPAGEPVATAPSSAMSAAKSSKAPSVYNVVPFNAS 42
>AC024843-3|AAF60838.1| 110|Caenorhabditis elegans Hypothetical
protein Y61A9LA.7 protein.
Length = 110
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 449 IKKWKCGTDKNETLQRNQRAAVTASQPPKP 360
+++ K D+ E +R +RAA++AS P+P
Sbjct: 50 LQELKTAHDEFEAQRRGKRAAISASDKPEP 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,783,514
Number of Sequences: 27780
Number of extensions: 147341
Number of successful extensions: 542
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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