Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_B01
(317 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81516-3|CAB04204.1| 370|Caenorhabditis elegans Hypothetical pr... 108 7e-25
Z79598-4|CAB01868.2| 745|Caenorhabditis elegans Hypothetical pr... 33 0.059
Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical pr... 27 2.2
U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical pr... 27 2.9
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 26 6.8
Z99273-2|CAB16475.1| 117|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z83216-10|CAB62779.1| 117|Caenorhabditis elegans Hypothetical p... 25 8.9
Z82057-5|CAB04861.3| 325|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z81536-9|CAB04362.1| 733|Caenorhabditis elegans Hypothetical pr... 25 8.9
Z81142-11|CAB03512.3| 325|Caenorhabditis elegans Hypothetical p... 25 8.9
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 25 8.9
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 25 8.9
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 25 8.9
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 25 8.9
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 25 8.9
AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical... 25 8.9
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 25 8.9
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 25 8.9
AC006605-2|AAL00853.1| 139|Caenorhabditis elegans Hypothetical ... 25 8.9
>Z81516-3|CAB04204.1| 370|Caenorhabditis elegans Hypothetical
protein F26H9.5 protein.
Length = 370
Score = 108 bits (260), Expect = 7e-25
Identities = 48/97 (49%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 VNMVLPATDRHVDIPDQSTWNLDPNASYVHICANETIHGVEFD-FIPDTKGVPLVADMSS 177
V V + +V +PDQ W D A+Y++ CANET+HG+EF P++ VPLVAD+SS
Sbjct: 119 VKKVFQPSKPYVTVPDQENWVHDEKAAYLYYCANETVHGIEFTPTAPESHNVPLVADVSS 178
Query: 178 NFMSKKVDVSKFGVIYGGAQKNIGTSGVALVIVREDL 288
NFM++ D GV++GGAQKN+G +G+ +VIVR+DL
Sbjct: 179 NFMARPFDFKDHGVVFGGAQKNLGAAGLTIVIVRKDL 215
>Z79598-4|CAB01868.2| 745|Caenorhabditis elegans Hypothetical
protein C44H4.4 protein.
Length = 745
Score = 32.7 bits (71), Expect = 0.059
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +1
Query: 19 ATDRHVDIPDQSTWNLDPNASYVHICANETIHGVEFDFIPDTKGVPLVADMSSNFMSKKV 198
+TD H D+ +Q L+ HIC + +E D P TKG P + D+S N + +
Sbjct: 586 STDEHSDVKNQLINGLNK----FHICTSPV--WIEIDHGPQTKGFPFLHDVSFNGI-LAI 638
Query: 199 DVSKFGVIYGGAQ 237
D K V+ A+
Sbjct: 639 DKDKVNVLVEPAE 651
>Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical
protein ZK945.3 protein.
Length = 766
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 139 DTKGVPLVADMSSNFMSKKVDVSKFGVIYGGAQKNI 246
D + + +A+ SN SKK ++G +Y G +N+
Sbjct: 566 DKREITFLAEGDSNPHSKKTQKDRYGQLYAGITENL 601
>U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical
protein C25F6.4 protein.
Length = 767
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 224 YITPNLDTSTFFDIKFDDISATSGTPFVSGIKSNSTPCMVSFAHICTYEAL 72
Y+ N DT+T D S FV K+ T CM + H C +E +
Sbjct: 135 YMDGNFDTTTPVIRVLDPPIVASRIRFVPSSKNTRTVCMRAEIHGCKHEGV 185
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 76 ASYVHICANETIHG-VEFDFIPDTKGVPLVA 165
A Y +C+ TI + F+PDTKGV L A
Sbjct: 455 APYAVVCSIGTISLLISCVFLPDTKGVDLAA 485
>Z99273-2|CAB16475.1| 117|Caenorhabditis elegans Hypothetical
protein Y45F10C.2 protein.
Length = 117
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 27 SSCRYTGSVNVELGS*CLICTYMRK 101
+ C Y+G++ +++GS C Y +K
Sbjct: 47 TECTYSGTLELKIGSTCTFSIYEKK 71
>Z83216-10|CAB62779.1| 117|Caenorhabditis elegans Hypothetical
protein C08F11.12 protein.
Length = 117
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 27 SSCRYTGSVNVELGS*CLICTYMRK 101
+ C Y+G++ +++GS C Y +K
Sbjct: 47 TECTYSGTLELKIGSTCTFSIYEKK 71
>Z82057-5|CAB04861.3| 325|Caenorhabditis elegans Hypothetical
protein ZK1037.11 protein.
Length = 325
Score = 25.4 bits (53), Expect = 8.9
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +3
Query: 210 VWSNIRWSPKKYWYIRCSACHC 275
++ + + P+K+WY+ C C
Sbjct: 244 IYISAAYYPEKFWYVACKVWDC 265
>Z81536-9|CAB04362.1| 733|Caenorhabditis elegans Hypothetical
protein F40D4.12 protein.
Length = 733
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 85 VHICANETIHGVEFDFIPDTKGVPLV 162
+H+C N +EF+FI D P +
Sbjct: 145 LHVCFNSRALNIEFEFIYDRYETPAI 170
>Z81142-11|CAB03512.3| 325|Caenorhabditis elegans Hypothetical
protein ZK1037.11 protein.
Length = 325
Score = 25.4 bits (53), Expect = 8.9
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +3
Query: 210 VWSNIRWSPKKYWYIRCSACHC 275
++ + + P+K+WY+ C C
Sbjct: 244 IYISAAYYPEKFWYVACKVWDC 265
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 55 TWNLDPNASYVHICANETIHGVEF 126
T LD + YVH+C +GV F
Sbjct: 317 TSELDAKSKYVHLCRGLKTYGVTF 340
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 7 MVLPATDRHVDIPDQSTWNLDPNASYV 87
++ P T H++IP W +D +V
Sbjct: 290 LLTPKTSDHMEIPSGDQWTIDVKQKFV 316
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 7 MVLPATDRHVDIPDQSTWNLDPNASYV 87
++ P T H++IP W +D +V
Sbjct: 307 LLTPKTSDHMEIPSGDQWTIDVKQKFV 333
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 7 MVLPATDRHVDIPDQSTWNLDPNASYV 87
++ P T H++IP W +D +V
Sbjct: 419 LLTPKTSDHMEIPSGDQWTIDVKQKFV 445
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 185 IKFDDISATSGTPFVSGIKSNSTPCMVSFAH 93
+KFDD+ P +++ T ++ FAH
Sbjct: 923 LKFDDVKNVLNAPIYFSFRTDRTHALLFFAH 953
>AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical
protein Y71G12B.11b protein.
Length = 996
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 55 TWNLDPNASYVHICANETIHGVEF 126
T LD + YVH+C +GV F
Sbjct: 317 TSELDAKSKYVHLCRGLKTYGVTF 340
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 55 TWNLDPNASYVHICANETIHGVEF 126
T LD + YVH+C +GV F
Sbjct: 317 TSELDAKSKYVHLCRGLKTYGVTF 340
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 230 PPYITPNLDTSTFFDIKFDDISATSGTPFVSGIKSNSTPCM--VSFAHI 90
PP + N TS +FD I AT V+G++ +S C+ V FA +
Sbjct: 302 PPVVANNRPTSNYFDQPNPFIVAT-----VNGVQEHSRSCLNDVQFAFL 345
>AC006605-2|AAL00853.1| 139|Caenorhabditis elegans Hypothetical
protein C07H6.9 protein.
Length = 139
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 160 VADMSSNFMSKKVDVSKFGVIY 225
V +++NF+ VDVS FG IY
Sbjct: 63 VITITTNFIKMVVDVSCFGTIY 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,685,804
Number of Sequences: 27780
Number of extensions: 157127
Number of successful extensions: 465
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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