Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_B01
(317 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0398 + 3092577-3093857 105 8e-24
11_04_0019 + 12311674-12311886,12312746-12312878,12312918-123131... 28 1.4
12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776 28 1.8
03_05_0510 + 25039408-25039455,25040627-25040641,25040832-250409... 28 1.8
05_06_0153 - 26019377-26020813 27 2.4
04_04_1125 + 31085106-31085714 27 2.4
01_01_0419 - 3146851-3147339,3148428-3148663,3148847-3149793,315... 27 2.4
03_02_0913 + 12344096-12344125,12344284-12345970,12346243-123465... 26 5.6
12_02_0143 - 14354323-14354463,14354733-14354837,14355515-143558... 26 7.4
12_01_1083 - 11268130-11268290,11268330-11268585,11268946-11269551 26 7.4
10_01_0020 + 239026-239514 26 7.4
08_01_0606 - 5321751-5321819,5321950-5322192,5322279-5322377,532... 26 7.4
07_03_0169 + 14670994-14673714,14673799-14673879,14675460-146756... 26 7.4
07_01_0979 - 8270980-8271654,8271984-8272088 26 7.4
03_01_0250 - 1937650-1939071,1939375-1939468,1939665-1939870,193... 26 7.4
01_01_1209 - 9738501-9738516,9738703-9739161,9739389-9739608,973... 26 7.4
06_01_0834 - 6306469-6306519,6306754-6306857,6307069-6307126,630... 25 9.7
06_01_0096 - 794148-794246,795682-796975,798960-799417 25 9.7
05_04_0036 + 17386160-17386318,17386588-17386651,17387089-173871... 25 9.7
05_01_0003 + 29476-29847,30192-31519,31612-31722,31836-32112,322... 25 9.7
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 25 9.7
02_04_0472 - 23195320-23195486,23195614-23195698 25 9.7
02_03_0292 - 17358129-17358213,17358462-17358541,17358627-173587... 25 9.7
01_05_0218 - 19430404-19431189 25 9.7
>03_01_0398 + 3092577-3093857
Length = 426
Score = 105 bits (252), Expect = 8e-24
Identities = 52/98 (53%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Frame = +1
Query: 28 RHVDIPDQSTWNLDPNASYVHICANETIHGVEFDFIPDTKGVP--LVADMSSNFMSKKVD 201
++ +P +P A ++HIC+NETIHGVEF P+ K LVADMSSNF SK VD
Sbjct: 188 KYTSLPPFDAIEQNPEARFLHICSNETIHGVEFKDYPEPKNKSGILVADMSSNFCSKPVD 247
Query: 202 VSKFGVIYGGAQKNIGTSGVALVIVREDLPESSFTYMP 315
VS+FG+IY GAQKN+G SGV + IVR+DL S+ P
Sbjct: 248 VSRFGLIYAGAQKNVGPSGVTIAIVRKDLVGSAQPITP 285
>11_04_0019 +
12311674-12311886,12312746-12312878,12312918-12313125,
12313342-12313558,12313564-12313848
Length = 351
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -1
Query: 194 FFDIKFDDISATSGTPFVSGIKSNSTPCMVSFAHIC-TYEALGSKFH 57
+FD+KF I+ +PF ++ + F IC TY G F+
Sbjct: 29 YFDLKFSLITMAQASPFCGKPNEDANAHLQQFLEICSTYTIKGLSFN 75
>12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776
Length = 320
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 194 FFDIKFDDISATSGTPFVSGIKSNSTP 114
FF I+ DD++A G + +++ STP
Sbjct: 177 FFSIEIDDLTAPPGVEIIDFLEARSTP 203
>03_05_0510 +
25039408-25039455,25040627-25040641,25040832-25040991,
25041116-25041192,25041324-25042528,25042537-25042621,
25043068-25043130,25043207-25043263,25043299-25043361,
25043560-25043643,25043730-25044320,25044535-25044663
Length = 858
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -1
Query: 176 DDISATSGTPFVSGIKSNSTPCMVSFAHICTYEALGSKFHV 54
+++ +PF S + ST C+ + H C + +KFH+
Sbjct: 460 EEVDGVKRSPF-SRFFAASTSCLEKYQHFCQFYEFCAKFHL 499
>05_06_0153 - 26019377-26020813
Length = 478
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 267 KRYTG-CTNIFLGSTVYYSKLRYINFLRH 184
+RYT C+N FL +TV + R +N LRH
Sbjct: 205 RRYTNKCSNGFLVNTVDSLEARVVNTLRH 233
>04_04_1125 + 31085106-31085714
Length = 202
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 275 TMTSATPDVPIFFWAPPYITPNLDTST 195
T T ATP P W PP TP T T
Sbjct: 50 TPTPATPTTPPTPWTPPPATPTPPTPT 76
>01_01_0419 -
3146851-3147339,3148428-3148663,3148847-3149793,
3150258-3150356,3151128-3151501
Length = 714
Score = 27.5 bits (58), Expect = 2.4
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +1
Query: 73 NASYVHICANETIHGVEFDFIPDTKGVPLVADMSSNFMSKKVDVSKFGVIYGGAQKNIGT 252
N + VHI N I+G +F PD+ L+ S+NF S + S G K++
Sbjct: 358 NLTTVHISYNTNIYGSLPNFSPDSSLTTLIVS-STNF-SGPIPSSI------GNLKSLNE 409
Query: 253 SGVALVIVREDLPES 297
GVA R++LP S
Sbjct: 410 LGVASNDFRQELPSS 424
>03_02_0913 + 12344096-12344125,12344284-12345970,12346243-12346573,
12346712-12347567,12347760-12347883,12348469-12348688,
12348771-12349229,12349318-12349519
Length = 1302
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 8 WFYQRLIVMSIYRISQRGTWILMPHMYI 91
W YQR+ M +Y + ++LM YI
Sbjct: 1058 WNYQRIAYMILYNFYRNAVFVLMLFWYI 1085
>12_02_0143 -
14354323-14354463,14354733-14354837,14355515-14355815,
14356065-14356261,14356412-14356940,14357842-14358848
Length = 759
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 191 FDIKFDDISATSGTPFVSGIKSNSTPCMVSFAHIC-TYEALG 69
FD+K I+ +PF +K ++ + F IC TY G
Sbjct: 77 FDLKSSLITMVQASPFCGKLKEDANAHLQQFLEICSTYTIKG 118
>12_01_1083 - 11268130-11268290,11268330-11268585,11268946-11269551
Length = 340
Score = 25.8 bits (54), Expect = 7.4
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -1
Query: 266 SATPDVPIFFWAPPYITPNLDTSTFFDIKFDDISATSGTPFVSGIKSNSTPCMVSFAHIC 87
SA P V P ++D FD+K I+ T +PF S ++ + F IC
Sbjct: 9 SAAPSVDNMATGPQINMGDMD----FDLKSSLITMTQASPFCSKPDDDANANLQQFLEIC 64
Query: 86 -TYEALG 69
TY G
Sbjct: 65 STYTMKG 71
>10_01_0020 + 239026-239514
Length = 162
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 213 WSNIRWSPKKYWYIRCSACHCQR 281
+S RW ++ I S+CHCQR
Sbjct: 75 YSGQRWQRERSVVIPRSSCHCQR 97
>08_01_0606 -
5321751-5321819,5321950-5322192,5322279-5322377,
5322463-5322942,5323069-5323167,5323306-5323427,
5323517-5323635,5323734-5323801,5323889-5324074,
5324169-5324244,5324339-5324418,5324505-5324561,
5324980-5325122,5325208-5325352,5325652-5325813,
5325893-5326078,5326263-5326355,5326437-5326597,
5327005-5327109,5328263-5328278
Length = 902
Score = 25.8 bits (54), Expect = 7.4
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = +1
Query: 40 IPDQSTWNLDPNASYVH 90
+P+ S ++ DPN++Y+H
Sbjct: 636 VPEASLYSWDPNSTYIH 652
>07_03_0169 + 14670994-14673714,14673799-14673879,14675460-14675612,
14675910-14676073,14676162-14676309,14676426-14676548,
14676754-14676841,14677493-14677674
Length = 1219
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 154 PLVADMSSNFMSKKVDVSKFGVI 222
P + + SSN +S+KVDV FG++
Sbjct: 1117 PELLNGSSNKVSEKVDVFSFGIV 1139
>07_01_0979 - 8270980-8271654,8271984-8272088
Length = 259
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 213 WSNIRWSPKKYWYIRCSACHCQR 281
+S RW ++ I S+CHCQR
Sbjct: 228 YSGQRWQRERSVVIPRSSCHCQR 250
>03_01_0250 -
1937650-1939071,1939375-1939468,1939665-1939870,
1939986-1940132
Length = 622
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 67 DPNASYVHICANETIHGVEFDFIPDT 144
DPN S+V A+E + +E +IP T
Sbjct: 162 DPNFSHVWASASEALTSLEIGYIPMT 187
>01_01_1209 - 9738501-9738516,9738703-9739161,9739389-9739608,
9739708-9739831,9739927-9740635,9741826-9742132,
9742213-9743704
Length = 1108
Score = 25.8 bits (54), Expect = 7.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 8 WFYQRLIVMSIYRISQRGTWILMPHMYI 91
W YQR+ M +Y + T++L+ Y+
Sbjct: 926 WNYQRMSYMILYNFYKNATFVLVLFWYV 953
>06_01_0834 -
6306469-6306519,6306754-6306857,6307069-6307126,
6308533-6308560,6309028-6309080
Length = 97
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 64 LDPNASYVHICANETIHGVEFDFIPD 141
LD SY+ + +E + GVE++FI D
Sbjct: 57 LDMWCSYLKLSFSEILIGVEYEFIED 82
>06_01_0096 - 794148-794246,795682-796975,798960-799417
Length = 616
Score = 25.4 bits (53), Expect = 9.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 127 DFIPDTKGVPLVADMSSNFMSKKVDVSKFGVIYGGAQKN-IGTSGVALVI 273
DF PDTK + A S + MS ++K + G++ + +G SG++ I
Sbjct: 132 DFTPDTKYIVKGATCSIHEMSMYQRLTKHSIAIDGSRLSPLGWSGLSWAI 181
>05_04_0036 +
17386160-17386318,17386588-17386651,17387089-17387147,
17387268-17387343,17387521-17387592,17387786-17387873,
17387992-17388250,17388446-17388561,17388876-17389096,
17389196-17389224,17389285-17389420,17389567-17389651,
17389735-17389963
Length = 530
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -1
Query: 272 MTSATPDVPIFFWAPPYITPNLDTSTFF 189
+ T D+ FWA TP +T T+F
Sbjct: 359 LQDVTDDISSLFWASKNSTPTRETVTWF 386
>05_01_0003 +
29476-29847,30192-31519,31612-31722,31836-32112,
32233-33714
Length = 1189
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 145 KGVPLVADMSSNFMSKKVDVSKF 213
KG PL+ADM+SN + + F
Sbjct: 454 KGSPLIADMASNTQGSQAAIKGF 476
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 1 VNMVLPA-TDRHVDIPDQSTWNLDPNASY 84
V+ LP TD+ + D W+LDP +Y
Sbjct: 885 VSKSLPERTDKSTSLDDSKKWHLDPAKTY 913
>02_04_0472 - 23195320-23195486,23195614-23195698
Length = 83
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 109 WFRLRIYVHMRH*DPSSTLTDP 44
WF +R Y H R +P + DP
Sbjct: 62 WFMVRDYAHARRHEPRNNRLDP 83
>02_03_0292 -
17358129-17358213,17358462-17358541,17358627-17358797,
17359440-17359541,17360216-17360365,17360549-17360671,
17360781-17360867,17361209-17361289,17362071-17362210,
17363490-17363534,17365315-17365485,17365784-17365805
Length = 418
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 1 VNMVLPATDRHVDIPDQSTWNLDPNASYVHIC 96
V ++LP T R IP W++D SYV C
Sbjct: 241 VEILLPVTSR---IPSVCDWSVDGVISYVKSC 269
>01_05_0218 - 19430404-19431189
Length = 261
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = -1
Query: 230 PPYITPNLDTSTFFDIKFDDISATSGTPFVSGIKS------NSTPCM 108
PP IT L T I DD++ + P+ SG+ S STPC+
Sbjct: 202 PPCITRWLFKGTTCPICRDDLTGLAAAPWESGVMSCPGCIMPSTPCV 248
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,799,552
Number of Sequences: 37544
Number of extensions: 171374
Number of successful extensions: 502
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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