Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_B02
         (572 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g33150.2 68417.m04723 lysine-ketoglutarate reductase/saccharo...   109   1e-24
At4g33150.1 68417.m04722 lysine-ketoglutarate reductase/saccharo...   109   1e-24
At1g62340.1 68414.m07034 subtilisin-like serine protease / abnor...    31   0.72 
At4g03070.1 68417.m00415 2-oxoglutarate-dependent dioxygenase (A...    30   0.95 
At2g17900.1 68415.m02073 zinc finger (MYND type) family protein ...    28   5.1  
At1g08920.2 68414.m00993 sugar transporter, putative similar to ...    28   5.1  
At1g08920.1 68414.m00992 sugar transporter, putative similar to ...    28   5.1  
At1g32330.1 68414.m03983 heat shock transcription factor family ...    27   8.9  

>At4g33150.2 68417.m04723 lysine-ketoglutarate
           reductase/saccharopine dehydrogenase bifunctional enzyme
           identical to lysine-ketoglutarate reductase/saccharopine
           dehydrogenase GI:2052508 from [Arabidopsis thaliana]
          Length = 1064

 Score =  109 bits (262), Expect = 1e-24
 Identities = 61/160 (38%), Positives = 84/160 (52%)
 Frame = +2

Query: 2   DHEEYEEHPERYISTFAQKIAPYTSVLVNCIYWAVESPKLLTIPDAKHLLLPSHTPWLPR 181
           D  +Y  HPE Y   F +KI+PYTSVLVNC+YW    P LL+    K L          +
Sbjct: 289 DKADYYAHPEHYNPVFHEKISPYTSVLVNCMYWEKRFPCLLS---TKQL----------Q 335

Query: 182 SIGAPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDADRNKDTKSFKGPGVLVC 361
            +    LP  ++ ICDI+ D GGSIEF+N  T ID+PF  ++   N       G GVL  
Sbjct: 336 DLTKKGLP--LVGICDITCDIGGSIEFVNRATLIDSPFFRFNPSNNSYYDDMDGDGVLCM 393

Query: 362 SIDNMPTQLPREATDFFGDLLFPYAEDIMSSDATKPLEDH 481
           ++D +PT+  +EA+  FGD+L  +   + S      L  H
Sbjct: 394 AVDILPTEFAKEASQHFGDILSGFVGSLASMTEISDLPAH 433


>At4g33150.1 68417.m04722 lysine-ketoglutarate
           reductase/saccharopine dehydrogenase bifunctional enzyme
           identical to lysine-ketoglutarate reductase/saccharopine
           dehydrogenase GI:2052508 from [Arabidopsis thaliana]
          Length = 1064

 Score =  109 bits (262), Expect = 1e-24
 Identities = 61/160 (38%), Positives = 84/160 (52%)
 Frame = +2

Query: 2   DHEEYEEHPERYISTFAQKIAPYTSVLVNCIYWAVESPKLLTIPDAKHLLLPSHTPWLPR 181
           D  +Y  HPE Y   F +KI+PYTSVLVNC+YW    P LL+    K L          +
Sbjct: 289 DKADYYAHPEHYNPVFHEKISPYTSVLVNCMYWEKRFPCLLS---TKQL----------Q 335

Query: 182 SIGAPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDADRNKDTKSFKGPGVLVC 361
            +    LP  ++ ICDI+ D GGSIEF+N  T ID+PF  ++   N       G GVL  
Sbjct: 336 DLTKKGLP--LVGICDITCDIGGSIEFVNRATLIDSPFFRFNPSNNSYYDDMDGDGVLCM 393

Query: 362 SIDNMPTQLPREATDFFGDLLFPYAEDIMSSDATKPLEDH 481
           ++D +PT+  +EA+  FGD+L  +   + S      L  H
Sbjct: 394 AVDILPTEFAKEASQHFGDILSGFVGSLASMTEISDLPAH 433


>At1g62340.1 68414.m07034 subtilisin-like serine protease / abnormal
           leaf shape1 (ALE1) identical to subtilisin-like serine
           protease [Arabidopsis thaliana] GI:16444944
          Length = 832

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -3

Query: 336 KLLVSLFLSAS*RQKGVSIVVHSFMNSIEP-PGSADMSQIASILCGNAGAPILL 178
           K++ + F SA  R  G    ++S ++ + P   S   S +ASI  GNAG P+++
Sbjct: 220 KIISARFFSAGARASGA---LNSSLDILSPFDASGHGSHVASIAAGNAGVPVIV 270


>At4g03070.1 68417.m00415 2-oxoglutarate-dependent dioxygenase
           (AOP1.2) identical to GI:16118887; contains PF03171:
           2OG-Fe(II) oxygenase superfamily domain
          Length = 322

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = -2

Query: 475 FQGFSCVRTHYILSVREEKITEEISSFTRQL-----RRHVVNRTHQYSRTFKALSILVSV 311
           F G+ C   +  L + +  + E+++ FT+QL      + +    H +S     L ++V  
Sbjct: 87  FHGYLCHNLYESLGINDANVLEKVNDFTQQLWPDHGNKSISETIHLFSEQLVELDLMVRR 146

Query: 310 CIIET 296
            I+E+
Sbjct: 147 MIMES 151


>At2g17900.1 68415.m02073 zinc finger (MYND type) family protein /
           SET domain-containing protein contains Pfam profiles
           PF00856: SET domain,  PF01753: MYND zinc finger (ZnF)
           domain; confirmed by cDNA (Paola Vittorioso--accession
           not assigned yet (paola.vittorioso@uniroma1.it)
          Length = 480

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 267 MSVQLLIHLSVSMMQTETRILRALKVLEYWCVRLTTCR 380
           + V+L    S+ +M+T  ++L+ L  +E W   L  CR
Sbjct: 362 LQVKLYHSFSIPLMRTREKLLKMLMDVEIWREALNYCR 399


>At1g08920.2 68414.m00993 sugar transporter, putative similar to
           ERD6 protein {Arabidopsis thaliana} GI:3123712,
           sugar-porter family proteins 1 and 2 [Arabidopsis
           thaliana] GI:14585699, GI:14585701; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 477

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -3

Query: 168 GVCDGRSKCFASGIVNSLGLSTAQ*IQF----TRTDVYGAIFCANV 43
           G   G S    +GI+N LGLS AQ   F    T   + GAIF   V
Sbjct: 47  GCAAGYSSVAQTGIINDLGLSVAQYSMFGSIMTFGGMIGAIFSGKV 92


>At1g08920.1 68414.m00992 sugar transporter, putative similar to
           ERD6 protein {Arabidopsis thaliana} GI:3123712,
           sugar-porter family proteins 1 and 2 [Arabidopsis
           thaliana] GI:14585699, GI:14585701; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 470

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = -3

Query: 168 GVCDGRSKCFASGIVNSLGLSTAQ*IQF----TRTDVYGAIFCANV 43
           G   G S    +GI+N LGLS AQ   F    T   + GAIF   V
Sbjct: 47  GCAAGYSSVAQTGIINDLGLSVAQYSMFGSIMTFGGMIGAIFSGKV 92


>At1g32330.1 68414.m03983 heat shock transcription factor family
           protein contains Pfam profile: PF00447 HSF-type
           DNA-binding domain
          Length = 485

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +2

Query: 38  ISTFAQKIAPYTSVLVNCIYWAVESPKLLTIPDAKHLLLPSHTPWLPRSIGAPAL 202
           I T  + ++  +    NCI     SP  LT+PD  H+L  +++   P S   P L
Sbjct: 340 IETTPENVSAASEATENCI----PSPDDLTLPDFTHMLPENNSEKPPESFMEPNL 390


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,260,688
Number of Sequences: 28952
Number of extensions: 288069
Number of successful extensions: 770
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)