Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A24
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   3.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   3.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   6.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.0  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   6.0  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   8.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   8.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   8.0  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 137 LLSCGN*LETKPTTACHRSVCT 202
           L+ CG   +T+  T   R  CT
Sbjct: 115 LMCCGRGYKTQEVTVVERCACT 136


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = +1

Query: 154 LTRDETNYGLPQKRLYGHSHFISDVVLSSDG------NYALSGSWDKTLRLWDLAAGKTT 315
           LT+    +G+P   L+  +H +       DG      + +L+ + D  LR   ++A K +
Sbjct: 430 LTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALD-ALRTGTISANKAS 488

Query: 316 RRF 324
           + F
Sbjct: 489 KAF 491


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 277 FCPRNRKERNF 245
           FCP+N KE  +
Sbjct: 337 FCPKNNKELKY 347


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = -2

Query: 279 SFVPGTGKSVISITGQYNVRNEMGVTVQTLLW 184
           +F  G+ +++  +TG   + N++G   + +LW
Sbjct: 468 NFYNGSFRNLDQLTGLRLIGNDIGNLSRGMLW 499


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 105 RVFRISRNLSNPAIMATKRASEF*CFTHFYKSP 7
           R+F  S+N++       K    F  F  F K+P
Sbjct: 160 RIFTSSQNIAVIEYRIPKSGKGFSLFARFLKNP 192


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 247 FHHWTVQR 224
           F+HWTV R
Sbjct: 304 FNHWTVMR 311


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 90  SRNLSNPAIMATKRASEF*CFTHFYKS 10
           +R  S+P ++ T+  +EF     +YKS
Sbjct: 280 NRTNSDPRMILTEAYTEFNLTIKYYKS 306


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 321 TPGCLSSGKIPKPESFVPG 265
           TPGC S    P   +F  G
Sbjct: 892 TPGCSSKNGEPTSAAFAQG 910


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,783
Number of Sequences: 438
Number of extensions: 2353
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)