Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B03
         (469 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40870| Best HMM Match : No HMM Matches (HMM E-Value=.)              82   2e-16
SB_24591| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.63 
SB_50054| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.4  
SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.9  

>SB_40870| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 431

 Score = 82.2 bits (194), Expect = 2e-16
 Identities = 41/108 (37%), Positives = 59/108 (54%)
 Frame = +1

Query: 1   LILLERALKVIKQEKLIDLVNETGQFLKGGLHKLENEFPGLIHSVRGRGTFLAYNAPNTE 180
           +ILL   LKVI+++ LI+   + G+ L  GL  +E   P  +   RG GTF   + P+ E
Sbjct: 312 MILLREVLKVIRKDNLIEYTADVGKELLKGLQYIEERHPEFVSKARGLGTFCGIDLPDLE 371

Query: 181 TRDKINNKMKQNGVLGGTCGEVAIRLRPALIFQKKHAEIYLDALRKTL 324
           TR K    M+ NGV    CG   +R RPALIF  KH ++ ++ +   L
Sbjct: 372 TRTKFLGLMRNNGVDMDGCGVKTVRFRPALIFGHKHLDLAVNTMDSVL 419


>SB_24591| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 343

 Score = 30.7 bits (66), Expect = 0.63
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 31  IKQEKLIDLVNETGQFLKGGLHKLENEFPGLIHSVRGRG 147
           I  E L +  +  G     GL KL++EFP  +  VRG+G
Sbjct: 288 IDNEGLQENCSTVGTRFLRGLRKLQDEFPDFVGDVRGKG 326


>SB_50054| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 937

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
 Frame = +1

Query: 202 KMKQNGVLGGTCGEVAIRLRPAL---------IFQKKHAEIYLDALRKTLK 327
           KMK NGV GGT  EV  R +P +           +KKH+   L+  RK  K
Sbjct: 80  KMKSNGVYGGTLAEV--RHKPTMSDKHIPLHTTLKKKHSPTKLENTRKNTK 128


>SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 224

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 109 EFPGLIHSVRGRGTFLAYNAPNTETRDKINNK 204
           EF   + S    GT  A N  N +TRD++NN+
Sbjct: 38  EFMKHVESCYSAGTRDAVNNNNRDTRDRVNNR 69


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,029,738
Number of Sequences: 59808
Number of extensions: 230070
Number of successful extensions: 579
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 969807871
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)