Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A24
(367 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 160 3e-40
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 157 3e-39
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 154 1e-38
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 60 3e-10
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 60 4e-10
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 60 4e-10
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 60 4e-10
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 58 1e-09
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 58 1e-09
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 58 2e-09
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 57 3e-09
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 57 3e-09
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 56 5e-09
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 56 1e-08
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 55 1e-08
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 55 1e-08
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 55 1e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 55 1e-08
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 54 2e-08
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 54 4e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 53 7e-08
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 52 1e-07
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 52 1e-07
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 52 1e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 52 1e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 51 2e-07
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 51 2e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 51 3e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 51 3e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 51 3e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 50 4e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 50 4e-07
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 50 6e-07
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 48 2e-06
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 48 3e-06
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 46 6e-06
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 46 8e-06
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 46 8e-06
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 46 1e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 46 1e-05
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 46 1e-05
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 46 1e-05
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 46 1e-05
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 45 1e-05
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 45 1e-05
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 45 1e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 45 2e-05
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 44 2e-05
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 44 2e-05
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 44 2e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 44 3e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 44 3e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 44 3e-05
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 44 3e-05
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 44 4e-05
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 44 4e-05
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 43 5e-05
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 43 5e-05
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 43 5e-05
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 43 5e-05
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 43 5e-05
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 43 7e-05
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 43 7e-05
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 42 9e-05
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 42 9e-05
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 41 2e-04
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 41 3e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 41 3e-04
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 41 3e-04
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 40 4e-04
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 40 4e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 40 4e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 40 4e-04
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 40 5e-04
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 40 5e-04
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 39 9e-04
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 39 9e-04
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 39 9e-04
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 39 9e-04
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 39 9e-04
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 39 0.001
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 39 0.001
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 39 0.001
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 38 0.002
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 38 0.002
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 38 0.002
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 37 0.002
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 38 0.002
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 38 0.002
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 38 0.002
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 38 0.002
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 38 0.002
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 38 0.002
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 38 0.003
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 38 0.003
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 37 0.004
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 37 0.004
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 37 0.004
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 37 0.004
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 37 0.005
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 37 0.005
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 37 0.005
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 36 0.006
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 36 0.006
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 36 0.006
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 36 0.008
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 36 0.008
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 36 0.008
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 36 0.011
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 36 0.011
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 36 0.011
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 36 0.011
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 36 0.011
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 35 0.019
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 34 0.025
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 34 0.025
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 34 0.025
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 34 0.025
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 34 0.025
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 34 0.025
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 34 0.025
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 34 0.033
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 34 0.033
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 34 0.033
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 34 0.033
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 34 0.033
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.033
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 34 0.033
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 33 0.044
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 33 0.044
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 33 0.044
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 33 0.044
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 33 0.044
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 33 0.044
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 33 0.044
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 33 0.058
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.077
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 33 0.077
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 32 0.10
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 32 0.10
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 32 0.10
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 32 0.10
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 32 0.10
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 32 0.10
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 32 0.13
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 32 0.13
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 32 0.13
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 32 0.13
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 32 0.13
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 32 0.13
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 32 0.13
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 32 0.13
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 31 0.18
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 31 0.18
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 31 0.18
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 31 0.18
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 31 0.18
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 31 0.18
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 31 0.18
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 31 0.18
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.23
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 31 0.23
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 0.23
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 31 0.23
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 31 0.23
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 31 0.31
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 31 0.31
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 31 0.31
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 31 0.31
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 31 0.31
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 31 0.31
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 31 0.31
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 31 0.31
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 31 0.31
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 0.41
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 30 0.41
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 30 0.41
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 30 0.41
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 30 0.41
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 30 0.54
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 30 0.54
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 30 0.54
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 30 0.54
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 29 0.72
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 29 0.72
At4g28620.1 68417.m04092 ABC transporter family protein identica... 29 0.72
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 29 0.95
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 0.95
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 0.95
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 29 0.95
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 29 0.95
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 29 0.95
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 29 0.95
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 29 0.95
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 29 0.95
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 29 1.3
At3g45370.1 68416.m04898 hypothetical protein 29 1.3
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 1.7
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 28 1.7
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 28 1.7
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 28 1.7
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 28 1.7
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 28 2.2
At5g18420.3 68418.m02170 expressed protein non-consensus GC dono... 28 2.2
At5g18420.2 68418.m02169 expressed protein non-consensus GC dono... 28 2.2
At5g18420.1 68418.m02168 expressed protein non-consensus GC dono... 28 2.2
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 28 2.2
At3g33230.1 68416.m04296 hypothetical protein 28 2.2
At2g14340.1 68415.m01604 hypothetical protein 27 2.9
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 27 3.8
At5g15120.1 68418.m01771 expressed protein 27 3.8
At2g18810.1 68415.m02189 hypothetical protein contains Pfam prof... 27 3.8
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 27 3.8
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 27 3.8
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 27 3.8
At2g31720.1 68415.m03871 expressed protein contains Pfam profile... 27 5.0
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 27 5.0
At4g01510.1 68417.m00194 transmembrane ARV1-like family protein ... 26 6.7
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s... 26 8.8
At5g08250.1 68418.m00969 cytochrome P450 family protein contains... 26 8.8
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 26 8.8
At3g42530.1 68416.m04410 Ulp1 protease family similar to At5g281... 26 8.8
At3g26220.1 68416.m03271 cytochrome P450 family protein identica... 26 8.8
At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing pro... 26 8.8
At1g19485.1 68414.m02427 AT hook motif-containing protein contai... 26 8.8
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 160 bits (388), Expect = 3e-40
Identities = 71/114 (62%), Positives = 92/114 (80%)
Frame = +1
Query: 22 MSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLY 201
M+E L L+GT+C H +T IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFS 114
Score = 56.0 bits (129), Expect = 7e-09
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPK-YPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL 234
GH W++ + +P I+S+S DKT+ VW L + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL-----RNTLAGHSGYLNTVAV 201
Query: 235 SSDGNYALSGSWDKTLRLWDLAAGK 309
S DG+ SG D + LWDLA GK
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGK 226
Score = 44.8 bits (101), Expect = 2e-05
Identities = 25/90 (27%), Positives = 44/90 (48%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 207
+ KLR TL GH+G++ +A +P + S +D +++W L + Y L + H
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII-H 238
Query: 208 SHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
S + S Y L + + ++R+WDL
Sbjct: 239 S------LCFSPNRYWLCAATENSIRIWDL 262
Score = 43.6 bits (98), Expect = 4e-05
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 285
I+S+SRD+T+ +W T E Y + + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEAD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 286 LWDLAAGKTTRRFEDHTKDVLSVAFS 363
+W+L K H+ + +VA S
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVS 202
Score = 40.3 bits (90), Expect = 4e-04
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
+ GH+ ++ + + LS S D L +W L E+ +R GH+ + V
Sbjct: 59 MTGHSHFVQDVVLSSD-GQFALSGSWDGELRLWDLATGEST-----RRFVGHTKDVLSVA 112
Query: 232 LSSDGNYALSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVAFS 363
S+D +S S D+T++LW+ L K T + H + V V FS
Sbjct: 113 FSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFS 158
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 157 bits (380), Expect = 3e-39
Identities = 73/115 (63%), Positives = 91/115 (79%)
Frame = +1
Query: 22 MSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLY 201
M+E L L+GT+ H +T IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 366
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL 115
Score = 57.6 bits (133), Expect = 2e-09
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPK-YPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL 234
GH W++ + +P I+S+S DKT+ VW L+ + + L GH+ ++S V +
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL-----RSTLAGHTGYVSTVAV 202
Query: 235 SSDGNYALSGSWDKTLRLWDLAAGK 309
S DG+ SG D + LWDLA GK
Sbjct: 203 SPDGSLCASGGKDGVVLLWDLAEGK 227
Score = 46.0 bits (104), Expect = 8e-06
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 285
I+S+SRD+T+ +W T E Y + + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 286 LWDLAAGKTTRRFEDHTKDVLSVAFS 363
+W+L+ K HT V +VA S
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVS 203
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 216
KLR TL GH G+++ +A +P + S +D +++W L + Y L ++
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL-------EANS 236
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDL 297
+ + S Y L + + +++WDL
Sbjct: 237 VIHALCFSPNRYWLCAATEHGIKIWDL 263
Score = 38.7 bits (86), Expect = 0.001
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH+ ++ + + LS S D L +W L G+ +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLAA-----GVSTRRFVGHTKDVLSVA 112
Query: 232 LSSDGNYALSGSWDKTLRLWD 294
S D +S S D+T++LW+
Sbjct: 113 FSLDNRQIVSASRDRTIKLWN 133
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 154 bits (374), Expect = 1e-38
Identities = 71/114 (62%), Positives = 90/114 (78%)
Frame = +1
Query: 22 MSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLY 201
M+E L L+G + H +T IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFS 114
Score = 56.4 bits (130), Expect = 5e-09
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPK-YPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL 234
GH W++ + +P I+S+S DKT+ VW L + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL-----RNSLVGHSGYLNTVAV 201
Query: 235 SSDGNYALSGSWDKTLRLWDLAAGK 309
S DG+ SG D + LWDLA GK
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGK 226
Score = 42.7 bits (96), Expect = 7e-05
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 285
I+S+SRD+T+ +W T E Y + + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 286 LWDLAAGKTTRRFEDHTKDVLSVAFS 363
+W+L K H+ + +VA S
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVS 202
Score = 42.7 bits (96), Expect = 7e-05
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 207
+ KLR +L GH+G++ +A +P + S +D +++W L + Y L + H
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII-H 238
Query: 208 SHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
S + S Y L + + ++R+WDL
Sbjct: 239 S------LCFSPNRYWLCAATENSIRIWDL 262
Score = 42.3 bits (95), Expect = 9e-05
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH+ ++ + + LS S D L +W L ET +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLATGETT-----RRFVGHTKDVLSVA 112
Query: 232 LSSDGNYALSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVAFS 363
S+D +S S D+T++LW+ L K T + H + V V FS
Sbjct: 113 FSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFS 158
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 60.5 bits (140), Expect = 3e-10
Identities = 33/105 (31%), Positives = 51/105 (48%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
TL HN ++ + + ++ S+S DKT+ + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
SSD + +S S DKTL+LWD+ G + HT V F+
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFN 122
Score = 57.2 bits (132), Expect = 3e-09
Identities = 35/102 (34%), Positives = 56/102 (54%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH I+ +A + I+S+S DKTL +W + ET G K L GH+++ V +
Sbjct: 69 GHENGISDVAFSSD-ARFIVSASDDKTLKLWDV---ET--GSLIKTLIGHTNYAFCVNFN 122
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
N +SGS+D+T+R+WD+ GK + H+ V +V F+
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN 164
Score = 39.1 bits (87), Expect = 9e-04
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +1
Query: 31 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 210
T K L H+ +T + N + +I+SSS D +W ++ G K L
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIW-----DSGTGHCVKTLIDDE 197
Query: 211 HF-ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSV 366
+ +S V S +G + L G+ D TLRLW++++ K + + H + +S AFSV
Sbjct: 198 NPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSV 252
Score = 39.1 bits (87), Expect = 9e-04
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH---SHFISDVVLSSDGNYALSGSWDKTL 282
IL + D TL +W ++ + K GH + IS ++G +SGS D +
Sbjct: 213 ILVGTLDNTLRLWNISSAKF-----LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 283 RLWDLAAGKTTRRFEDHTKDVLSVA 357
+W+L + K ++ E HT+ V++VA
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMNVA 292
Score = 36.7 bits (81), Expect = 0.005
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
I+S S D + +W+L + L QK L GH+ + +V N SGS DKT+R+W
Sbjct: 258 IVSGSEDNCVHMWELNSKK----LLQK-LEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 60.1 bits (139), Expect = 4e-10
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 31 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 210
T+ + L GH G+++ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 211 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAF 360
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKF 256
Score = 41.5 bits (93), Expect = 2e-04
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH + ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH----TKDVLSVAFSV 366
DG +GS D T RL+D+ G + ++ H V S+AFSV
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSV 304
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 60.1 bits (139), Expect = 4e-10
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 31 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 210
T+ + L GH G+++ P +++SS D+T I+W +T + GH+
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142
Query: 211 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAF 360
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F
Sbjct: 143 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKF 194
Score = 41.5 bits (93), Expect = 2e-04
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH + ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 195
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH----TKDVLSVAFSV 366
DG +GS D T RL+D+ G + ++ H V S+AFSV
Sbjct: 196 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSV 242
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET--NYGLPQKRLYGHSHFISDVV 231
G NG +T IA + + + + T VW E + GL Q H + IS +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 286
Query: 232 LSSDGNYALSGSWDKTLRLW 291
LS+DG+ +GSWD L++W
Sbjct: 287 LSADGSALCTGSWDSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 60.1 bits (139), Expect = 4e-10
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 31 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 210
T+ + L GH G+++ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 211 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAF 360
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKF 256
Score = 41.5 bits (93), Expect = 2e-04
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH + ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH----TKDVLSVAFSV 366
DG +GS D T RL+D+ G + ++ H V S+AFSV
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSV 304
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET--NYGLPQKRLYGHSHFISDVV 231
G NG +T IA + + + + T VW E + GL Q H + IS +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 348
Query: 232 LSSDGNYALSGSWDKTLRLW 291
LS+DG+ +GSWD L++W
Sbjct: 349 LSADGSALCTGSWDSNLKIW 368
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 58.4 bits (135), Expect = 1e-09
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +1
Query: 103 PDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 282
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + S S+DK++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Query: 283 RLWDLAAGKTTRRFEDHTKDVLSVAFS 363
RLW+ G+ F H V V++S
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWS 411
Score = 44.0 bits (99), Expect = 3e-05
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH G + Q++ + ++LS S+D TL +W++ + LP GH+ + V S
Sbjct: 400 GHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP-----GHADEVFAVDWS 453
Query: 238 SDGNYALSGSWDKTLRLW 291
DG +SG D+ L+LW
Sbjct: 454 PDGEKVVSGGKDRVLKLW 471
Score = 40.3 bits (90), Expect = 4e-04
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
GH+ + V S DG SGS D T+RLWDL + H VL+VA+S
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWS 160
Score = 40.3 bits (90), Expect = 4e-04
Identities = 30/104 (28%), Positives = 48/104 (46%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH + + +P I S+S DK++ +W T + R GH + V
Sbjct: 356 LTGHQQLVNHVYFSPD-GKWIASASFDKSVRLWN---GITGQFVTVFR--GHVGPVYQVS 409
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
S+D LSGS D TL++W++ K + H +V +V +S
Sbjct: 410 WSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWS 453
Score = 35.9 bits (79), Expect = 0.008
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
T GH W+ +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Query: 229 V-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
LSS ++ S D R+WD+ K+ HT V V
Sbjct: 201 SWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCV 247
Score = 32.3 bits (70), Expect = 0.10
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
T+ GH + ++ +P + S S D T+ +W L + P GH +++ V
Sbjct: 104 TIAGHAEAVLCVSFSPD-GKQLASGSGDTTVRLWDLYTET-----PLFTCKGHKNWVLTV 157
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGK 309
S DG + +SGS + W+ G+
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGE 184
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYAL-SGSWDKTLR 285
+I + S+D T+ +W ET G + L GH H+I+ + LS++ Y L +G++D T R
Sbjct: 254 IIYTGSQDCTIKMW-----ETTQGKLIRELKGHGHWINSLALSTE--YVLRTGAFDHTGR 306
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 58.4 bits (135), Expect = 1e-09
Identities = 33/100 (33%), Positives = 54/100 (54%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH + + NP +I S S D+ + +W++ D N+ + L GH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 351
+SDG+ +S S DKT+R WD+ GK ++ +H+ V S
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNS 143
Score = 43.6 bits (98), Expect = 4e-05
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
TL GH IT ++ +P +L++ D L VW + R K GH H
Sbjct: 217 TLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVWDM-RPYAPQNRCVKIFEGHQHNFEKN 274
Query: 229 VL----SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
+L S DG +GS D+ + +WD + +T + HT V F
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVF 322
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/112 (23%), Positives = 47/112 (41%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 207
ET K + H+ ++ + P +I+S S D T +W + + P K
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK----- 180
Query: 208 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+ I+ V S + +G D +++WDL G+ T E H + ++ S
Sbjct: 181 -YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLS 231
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 106 DMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 285
D I + D + VW L + E L GH I+ + LS DG+Y L+ D L
Sbjct: 193 DKIFTGGVDNDVKVWDLRKGEATMTLE-----GHQDTITGMSLSPDGSYLLTNGMDNKLC 247
Query: 286 LWDL 297
+WD+
Sbjct: 248 VWDM 251
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 58.0 bits (134), Expect = 2e-09
Identities = 31/101 (30%), Positives = 51/101 (50%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH+ ++ Q+ NPK + S+S D+T+ +W L + N+ L L G + D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
D Y ++GS D T ++WD + E HT +V +V+F
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSF 237
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 57.2 bits (132), Expect = 3e-09
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
TL GH I+ + + +++ S+S DKT+I+W T NY L R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS 363
SSD +Y S S D TLR+WD + + + HT V V F+
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFN 137
Score = 52.8 bits (121), Expect = 7e-08
Identities = 32/102 (31%), Positives = 54/102 (52%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH+ I+ +A + S+S D TL +W D + K L GH++F+ V +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
N +SGS+D+T+R+W++ GK R + H+ + SV F+
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFN 179
Score = 45.2 bits (102), Expect = 1e-05
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
K L GH+ IS V S+DGN S S DKT+ LW R+E H+ + +A+S
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWS 94
Score = 45.2 bits (102), Expect = 1e-05
Identities = 29/102 (28%), Positives = 48/102 (47%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH ++ + NP ++I+S S D+T+ +W E G + + HS IS V
Sbjct: 124 LRGHTNFVFCVNFNPP-SNLIVSGSFDETIRIW-----EVKTGKCVRMIKAHSMPISSVH 177
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
+ DG+ +S S D + ++WD G + D +S A
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFA 219
Score = 40.3 bits (90), Expect = 4e-04
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSH---FISDVVLSSDGNYALSGSWDKTL 282
IL ++ D TL KL+ T L K GH++ I+ ++G Y +SGS D +
Sbjct: 228 ILVATLDSTL---KLSNYATGKFL--KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCV 282
Query: 283 RLWDLAAGKTTRRFEDHTKDVLSVA 357
LWDL A +R E HT V+SV+
Sbjct: 283 YLWDLQARNILQRLEGHTDAVISVS 307
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 57.2 bits (132), Expect = 3e-09
Identities = 34/102 (33%), Positives = 53/102 (51%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L HNG I + +P + +SS DKT+ +W + + L +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNVD----GFKL-EKVLTGHQRWVWDCV 260
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
S DG + ++ S D T RLW + AGK + ++ H K + A
Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
Score = 41.5 bits (93), Expect = 2e-04
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGL--PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 282
M+++++ T VW+L R + P +L H+ I +LS Y + S DKT+
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 283 RLWDLAAGKTTRRFEDHTKDVLSVAFSV 366
++W++ K + H + V FSV
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFSV 263
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 327
H++ + V D + SGS D T+++WDL A + +E
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYE 117
Score = 25.8 bits (54), Expect = 8.8
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 118 SSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
S S D T+ +W L QK Y ++ VVL + +SG + +R+WDL
Sbjct: 95 SGSEDGTVKIWDLRAPGC-----QKE-YESVAAVNTVVLHPNQTELISGDQNGNIRVWDL 148
Query: 298 AA 303
A
Sbjct: 149 RA 150
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 56.4 bits (130), Expect = 5e-09
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS--DVV 231
GH+ ++ Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-----AHQKGVNCVDYF 194
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
D Y ++GS D T ++WD + E HT +V +V F
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCF 237
Score = 35.5 bits (78), Expect = 0.011
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS 363
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFN 151
Score = 29.1 bits (62), Expect = 0.95
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 55.6 bits (128), Expect = 1e-08
Identities = 36/102 (35%), Positives = 52/102 (50%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GHN + +P + S S D+T +W + R + P + + GH +SDV
Sbjct: 458 GHNYPVWDAQFSP-FGHYFASCSHDRTARIWSMDRIQ-----PLRIMAGH---LSDVDWH 508
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+ NY +GS DKT+RLWD+ G+ R F H VLS+A S
Sbjct: 509 PNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMS 550
Score = 45.6 bits (103), Expect = 1e-05
Identities = 31/98 (31%), Positives = 47/98 (47%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH+G + +P D +LSSS D T+ +W T+ N + GH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWS-TKLNANLVCYK----GHNYPVWDAQ 467
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 345
S G+Y S S D+T R+W + + R H DV
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV 505
Score = 45.6 bits (103), Expect = 1e-05
Identities = 26/99 (26%), Positives = 46/99 (46%)
Frame = +1
Query: 67 GWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDG 246
G ++ + +P + I + S DKT+ +W + E + GH + + +S DG
Sbjct: 500 GHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLAMSPDG 553
Query: 247 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
Y SG D T+ +WDL+ + H V S+++S
Sbjct: 554 RYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYS 592
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/91 (26%), Positives = 42/91 (46%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH + +A +P M S D T+++W L+ L GH+ + + S
Sbjct: 539 GHRSMVLSLAMSPDGRYMA-SGDEDGTIMMWDLSTARCI-----TPLMGHNSCVWSLSYS 592
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFED 330
+G+ SGS D T++LWD+ + + E+
Sbjct: 593 GEGSLLASGSADCTVKLWDVTSSTKLTKAEE 623
Score = 35.1 bits (77), Expect = 0.014
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
L GHS + S G++ LS S D T+RLW ++ H V FS
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFS 469
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 55.2 bits (127), Expect = 1e-08
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS--DVV 231
GH+ ++ Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-----AHQKGVNCVDYF 194
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
D Y ++GS D T ++WD + + HT +V +V F
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCF 237
Score = 35.1 bits (77), Expect = 0.014
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS 363
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFN 151
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 55.2 bits (127), Expect = 1e-08
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS--DVV 231
GH+ ++ Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-----AHQKGVNCVDYF 194
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
D Y ++GS D T ++WD + + HT +V +V F
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCF 237
Score = 35.1 bits (77), Expect = 0.014
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS 363
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFN 151
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 55.2 bits (127), Expect = 1e-08
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS--DVV 231
GH+ ++ Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD-----AHQKGVNCVDYF 194
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
D Y ++GS D T ++WD + + HT +V +V F
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCF 237
Score = 35.1 bits (77), Expect = 0.014
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS 363
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFN 151
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 55.2 bits (127), Expect = 1e-08
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +1
Query: 10 GFIKM--SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 183
G IK+ E K+ GH + + +P + + + S S D L VW D G
Sbjct: 29 GVIKLWDLEESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGC 83
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
Q GH+ IS + S DG + +SG D +++WDL AGK F+ H + S+ F
Sbjct: 84 IQT-YKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 141
Score = 44.4 bits (100), Expect = 2e-05
Identities = 26/105 (24%), Positives = 47/105 (44%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
+LCGH + +A N + ++L+ + + +W L + + GH S V
Sbjct: 2 SLCGHTSPVDSVAFNSEEV-LVLAGASSGVIKLWDLEESKM-----VRAFTGHRSNCSAV 55
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
G + SGS D LR+WD + ++ HT+ + ++ FS
Sbjct: 56 EFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFS 100
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 54.4 bits (125), Expect = 2e-08
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 10 GFIKM--SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 183
G IK+ E K+ GH + + +P + + + S S D L +W + + G
Sbjct: 80 GVIKLWDVEEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GC 134
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
Q GHS IS + + DG + +SG D +++WDL AGK F+ H + S+ F
Sbjct: 135 IQT-YKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF 192
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/105 (20%), Positives = 47/105 (44%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
+LCGH + +A + ++L+ + + +W + + + GH S V
Sbjct: 53 SLCGHTSAVDSVAFDSAEV-LVLAGASSGVIKLWDVEEAKM-----VRAFTGHRSNCSAV 106
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
G + SGS D L++WD+ + ++ H++ + ++ F+
Sbjct: 107 EFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFT 151
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 53.6 bits (123), Expect = 4e-08
Identities = 29/101 (28%), Positives = 53/101 (52%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH GW + +++S +D+ + +W +T G L+GH + + V +
Sbjct: 266 GH-GWDVKSVDWHPTKSLLVSGGKDQLVKLW-----DTRSGRELCSLHGHKNIVLSVKWN 319
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
+GN+ L+ S D+ ++L+D+ K + F HTKDV S+A+
Sbjct: 320 QNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAW 360
Score = 35.5 bits (78), Expect = 0.011
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +1
Query: 31 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 210
T+K + GH +T +A +P + + +S S D ++ W + + +P H
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----AHD 396
Query: 211 HFISDVVLSSDGNYALSGSWDKTLRLW 291
+ + D+ G SGS D T + W
Sbjct: 397 NSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
GH + V + +SG D+ ++LWD +G+ H VLSV ++
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWN 319
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
L H I +V S + NY +SG TL+ W H + + ++F
Sbjct: 161 LQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSF 215
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 52.8 bits (121), Expect = 7e-08
Identities = 33/96 (34%), Positives = 48/96 (50%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L HN I + +P + +SS DKT+ +W L + L +K L GH ++ D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNLD----GFKL-EKVLTGHERWVWDCD 266
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 339
S DG Y ++ S D T RLW + AGK ++ H K
Sbjct: 267 FSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
Score = 37.5 bits (83), Expect = 0.003
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +1
Query: 109 MILSSSRDKTLIVWK--LTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 282
M+++++ T VW+ R P +L H+ I +LS Y + S DKT+
Sbjct: 182 MVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTV 241
Query: 283 RLWDLAAGKTTRRFEDHTKDVLSVAFSV 366
++W+L K + H + V FS+
Sbjct: 242 KIWNLDGFKLEKVLTGHERWVWDCDFSM 269
Score = 30.3 bits (65), Expect = 0.41
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 172 NYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 324
N +P + H+ + V G+ SGS D ++++WDL + R F
Sbjct: 72 NPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREF 122
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
M+ S S D ++ +W L E +R + ++ VVL + +SG + +R+
Sbjct: 98 MMYSGSEDGSVKIWDLRVREC------QREFRSVSPVNTVVLHPNQTELISGDQNGNIRV 151
Query: 289 WDLAA 303
WDL A
Sbjct: 152 WDLRA 156
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 52.0 bits (119), Expect = 1e-07
Identities = 31/109 (28%), Positives = 52/109 (47%)
Frame = +1
Query: 34 LKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSH 213
LK R + H+ I +A + ++ + S D+T +W+L D + L GH
Sbjct: 489 LKTRSVVAAHDKDINSVAV-ARNDSLVCTGSEDRTASIWRLP-DLVHV----VTLKGHKR 542
Query: 214 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
I V S+ ++ S DKT+++W ++ G + FE HT VL +F
Sbjct: 543 RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASF 591
Score = 46.8 bits (106), Expect = 4e-06
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 207
ETLK + GH G + +A + ++ ++ D+ ++VW + + G GH
Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHAS-GGLLATAGADRKVLVW-----DVDGGFCTHYFRGH 143
Query: 208 SHFISDVVLSSDGN--YALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFS 363
+S ++ D N +SGS D T+R+WDL A T ++ E H V S+A S
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALS 201
Score = 44.0 bits (99), Expect = 3e-05
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +1
Query: 46 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL---TRD-ETNYGLPQKRLY-GHS 210
G GHNG I +A K +S S D+TL VW L + D E L + + H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 211 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
I+ V ++ + + +GS D+T +W L + H + + SV FS
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFS 550
Score = 42.3 bits (95), Expect = 9e-05
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 58 GHNGWITQIATNP-KYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL 234
GH G ++ I +P ++++S S D T+ VW L T + H ++ + L
Sbjct: 142 GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKC-LAIMEKHFSAVTSIAL 200
Query: 235 SSDGNYALSGSWDKTLRLWDL 297
S DG S DK + LWDL
Sbjct: 201 SEDGLTLFSAGRDKVVNLWDL 221
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +1
Query: 196 LYGHSHFIS--DVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
L GH + D +SS GN + +GS DKT+RLW+ + H D+L+VAF+
Sbjct: 397 LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFA 455
Score = 35.1 bits (77), Expect = 0.014
Identities = 24/103 (23%), Positives = 46/103 (44%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
TL GH I + + ++++S DKT+ +W ++ G K GH+ +
Sbjct: 536 TLKGHKRRIFSVEFST-VDQCVMTASGDKTVKIWAISD-----GSCLKTFEGHTSSVLRA 589
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
+DG +S D L+LW++ + ++ H V ++A
Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALA 632
Score = 33.1 bits (72), Expect = 0.058
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +1
Query: 31 TLKLRGTLCGHNGWITQIAT--NPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 204
T+ L GH + + T + +I++ S+DKT+ +W T ++ G+ G
Sbjct: 390 TMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-SKSCIGVGT----G 444
Query: 205 HSHFISDVVLSSDG-NYALSGSWDKTLRLWDL 297
H+ I V + ++ +SGS D+TL++W L
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 52.0 bits (119), Expect = 1e-07
Identities = 31/100 (31%), Positives = 48/100 (48%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH + +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 211 GHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLLD 264
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
S G + LSGS D +RLWDL + + HT V ++A
Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALA 304
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 52.0 bits (119), Expect = 1e-07
Identities = 31/100 (31%), Positives = 48/100 (48%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH + +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 211 GHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLLD 264
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
S G + LSGS D +RLWDL + + HT V ++A
Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALA 304
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 52.0 bits (119), Expect = 1e-07
Identities = 27/96 (28%), Positives = 46/96 (47%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 216
+L T GH ++ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 324
+ D+ S+DG+ L+ +DK ++ WD G+ F
Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTF 364
Score = 29.9 bits (64), Expect = 0.54
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH--SHFISDVVL 234
H + I+ +P + + + S D ++++ TR+ +KR GH + + V
Sbjct: 454 HMHSMPSISVHPN-GNWLAAQSLDNQILIYS-TRERFQLN-KKKRFAGHIVAGYACQVNF 510
Query: 235 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 333
S DG + +SG + WD + K R + H
Sbjct: 511 SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 543
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/75 (17%), Positives = 34/75 (45%)
Frame = +1
Query: 70 WITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGN 249
++ ++ + +++L+ DK ++ W + E Q H ++ + +
Sbjct: 371 YVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ-----HLGAVNTITFVDNNR 425
Query: 250 YALSGSWDKTLRLWD 294
++ S DK+LR+W+
Sbjct: 426 RFVTSSDDKSLRVWE 440
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 51.2 bits (117), Expect = 2e-07
Identities = 27/100 (27%), Positives = 46/100 (46%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH GW+ +A +P + + S D+T+ +W + G+ + L GH + + +S
Sbjct: 174 GHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLAVS 227
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
+ Y S DK ++ WDL K R + H V +A
Sbjct: 228 NRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLA 267
Score = 44.8 bits (101), Expect = 2e-05
Identities = 27/96 (28%), Positives = 41/96 (42%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH + +A +P D++L+ RD VW + + L GH + + V
Sbjct: 258 GHLSGVYCLALHPTL-DVLLTGGRDSVCRVWDIRTKMQIFALS-----GHDNTVCSVFTR 311
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 345
++GS D T++ WDL GKT H K V
Sbjct: 312 PTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSV 347
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+ GH ++ V + +GS D+T+++WD+A G H + V +A S
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVS 227
Score = 31.9 bits (69), Expect = 0.13
Identities = 25/105 (23%), Positives = 44/105 (41%)
Frame = +1
Query: 40 LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFI 219
L+ TL GH + +A + ++ M S+ DK + W L +++ + +GH +
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMF-SAGDDKQVKCWDLEQNKVI-----RSYHGHLSGV 263
Query: 220 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
+ L + L+G D R+WD+ H V SV
Sbjct: 264 YCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSV 308
Score = 31.5 bits (68), Expect = 0.18
Identities = 24/100 (24%), Positives = 39/100 (39%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH+ + + T P P +++ S D T+ W L YG L H + +
Sbjct: 298 LSGHDNTVCSVFTRPTDP-QVVTGSHDTTIKFWDL-----RYGKTMSTLTHHKKSVRAMT 351
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 351
L N S S D T + + L G+ K +++
Sbjct: 352 LHPKENAFASASADNT-KKFSLPKGEFCHNMLSQQKTIIN 390
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 51.2 bits (117), Expect = 2e-07
Identities = 31/98 (31%), Positives = 47/98 (47%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 240
H G +T + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
G +S S DK LR+WDL + H +V SV
Sbjct: 159 GGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSV 196
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
LYGH + + +SSDG ++GS DK L++W L G + H V+ V F
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKF 632
Score = 35.9 bits (79), Expect = 0.008
Identities = 26/112 (23%), Positives = 51/112 (45%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 207
++LK +L GH + I + ++I++ S+DK L +W L ++G K ++ H
Sbjct: 570 DSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNLKIWGL-----DFGDCHKSIFAH 623
Query: 208 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+ V + +Y S D+ ++ WD + E H ++ +A S
Sbjct: 624 GDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAIS 675
Score = 29.9 bits (64), Expect = 0.54
Identities = 24/112 (21%), Positives = 45/112 (40%)
Frame = +1
Query: 25 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 204
S+TL + G + +T IA++ ++ D ++ +W +T G +
Sbjct: 52 SKTLTPSSSRGGPSLAVTSIASSAS--SLVAVGYADGSIRIW-----DTEKGTCEVNFNS 104
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
H ++ + + G+ SGS D + LWD+ R H V + F
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVF 156
Score = 29.9 bits (64), Expect = 0.54
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 294
L GH I + +S+ G++ ++GS D+++R WD
Sbjct: 662 LEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/111 (26%), Positives = 51/111 (45%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 207
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 208 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDF 193
Score = 39.9 bits (89), Expect = 5e-04
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
Score = 33.1 bits (72), Expect = 0.058
Identities = 23/105 (21%), Positives = 44/105 (41%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
+L GH+ I + + ++ + + T+ +W L + + L GH V
Sbjct: 54 SLYGHSSGIDSVTFDASEV-LVAAGAASGTIKLWDLEEAKI-----VRTLTGHRSNCISV 107
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
G + SGS D L++WD+ ++ HT+ V + F+
Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFT 152
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/111 (26%), Positives = 51/111 (45%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 207
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 208 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDF 193
Score = 39.9 bits (89), Expect = 5e-04
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDF 109
Score = 33.1 bits (72), Expect = 0.058
Identities = 23/105 (21%), Positives = 44/105 (41%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
+L GH+ I + + ++ + + T+ +W L + + L GH V
Sbjct: 54 SLYGHSSGIDSVTFDASEV-LVAAGAASGTIKLWDLEEAKI-----VRTLTGHRSNCISV 107
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
G + SGS D L++WD+ ++ HT+ V + F+
Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFT 152
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 50.8 bits (116), Expect = 3e-07
Identities = 29/111 (26%), Positives = 51/111 (45%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 207
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 182 EEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 235
Query: 208 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F
Sbjct: 236 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDF 286
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNF 202
Score = 34.3 bits (75), Expect = 0.025
Identities = 23/105 (21%), Positives = 44/105 (41%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
+L GH+ I + + ++ + + T+ +W L + + L GH V
Sbjct: 147 SLYGHSSGIDSVTFDAS-EGLVAAGAASGTIKLWDLEEAKV-----VRTLTGHRSNCVSV 200
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
G + SGS D L++WD+ ++ HT+ V + F+
Sbjct: 201 NFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFT 245
Score = 26.2 bits (55), Expect = 6.7
Identities = 21/83 (25%), Positives = 31/83 (37%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
T GH + + P I+S D + VW LT + + H I +
Sbjct: 231 TYKGHTRGVNVLRFTPD-GRWIVSGGEDNVVKVWDLTAGKLLH-----EFKSHEGKIQSL 284
Query: 229 VLSSDGNYALSGSWDKTLRLWDL 297
+GS DKT++ WDL
Sbjct: 285 DFHPHEFLLATGSADKTVKFWDL 307
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 50.4 bits (115), Expect = 4e-07
Identities = 28/102 (27%), Positives = 47/102 (46%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH GW+ +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
+S+ Y S DK ++ WDL K R + H V +A
Sbjct: 220 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLA 261
Score = 43.6 bits (98), Expect = 4e-05
Identities = 27/100 (27%), Positives = 45/100 (45%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH + +A +P D++L+ RD VW + + LP H + V+
Sbjct: 252 GHLHGVYCLALHPTL-DVVLTGGRDSVCRVWDIRTKMQIFVLP------HDSDVFSVLAR 304
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
++GS D T++ WDL GK+ +H K V ++A
Sbjct: 305 PTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMA 344
Score = 38.7 bits (86), Expect = 0.001
Identities = 29/105 (27%), Positives = 48/105 (45%)
Frame = +1
Query: 40 LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFI 219
L+ TL GH G + +A + ++ M S+ DK + W L +++ + +GH H +
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMF-SAGDDKQVKCWDLEQNKVI-----RSYHGHLHGV 257
Query: 220 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
+ L + L+G D R+WD+ K H DV SV
Sbjct: 258 YCLALHPTLDVVLTGGRDSVCRVWDIRT-KMQIFVLPHDSDVFSV 301
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
L GH ++ V + +GS D+T+++WD+A G H V +A S
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVS 221
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 50.4 bits (115), Expect = 4e-07
Identities = 33/105 (31%), Positives = 48/105 (45%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
T GH + ++A +P + ++S DKT +W + N G GHS + +
Sbjct: 334 TFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWDI-----NTGAELLLQEGHSRSVYGI 387
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
DG A S D R+WDL G++ F+ H K V SV FS
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFS 432
Score = 34.3 bits (75), Expect = 0.025
Identities = 23/95 (24%), Positives = 47/95 (49%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 240
H ++Q+ P+ + ++S D + +W RD + L K L GH ++ + +++
Sbjct: 464 HANLVSQVKYEPQEGYFLATASYDMKVNIWS-GRD---FSLV-KSLAGHESKVASLDITA 518
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 345
D + + S D+T++LW ++G E T D+
Sbjct: 519 DSSCIATVSHDRTIKLW-TSSGNDDEDEEKETMDI 552
Score = 29.5 bits (63), Expect = 0.72
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
L H +DVV S + + S D+T +LW G + FE H + VAF
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTFEGHLDRLARVAF 347
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
GH + V S +G + SG D R+WDL K+ H V V +
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKY 473
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 49.6 bits (113), Expect = 6e-07
Identities = 34/108 (31%), Positives = 51/108 (47%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 216
KL L GHN + + +P P ++ S S D + + +T G + GH+ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
+ V S DG +GS D+T+RLWDL + +H V SVAF
Sbjct: 246 VLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAF 293
Score = 29.9 bits (64), Expect = 0.54
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 25 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 156
+E L G++ GH W+ + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
Score = 29.5 bits (63), Expect = 0.72
Identities = 23/95 (24%), Positives = 42/95 (44%)
Frame = +1
Query: 76 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 255
T + P ++L+ S D+T+ +W+ DE + + GHS ++ + G A
Sbjct: 21 TWVPATEDRPALLLTGSLDETVKLWR--PDELDL---VRTNTGHSLGVAALAAHPSGIIA 75
Query: 256 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
S S D +R++D+ T E +V + F
Sbjct: 76 ASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQF 110
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 48.0 bits (109), Expect = 2e-06
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +1
Query: 106 DMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 285
+M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T R
Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 286 LWDLAAGKTTRRFEDHTKDVLSVAFS 363
+ L +GK + F HT V F+
Sbjct: 331 IHGLKSGKLLKEFRGHTSYVNHAIFT 356
Score = 39.1 bits (87), Expect = 9e-04
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 112 ILSSSRDKTLIVW-----KLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDK 276
+ SSS D + VW KL +D Y + + H + + S D SGS D
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKD-LQYQADESFMM-HDDPVLCIDFSRDSEMLASGSQDG 285
Query: 277 TLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+++W + G RRF+ H++ V S++FS
Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQGVTSLSFS 314
Score = 34.7 bits (76), Expect = 0.019
Identities = 20/78 (25%), Positives = 42/78 (53%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 240
H+ +T ++ + + +LS+S D+T + L G K GH+ +++ + +S
Sbjct: 304 HSQGVTSLSFS-RDGSQLLSTSFDQTARIHGLKS-----GKLLKEFRGHTSYVNHAIFTS 357
Query: 241 DGNYALSGSWDKTLRLWD 294
DG+ ++ S D T+++WD
Sbjct: 358 DGSRIITASSDCTVKVWD 375
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 47.6 bits (108), Expect = 3e-06
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +1
Query: 46 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISD 225
G + GH ++ +A NP Y I S+S D + +W ++ T P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 226 VVLSSDGNYALSGSWDKTLRLWDL 297
+ S+DGN +S D T+RLW++
Sbjct: 105 LTASTDGNVLVSCGTDCTVRLWNV 128
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 226 VVLSSDGNYALSGSWDKTLRLWDLAAGK 309
V S D Y +SGS D LRLW A +
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASE 355
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 46.4 bits (105), Expect = 6e-06
Identities = 31/109 (28%), Positives = 51/109 (46%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 216
++R TL GH + + + ++S++ D+T+ +W L + G + S+
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK-----GYCTNTVLFTSN- 359
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+ + LS DG SG D LRLWD+ GK H+ V SV+ S
Sbjct: 360 CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLS 408
Score = 39.1 bits (87), Expect = 9e-04
Identities = 21/84 (25%), Positives = 40/84 (47%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+ + +D+ + +W +TN G K LYG I D+ ++ D ++ + L +W
Sbjct: 246 LFTGGQDRAVKMW-----DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
Query: 292 DLAAGKTTRRFEDHTKDVLSVAFS 363
D+++G+ HT V +V S
Sbjct: 301 DVSSGRVRHTLTGHTDKVCAVDVS 324
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 46.0 bits (104), Expect = 8e-06
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH G I ++ + K +LSSS D+T+ +W++ DE R + H++F++ V +
Sbjct: 320 GHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAFN 371
Query: 238 S-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 366
D NY +SGS D +R+WD+ T R D+T D+ + +V
Sbjct: 372 PVDDNYFISGSIDGKVRIWDV----TRCRVVDYT-DIRDIVTAV 410
Score = 35.9 bits (79), Expect = 0.008
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 115 LSSSRDKTLIVWKLTRDETNYGLPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 285
L S D T +V T + + +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLP----PTIFSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 286 LWDLAAGKTTRRFEDHTKDVLSVAFS 363
LW + + R F H V VAF+
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFN 371
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 327
H I + S DG Y S D +R+W + + T +E
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYE 257
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 46.0 bits (104), Expect = 8e-06
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH G I ++ + K +LSSS D+T+ +W++ DE R + H++F++ V +
Sbjct: 320 GHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAFN 371
Query: 238 S-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 366
D NY +SGS D +R+WD+ T R D+T D+ + +V
Sbjct: 372 PVDDNYFISGSIDGKVRIWDV----TRCRVVDYT-DIRDIVTAV 410
Score = 35.9 bits (79), Expect = 0.008
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 115 LSSSRDKTLIVWKLTRDETNYGLPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 285
L S D T +V T + + +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLP----PTIFSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 286 LWDLAAGKTTRRFEDHTKDVLSVAFS 363
LW + + R F H V VAF+
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFN 371
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 327
H I + S DG Y S D +R+W + + T +E
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYE 257
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 45.6 bits (103), Expect = 1e-05
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +1
Query: 19 KMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLP-QKR 195
K ++ + +L H + I +P +++ S + L +WKL ETN K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
L H + D+ S D Y +SGS D + +WD+ G + + H V VA+
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/89 (23%), Positives = 40/89 (44%)
Frame = +1
Query: 25 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 204
+++ K+ +L H + + +P ++S S D + I+W + N G + L
Sbjct: 99 NQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIW-----DVNKGSVHQILDA 152
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLW 291
H H++ V Y S S D+T R++
Sbjct: 153 HCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 45.6 bits (103), Expect = 1e-05
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +1
Query: 19 KMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLP-QKR 195
K ++ + +L H + I +P +++ S + L +WKL ETN K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
L H + D+ S D Y +SGS D + +WD+ G + + H V VA+
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/89 (23%), Positives = 40/89 (44%)
Frame = +1
Query: 25 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 204
+++ K+ +L H + + +P ++S S D + I+W + N G + L
Sbjct: 99 NQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIW-----DVNKGSVHQILDA 152
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLW 291
H H++ V Y S S D+T R++
Sbjct: 153 HCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 45.6 bits (103), Expect = 1e-05
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 216
KLR L GH+ + I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 217 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
+ + + Y +SGS D + +W+L G+ + + H V VA
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA 120
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 45.6 bits (103), Expect = 1e-05
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 216
KLR L GH+ + I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 217 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
+ + + Y +SGS D + +W+L G+ + + H V VA
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA 120
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 45.6 bits (103), Expect = 1e-05
Identities = 26/85 (30%), Positives = 46/85 (54%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
TL GH +I + + +YP I+S+S D+T+ +W + T + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW-QSRTCVSV----LTGHNHYVMCA 141
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAA 303
+ +S S D+T+R+WD+ A
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGA 166
Score = 40.3 bits (90), Expect = 4e-04
Identities = 23/79 (29%), Positives = 44/79 (55%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH+ + A +P P +I+S + D+ + +W++ +ET L GH + +S V+
Sbjct: 202 GHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRM--NETK-AWEVDTLRGHMNNVSSVMFH 257
Query: 238 SDGNYALSGSWDKTLRLWD 294
+ + +S S DK++R+WD
Sbjct: 258 AKQDIIVSNSEDKSIRVWD 276
Score = 29.9 bits (64), Expect = 0.54
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 19 KMSETLKLR-GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 162
+M+ET TL GH ++ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/100 (21%), Positives = 39/100 (39%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 240
H G + + + P + +S D + VW + L GH +I V
Sbjct: 50 HEGPVRGVHFHNSQP-LFVSGGDDYKIKVWNYKNHRCLF-----TLLGHLDYIRTVQFHH 103
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
+ + +S S D+T+R+W+ + H V+ +F
Sbjct: 104 EYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASF 143
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH G I ++ + K +LSSS D+T+ +W++ + R++ H F++ V +
Sbjct: 361 GHTGEILDLSWSEK--GFLLSSSVDETVRLWRVGSSDECI-----RVFSHKSFVTCVAFN 413
Query: 238 S-DGNYALSGSWDKTLRLWDLA 300
D NY +SGS D +R+WD++
Sbjct: 414 PVDDNYFISGSIDGKVRIWDVS 435
Score = 37.1 bits (82), Expect = 0.004
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +1
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
PQ GH+ I D+ S G + LS S D+T+RLW + + R H V VAF+
Sbjct: 355 PQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFN 413
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 45.2 bits (102), Expect = 1e-05
Identities = 30/103 (29%), Positives = 51/103 (49%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 216
++ TL GH+ +T + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 345
+ V + Y +S S D T +DL++G + D +K+V
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
DG +G+ +++WD+ + +F+ HT +V +++FS
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS 404
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 45.2 bits (102), Expect = 1e-05
Identities = 30/103 (29%), Positives = 51/103 (49%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 216
++ TL GH+ +T + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 345
+ V + Y +S S D T +DL++G + D +K+V
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
DG +G+ +++WD+ + +F+ HT +V +++FS
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS 404
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 44.8 bits (101), Expect = 2e-05
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = +1
Query: 70 WITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGN 249
W Q + N KY + SSS+D+T I+W+++ D + L + L GH + ++ S D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISADG-HISL-KHTLVGHHKPVIAILWSPDDR 332
Query: 250 YALSGSWDKTLRLWDLAAGKTTRRFE 327
L+ ++ +R WD+ +G +E
Sbjct: 333 QVLTCGAEEVIRRWDVDSGDCVHMYE 358
Score = 29.9 bits (64), Expect = 0.54
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 13 FIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 162
+I T KL L GH G + ++ +P M+ S+S D T+ +W L R
Sbjct: 514 YIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +1
Query: 100 YPDM--ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWD 273
YPD I++ D+++ +W L E Q+ + +SD+ ++ DG + +S D
Sbjct: 370 YPDGQGIIAGMTDRSICMWDLDGREKECWKGQR-----TQKVSDIAMTDDGKWLVSVCKD 424
Query: 274 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+ L+D A T R + + S + S
Sbjct: 425 SVISLFDREA--TVERLIEEEDMITSFSLS 452
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSVAFS 363
L H+ + + S +G Y S S D+T +W+++A H K V+++ +S
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWS 328
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 44.4 bits (100), Expect = 2e-05
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = +1
Query: 106 DMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 285
D++ + ++D +++ W+ TN P L GH+ ++ V L N SGS DKT++
Sbjct: 241 DLLFAGTQDGSILAWRYNA-ATNCFEPSASLTGHT--LAVVTLYVGANRLYSGSMDKTIK 297
Query: 286 LWDLAAGKTTRRFEDHTKDVLSV 354
+W L + + DH+ V+S+
Sbjct: 298 VWSLDNLQCIQTLTDHSSVVMSL 320
Score = 39.9 bits (89), Expect = 5e-04
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 193 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 315
+L GH +S + L S + +GS D+TLR+WD A+G+ T
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCT 186
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVW 150
E+ L L GH ++ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Frame = +1
Query: 58 GHNGWITQIA---TNPKYPDMILSSSRDKTLIVWKL----TRDETNYGLPQKRLYGHSHF 216
GH+G I+ +A +N + ++S+D+TL ++K + D T K L GH
Sbjct: 148 GHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKAS 207
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWD 294
+ V GN S SWD T+ LW+
Sbjct: 208 VQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 33.1 bits (72), Expect = 0.058
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 309
L GH+ +S VV + + S SWD ++R WD+ GK
Sbjct: 268 LVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDVETGK 304
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL-SSDGNYALSGSWDKTLR 285
+I + D L VW + T+ P + HS +IS S + LS S+D +
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTS--APVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 286 LWDLAAGKTTR 318
LWDL T+
Sbjct: 385 LWDLRTAVMTK 395
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Frame = +1
Query: 58 GHNGWITQIA---TNPKYPDMILSSSRDKTLIVWKL----TRDETNYGLPQKRLYGHSHF 216
GH+G I+ +A +N + ++S+D+TL ++K + D T K L GH
Sbjct: 148 GHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKAS 207
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWD 294
+ V GN S SWD T+ LW+
Sbjct: 208 VQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 33.1 bits (72), Expect = 0.058
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 309
L GH+ +S VV + + S SWD ++R WD+ GK
Sbjct: 268 LVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDVETGK 304
Score = 30.7 bits (66), Expect = 0.31
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVL-SSDGNYALSGSWDKTLR 285
+I + D L VW + T+ P + HS +IS S + LS S+D +
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTS--APVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 286 LWDLAAGKTTRRFEDHTKDVLS 351
LWDL + H VLS
Sbjct: 385 LWDLRTAWPLSVIDTHNDKVLS 406
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 44.0 bits (99), Expect = 3e-05
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 106 DMILSSSRDKTLIVWKLTRDETNYGLP-QKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 282
+++ S + L +WKL ETN K L H + D+ S D Y +SGS D +
Sbjct: 18 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 77
Query: 283 RLWDLAAGKTTRRFEDHTKDVLSVAF 360
+WD+ G + + H V VA+
Sbjct: 78 IIWDVNKGSVHQILDAHCHYVQGVAW 103
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/89 (23%), Positives = 40/89 (44%)
Frame = +1
Query: 25 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 204
+++ K+ +L H + + +P ++S S D + I+W + N G + L
Sbjct: 40 NQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIW-----DVNKGSVHQILDA 93
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLW 291
H H++ V Y S S D+T R++
Sbjct: 94 HCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 44.0 bits (99), Expect = 3e-05
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
L GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAF 527
Score = 34.7 bits (76), Expect = 0.019
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +1
Query: 139 LIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 318
L+VW R ET Y L Q+ GH ++ V S D +G+ D +++W++ +G
Sbjct: 331 LLVWDW-RTET-YILKQQ---GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFI 385
Query: 319 RFEDHTKDVLSVAF 360
F +HT V ++ F
Sbjct: 386 TFTEHTNAVTALHF 399
Score = 34.7 bits (76), Expect = 0.019
Identities = 22/98 (22%), Positives = 41/98 (41%)
Frame = +1
Query: 13 FIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQK 192
F+ +T +++ L GH + + +P ++ SSS D T+ +W + +
Sbjct: 460 FVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFASKGTV----- 513
Query: 193 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 306
+ H+H + V DG S + D + WD G
Sbjct: 514 ETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 551
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 44.0 bits (99), Expect = 3e-05
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
L GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAF 567
Score = 34.7 bits (76), Expect = 0.019
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = +1
Query: 139 LIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 318
L+VW R ET Y L Q+ GH ++ V S D +G+ D +++W++ +G
Sbjct: 371 LLVWDW-RTET-YILKQQ---GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFI 425
Query: 319 RFEDHTKDVLSVAF 360
F +HT V ++ F
Sbjct: 426 TFTEHTNAVTALHF 439
Score = 34.7 bits (76), Expect = 0.019
Identities = 22/98 (22%), Positives = 41/98 (41%)
Frame = +1
Query: 13 FIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQK 192
F+ +T +++ L GH + + +P ++ SSS D T+ +W + +
Sbjct: 500 FVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFASKGTV----- 553
Query: 193 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 306
+ H+H + V DG S + D + WD G
Sbjct: 554 ETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEG 591
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 44.0 bits (99), Expect = 3e-05
Identities = 29/102 (28%), Positives = 52/102 (50%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 216
++ TL GH+ +T I D++L++S DKT+ +W + D NY + L HS
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 342
+ V + + Y +S S D T +DL++G + D +++
Sbjct: 312 VRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASEN 353
Score = 34.3 bits (75), Expect = 0.025
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-GKTTRR--FEDHTKDVLSV 354
L GHS ++ + D + L+ S DKT+R+W + G T R +DH+ +V +V
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAV 315
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 43.6 bits (98), Expect = 4e-05
Identities = 28/104 (26%), Positives = 48/104 (46%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH G + N + L+ +D+T+ +W R G+ K H + DV
Sbjct: 14 LKGHEGAVLAARFNGD-GNYALTCGKDRTIRLWNPHR-----GILIKTYKSHGREVRDVH 67
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
++SD S D+ + WD++ G+ R+F H +V +V F+
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFN 111
Score = 33.5 bits (73), Expect = 0.044
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 333
++ + +S+DGN L+G D TLRL D G+ + ++ H
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 294
++ GH ++ V + + +S +D++LR+WD
Sbjct: 96 RKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 43.6 bits (98), Expect = 4e-05
Identities = 27/84 (32%), Positives = 43/84 (51%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+++ S D+ + VW + +T Y L R GH I+D+ +SS+ + S S D +R+W
Sbjct: 260 VITGSDDRLVKVWSM---DTAYCLASCR--GHEGDITDLAVSSNNIFIASASNDCVIRVW 314
Query: 292 DLAAGKTTRRFEDHTKDVLSVAFS 363
L G HT V ++AFS
Sbjct: 315 RLPDGLPVSVLRGHTGAVTAIAFS 338
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
KRL GH + + +L G Y ++GS D+ +++W + H D+ +A S
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVS 296
Score = 30.3 bits (65), Expect = 0.41
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 52 LCGHNGWITQIATNPK--YPDMILSSSRDKTLIVW 150
L GH G +T IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 43.2 bits (97), Expect = 5e-05
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 522 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 289 WDLA-AGKTTRRFEDHTKDVLSVAF 360
WD + G R H V+S+ F
Sbjct: 577 WDASDPGYFLRTISGHAAPVMSIDF 601
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWK 153
T+ GH I+ +A +P ++ S+S DK++ +WK
Sbjct: 752 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 785
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +1
Query: 82 IATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALS 261
+ +P YPD+++ + + +W ++ + GH IS + S S
Sbjct: 722 VVFHPSYPDLLVIGGY-QAIELWNTMENKC------MTVAGHECVISALAQSPSTGVVAS 774
Query: 262 GSWDKTLRLW 291
S DK++++W
Sbjct: 775 ASHDKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 5e-05
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 289 WDLA-AGKTTRRFEDHTKDVLSVAF 360
WD + G R H V+S+ F
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDF 603
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWK 153
T+ GH I+ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +1
Query: 82 IATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALS 261
+ +P YPD+++ + + +W ++ + GH IS + S S
Sbjct: 724 VVFHPSYPDLLVIGGY-QAIELWNTMENKC------MTVAGHECVISALAQSPSTGVVAS 776
Query: 262 GSWDKTLRLW 291
S DK++++W
Sbjct: 777 ASHDKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 5e-05
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 289 WDLA-AGKTTRRFEDHTKDVLSVAF 360
WD + G R H V+S+ F
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDF 603
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWK 153
T+ GH I+ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +1
Query: 82 IATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALS 261
+ +P YPD+++ + + +W ++ + GH IS + S S
Sbjct: 724 VVFHPSYPDLLVIGGY-QAIELWNTMENKC------MTVAGHECVISALAQSPSTGVVAS 776
Query: 262 GSWDKTLRLW 291
S DK++++W
Sbjct: 777 ASHDKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 5e-05
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 289 WDLA-AGKTTRRFEDHTKDVLSVAF 360
WD + G R H V+S+ F
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDF 603
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWK 153
T+ GH I+ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +1
Query: 82 IATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALS 261
+ +P YPD+++ + + +W ++ + GH IS + S S
Sbjct: 724 VVFHPSYPDLLVIGGY-QAIELWNTMENKC------MTVAGHECVISALAQSPSTGVVAS 776
Query: 262 GSWDKTLRLW 291
S DK++++W
Sbjct: 777 ASHDKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 5e-05
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 289 WDLA-AGKTTRRFEDHTKDVLSVAF 360
WD + G R H V+S+ F
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDF 603
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWK 153
T+ GH I+ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +1
Query: 82 IATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALS 261
+ +P YPD+++ + + +W ++ + GH IS + S S
Sbjct: 724 VVFHPSYPDLLVIGGY-QAIELWNTMENKC------MTVAGHECVISALAQSPSTGVVAS 776
Query: 262 GSWDKTLRLW 291
S DK++++W
Sbjct: 777 ASHDKSVKIW 786
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 42.7 bits (96), Expect = 7e-05
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLR 285
++LSSS DKT+ +W + ET L +L+ H+ +++ + S D NY LSGS D +R
Sbjct: 519 LLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCIQFSPVDENYFLSGSLDAKIR 572
Query: 286 LWDL 297
+W +
Sbjct: 573 IWSI 576
Score = 33.9 bits (74), Expect = 0.033
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = +1
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
P L GH I D+ S LS S DKT+RLWD+ KT + H V + FS
Sbjct: 498 PVCSLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFS 555
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L HN ++T I +P + LS S D + +W + + + + L+ ++
Sbjct: 542 LFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSI---QDRHVVEWSDLH---EMVTAAC 595
Query: 232 LSSDGNYALSGSWDKTLRLWD 294
+ DG AL GS R +D
Sbjct: 596 YTPDGQGALIGSHKGICRAYD 616
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 42.7 bits (96), Expect = 7e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 318
K+L GHS ++D SS+ Y S S DKT+R+W+L+ G R
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIR 252
Score = 34.3 bits (75), Expect = 0.025
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +1
Query: 52 LCGHNGWITQI--ATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISD 225
L GH+ +T ++N +Y I SSS DKT+ VW+L+R G+ + +YG S
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR-----GVCIRVIYGISPQYCI 263
Query: 226 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR--FED 330
+ N+ +G+ +K L +++ + G+ ++ FED
Sbjct: 264 RFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFED 300
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 42.3 bits (95), Expect = 9e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Frame = +1
Query: 19 KMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQ--K 192
K+ ET + T GH G + + +P ++ S S D T +W + + + L + K
Sbjct: 434 KIGETRPAK-TFTGHQGEVNCVKWDPT-GSLLASCSDDSTAKIWNIKQSTFVHDLREHTK 491
Query: 193 RLYGHSHFISDVVLSSDGNYAL--SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+Y + ++ S S+D T++LWD GK F H + V S+AFS
Sbjct: 492 EIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFS 550
Score = 39.5 bits (88), Expect = 7e-04
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 91 NPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSW 270
NP + S+S D T+ +W + G GH + + S +G Y SGS
Sbjct: 507 NPNKQLTLASASFDSTVKLW-----DAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSL 561
Query: 271 DKTLRLWDLAAGKTTRRF 324
DK++ +W + GK + +
Sbjct: 562 DKSIHIWSIKEGKIVKTY 579
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
H I + + G+Y L+GS D+T +WD+ A + ++FE H+ L V
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDV 413
Score = 32.7 bits (71), Expect = 0.077
Identities = 28/103 (27%), Positives = 48/103 (46%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHF 216
+L TL H G I + N K D +L+ S D+T +VW + +E +++ HS
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEEW-----KQQFEFHSGP 409
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 345
DV ++ ++A S S D + L + + + F H +V
Sbjct: 410 TLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEV 451
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 306
L GH+ + S + SGS D T R+W + G
Sbjct: 261 LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEG 297
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 42.3 bits (95), Expect = 9e-05
Identities = 26/87 (29%), Positives = 46/87 (52%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
TL GH +I + + + P I+S+S D+T+ +W + T + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW-QSRTCISV----LTGHNHYVMCA 141
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGK 309
+ +S S D+T+R+WD+ A K
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALK 168
Score = 39.1 bits (87), Expect = 9e-04
Identities = 22/79 (27%), Positives = 44/79 (55%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH+ + + +P P +I+S + D+ + +W++ +ET L GH + +S V+
Sbjct: 202 GHDRGVNWASFHPTLP-LIVSGADDRQVKLWRM--NETK-AWEVDTLRGHMNNVSSVMFH 257
Query: 238 SDGNYALSGSWDKTLRLWD 294
+ + +S S DK++R+WD
Sbjct: 258 AKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect = 0.044
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GHN ++ + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 232 LSSDG--NYALSG 264
D Y L G
Sbjct: 190 GGVDAIVKYVLEG 202
Score = 29.9 bits (64), Expect = 0.54
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 19 KMSETLKLR-GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 162
+M+ET TL GH ++ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
L GH +I V + + +S S D+T+R+W+ + H V+ +F
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASF 143
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 41.1 bits (92), Expect = 2e-04
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
T GH G + +A +P ++ + D +WK+ + LP GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAG 306
S DG SG D ++++D ++G
Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSG 145
Score = 39.1 bits (87), Expect = 9e-04
Identities = 29/102 (28%), Positives = 51/102 (50%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GHN +T P +I + S D +LIVW E+ + + + Y H+ ++ + ++
Sbjct: 195 GHNLNVTCGDFTPD-GKLICTGSDDASLIVWNPKTCESIH-IVKGHPY-HTEGLTCLDIN 251
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
S+ + A+SGS D ++ + ++ GK HT V V FS
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFS 293
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 40.7 bits (91), Expect = 3e-04
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRD-ETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 285
M+ + + +++VWK T D E++ L GHS ++ + G SGS DKT++
Sbjct: 224 MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIK 281
Query: 286 LWDLAAGKTTRRFEDHTKDVLSV 354
+WDL + + HT V S+
Sbjct: 282 MWDLNTLQCIMTLKQHTGTVTSL 304
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 309
L GH+ + + L + S S D TLR+WD +G+
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQ 164
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 40.7 bits (91), Expect = 3e-04
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
M+ S+ DK ++W T+ P+ L H+ I+D+ S + S+DKT+R+
Sbjct: 665 MLASAGHDKKAVLWY-----TDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 289 WDL-AAGKTTRRFEDHTKDVLSVAF 360
WD G + R F H+ V S+ F
Sbjct: 720 WDADNKGYSLRTFMGHSSMVTSLDF 744
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 235 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
SSDG S DK LW K E+HT + + FS
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFS 702
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 156
T GH+ +T + +P D+I S D + W +
Sbjct: 731 TFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSI 766
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 40.7 bits (91), Expect = 3e-04
Identities = 23/97 (23%), Positives = 50/97 (51%)
Frame = +1
Query: 64 NGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSD 243
NG + Q+ + D++ + ++D +++VW+ + + P L GH+ ++ V L
Sbjct: 220 NGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFD-PAASLLGHT--LAVVSLYVG 276
Query: 244 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
N SG+ D ++++W L + + +HT V+S+
Sbjct: 277 ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSL 313
Score = 35.1 bits (77), Expect = 0.014
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 193 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 315
+L GH ++ + L S + + S D+T+R+WD A+G+ T
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCT 179
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVW 150
++ L L GH +T IA P D + ++S+D+T+ +W
Sbjct: 132 DSFSLLTQLDGHQKVVTGIAL-PSGSDKLYTASKDETVRIW 171
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 40.3 bits (90), Expect = 4e-04
Identities = 28/96 (29%), Positives = 45/96 (46%)
Frame = +1
Query: 16 IKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKR 195
+K L L HN I +A + ++ S D +++VW+ RD+ +
Sbjct: 243 VKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGM 300
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA 303
L GH+ + + + SD SGS DKT+RLW +A
Sbjct: 301 LRGHTESVLCLAVVSD--ILCSGSADKTVRLWKCSA 334
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS 363
H +S + LS DG S SWD+TL++W K F + H + +VA S
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALS 217
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
G+S I V S+DG ++GS D ++ ++DL A + + R HT DV +V F+
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFA 280
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 240
H + + + ++ILS S D VW R P L GH ++ +
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSRG 328
Query: 241 DGNYALSGSWDKTLRLWDL 297
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 40.3 bits (90), Expect = 4e-04
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+++ S D+ + +W + ET L R GH I+D+ +SS+ S S D +R+W
Sbjct: 320 VITGSDDRLVKIWSM---ETALCLASCR--GHEGDITDLAVSSNNALVASASNDFVIRVW 374
Query: 292 DLAAGKTTRRFEDHTKDVLSVAFS 363
L G HT V ++AFS
Sbjct: 375 RLPDGMPISVLRGHTGAVTAIAFS 398
Score = 35.9 bits (79), Expect = 0.008
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
K+L GH + + + G Y ++GS D+ +++W + H D+ +A S
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVS 356
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 40.3 bits (90), Expect = 4e-04
Identities = 33/103 (32%), Positives = 50/103 (48%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH +T + N + D++ S ++D T VW E L R GHS + +S
Sbjct: 35 GHERPLTFLRYN-RNGDLLFSCAKDHTPTVWFADNGER---LGTYR--GHSGAVWCCDIS 88
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 366
D + ++GS D+T +LWD+ +GK F+ SV FSV
Sbjct: 89 RDSSRLITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSV 130
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
I+S D + +W ET L Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 190 IVSGGEDAAIRIWDA---ETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 246
Query: 289 WDL 297
WD+
Sbjct: 247 WDM 249
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 39.9 bits (89), Expect = 5e-04
Identities = 27/99 (27%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH G + I+ + + +LS+S DKT+ +WK+ ++ ++ H+ +++ V +
Sbjct: 326 GHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSNDC------LGVFAHNSYVTSVQFN 377
Query: 238 S-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 351
+ NY +SGS D +R+W++ +G + + D KD++S
Sbjct: 378 PVNENYFMSGSIDGKVRIWNI-SGCSVVDWAD-LKDIIS 414
Score = 38.7 bits (86), Expect = 0.001
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 175 YGLPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 345
+ + +K LY GH+ + D+ S D NY LS S DKT+RLW + + F H V
Sbjct: 314 FRIMEKPLYEFRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYV 371
Query: 346 LSVAFS 363
SV F+
Sbjct: 372 TSVQFN 377
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 39.9 bits (89), Expect = 5e-04
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLR 285
++LSSS DKT+ +W + ET L +L+ H+ +++ V + D +Y +SGS D +R
Sbjct: 532 LLLSSSMDKTVRLWDI---ETQSCL---KLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585
Query: 286 LWDLA 300
+W+++
Sbjct: 586 IWNIS 590
Score = 33.5 bits (73), Expect = 0.044
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +1
Query: 166 ETNYGLPQKRLYGHSHFISDVV-LS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 339
ET + L K + + + DV+ LS S LS S DKT+RLWD+ + F H
Sbjct: 502 ETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFA-HND 560
Query: 340 DVLSVAFS 363
V V F+
Sbjct: 561 YVTCVQFN 568
Score = 30.3 bits (65), Expect = 0.41
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L HN ++T + NP D +S S D + +W ++ + K + ++ V
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVVEWNDLKEM------VTAVC 608
Query: 232 LSSDGNYALSGSWDKTLRLW 291
+ DG A GS + RL+
Sbjct: 609 YTPDGQAAFVGSINGHCRLY 628
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 39.1 bits (87), Expect = 9e-04
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR---DETNYGL-----PQKRLY-- 201
L H G + Q+ +P + ++ SS D+ L+VW + R ++ L P + L+
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 202 -GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLAAGKTTRRFEDHTKD 342
GH ISD + D + +S + D +L++W +A ED D
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDD 409
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +1
Query: 64 NGWITQIATNPKYPDMILSSSRDKTLIVWKLTR----DETNYGLPQKRLYGHSHFISDVV 231
+G + + P+ P ++ + + + ++ R +T+ P RL GH +
Sbjct: 117 DGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLA 176
Query: 232 LSS-DGNYALSGSWDKTLRLWDLAAGKTTR 318
SS Y LSGS D+ + LWD++A T +
Sbjct: 177 WSSFKEGYLLSGSQDQRICLWDVSATATDK 206
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH I +A + K ++ S+ D L++W L ++ Q ++ H I+ + +
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQM-----QHQVKVHEREINYLSFN 270
Query: 238 SDGNYAL-SGSWDKTLRLWDL 297
+ L + S D T+ L+DL
Sbjct: 271 PFNEWVLATASSDSTVALFDL 291
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 39.1 bits (87), Expect = 9e-04
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
I+S DK + +W ET L Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 289 WDL 297
WD+
Sbjct: 220 WDM 222
Score = 37.5 bits (83), Expect = 0.003
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH +T + N + D++ S ++D T +W E L R GH+ + +S
Sbjct: 8 GHERPLTFLRYN-REGDLLFSCAKDHTPTLWFADNGER---LGTYR--GHNGAVWCCDVS 61
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDV 345
D + ++GS D+T +LWD+ +GK T +F T+ V
Sbjct: 62 RDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSV 99
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 39.1 bits (87), Expect = 9e-04
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
I+S DK + +W ET L Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 289 WDL 297
WD+
Sbjct: 220 WDM 222
Score = 37.5 bits (83), Expect = 0.003
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH +T + N + D++ S ++D T +W E L R GH+ + +S
Sbjct: 8 GHERPLTFLRYN-REGDLLFSCAKDHTPTLWFADNGER---LGTYR--GHNGAVWCCDVS 61
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDV 345
D + ++GS D+T +LWD+ +GK T +F T+ V
Sbjct: 62 RDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSV 99
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 39.1 bits (87), Expect = 9e-04
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
I+S DK + +W ET L Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 289 WDL 297
WD+
Sbjct: 220 WDM 222
Score = 37.5 bits (83), Expect = 0.003
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH +T + N + D++ S ++D T +W E L R GH+ + +S
Sbjct: 8 GHERPLTFLRYN-REGDLLFSCAKDHTPTLWFADNGER---LGTYR--GHNGAVWCCDVS 61
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDV 345
D + ++GS D+T +LWD+ +GK T +F T+ V
Sbjct: 62 RDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSV 99
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 39.1 bits (87), Expect = 9e-04
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 6/119 (5%)
Frame = +1
Query: 25 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYG 204
S T+ RG GH + +A +P S D LI+W R TN ++ +
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWD-ARTGTNPVTKVEKAHD 337
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAA---GKTTRRFEDHTKDVLSVAFS 363
D D N L+GS D T+RL+D L A G +FE H VL V +S
Sbjct: 338 ADLHCVD-WNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWS 395
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 240
H G + +A + ++ + S D+ L++W L + P + + HS ++ + +
Sbjct: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSAS--KPVQSVVAHSMEVNCLAFNP 283
Query: 241 DGNYAL-SGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFS 363
+ + +GS DKT++L+DL T F+ H ++V V ++
Sbjct: 284 FNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWN 326
Score = 31.9 bits (69), Expect = 0.13
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL------PQKRLY--- 201
T H + Q+ NPK ++ S + L+VW L+R + + P + L+
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHG 371
Query: 202 GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLA 300
GH+ ISD + ++ +S + D L++W +A
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRL 288
+LSSS DKT+ +W L+ +++ HS +++ + + D NY +SGS D +R+
Sbjct: 482 LLSSSMDKTVRLWDLSSKTC------LKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 289 WDL 297
W +
Sbjct: 536 WSI 538
Score = 38.3 bits (85), Expect = 0.002
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 166 ETNYGLPQKRLYGHSHFISDVV-LS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 339
E +GL +K + + DV+ LS S + LS S DKT+RLWDL++ KT + H+
Sbjct: 451 EAVFGLSEKPVCSFVGHLDDVLDLSWSKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHSD 509
Query: 340 DVLSVAFS 363
V + F+
Sbjct: 510 YVTCIQFN 517
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/94 (23%), Positives = 42/94 (44%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 240
H+ ++T I NP + +S S D + +W + + + L+ ++ +
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPDHQV---VDWNDLH---EMVTAACYTP 560
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 342
DG AL GS+ T L++ K +R E + K+
Sbjct: 561 DGQGALVGSYKGTCCLYNTHDNKLQQRREINLKN 594
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 38.7 bits (86), Expect = 0.001
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 309
GH+ I+D+ S DG + +S S D +LR+WD+ K
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
Score = 26.6 bits (56), Expect(2) = 0.030
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 271 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
D +RL+D+ K R F HT + + FS
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFS 566
Score = 26.2 bits (55), Expect(2) = 0.030
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +1
Query: 175 YGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 294
+ + +KR Y H + V S +S + L++WD
Sbjct: 463 FDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWD 502
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
+L GH +T I + + ++ S+ D + VW + ++ + H+ + DV
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK---KVRAFLHHNAPVKDV 211
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED 330
S G LS +D T RL+D+ G T+ F++
Sbjct: 212 KWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKE 245
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 247 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
N LSG +LRLWD+ A K + +L V F
Sbjct: 260 NVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEF 297
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
H +S + L+ D SGSWDKTL++W L+ K E H V +V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV 293
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
++ S S DKTL VW+L+ + + + H ++ VV D + +GS D TL++
Sbjct: 259 LLYSGSWDKTLKVWRLSDSKC-----LESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKV 312
Query: 289 W 291
W
Sbjct: 313 W 313
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +1
Query: 73 ITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNY 252
+T +A N ++ S D T+ W+ + T+ G H H ++ + L++ G+
Sbjct: 337 VTALAVNLT-DAVVYCGSSDGTVNFWERQKYLTHKGTI------HGHRMAVLCLATAGSL 389
Query: 253 ALSGSWDKTLRLW 291
LSG DK + +W
Sbjct: 390 LLSGGADKNICVW 402
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/60 (38%), Positives = 30/60 (50%)
Frame = +1
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
P + LYGH+ + D+ S D N LS S DKT+RLW + F H V V F+
Sbjct: 264 PFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFN 321
Score = 36.7 bits (81), Expect = 0.005
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH G + +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319
Query: 232 LS--SDGNYALSGSWDKTLRLWDLA 300
+ + N+A SGS D R+W L+
Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLS 343
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+++ GH I + S DG Y +G D +++W
Sbjct: 192 QKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 36.7 bits (81), Expect(2) = 0.002
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 199 YGHSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTRRFEDHTKDVLS 351
+ H IS + LS D SGSWDKT ++W DL ++ ED V+S
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVS 261
Score = 28.7 bits (61), Expect = 1.3
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
TL + +T IA + ++ S D T+ W+ + N G+ L GH ++ +
Sbjct: 295 TLLKQDCAVTAIAVDQS-ATLVYCGSSDGTVNFWERENNMKNGGV----LKGHK--LAVL 347
Query: 229 VLSSDGNYALSGSWDKTLRLW 291
L + GN SGS D +R+W
Sbjct: 348 CLVAAGNLMFSGSADLGIRVW 368
Score = 20.6 bits (41), Expect(2) = 0.002
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 106 DMILSSSRDKTLIVWKLTRDETN 174
D I + +D + VWK E+N
Sbjct: 147 DKIFTGHQDGKIRVWKAASKESN 169
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 37.9 bits (84), Expect = 0.002
Identities = 25/96 (26%), Positives = 41/96 (42%)
Frame = +1
Query: 67 GWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDG 246
G + Q+ M+ + + +++VWK T E++ L GH H G
Sbjct: 264 GVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGH-HSGEVTCFVVGG 322
Query: 247 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
SGS DKT+++WDL + + H V S+
Sbjct: 323 EVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSL 358
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 318
L GH + I + L + S S D TL +WD +G+ R
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVR 223
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAF 360
GH+ + + S GN SG D + +WD LA+ K TR RFE+HT V ++A+
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAW 308
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 37.9 bits (84), Expect = 0.002
Identities = 29/111 (26%), Positives = 44/111 (39%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 207
E K TL GH + + +P M+ S S D T+ +W + G+ L GH
Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRGH 159
Query: 208 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
+ V G++ S S DKT+ +W + R + H L F
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTF 210
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 37.9 bits (84), Expect = 0.002
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH ++ +P M+++ S D T+ VW R T+ + + H + DVV
Sbjct: 174 LLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWD-ARVHTSNWIAE---INHGLPVEDVV 229
Query: 232 -LSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSV 354
L S G A +G ++++WDL GK E H K V S+
Sbjct: 230 YLPSGGLIATAGG--NSVKVWDLIGGGKMVCSMESHNKTVTSL 270
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/68 (35%), Positives = 29/68 (42%)
Frame = +1
Query: 163 DETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 342
D N P GH +S V S+ A S S D TLRLWD+ R F HT +
Sbjct: 534 DLRNISQPLHVFSGHKKAVSYVKFLSNNELA-SASTDSTLRLWDVKDNLPVRTFRGHTNE 592
Query: 343 VLSVAFSV 366
V +V
Sbjct: 593 KNFVGLTV 600
Score = 29.1 bits (62), Expect = 0.95
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 247 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
N+ S ++ + +WD+ ++ +E+H K SV FS
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFS 472
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/78 (24%), Positives = 38/78 (48%)
Frame = +1
Query: 73 ITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNY 252
I+ ++ +PK D+++++S D + W++TR + + K H + DG
Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 253 ALSGSWDKTLRLWDLAAG 306
+G DK ++W L +G
Sbjct: 88 VFTGGCDKQAKMWPLLSG 105
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 247 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
N SGS DK +++WD+A GK E H K V +VA++
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWN 266
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/78 (23%), Positives = 37/78 (47%)
Frame = +1
Query: 73 ITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNY 252
I+ ++ +P+ D+++++S D + W+++R + K H + DG
Sbjct: 28 ISSLSFSPR-ADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 253 ALSGSWDKTLRLWDLAAG 306
SG DK ++W L +G
Sbjct: 87 VFSGGCDKQAKMWPLLSG 104
Score = 29.5 bits (63), Expect = 0.72
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 247 NYALSGSWDKTLRLWD 294
N +GSWDKTL+ WD
Sbjct: 127 NLLATGSWDKTLKYWD 142
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 37.1 bits (82), Expect = 0.004
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = +1
Query: 10 GFIKMSETLKLRG--TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 183
G +++ + L+ + T+ GH + +A + ++ S SRDK+++ + E +
Sbjct: 231 GTVQIWDVLRCKNIRTMEGHRLRVGALAWSSS---VLSSGSRDKSILQRDIRTQEDHVS- 286
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+L GH I + SSD SG D L +W+ + + RF +H V ++A+S
Sbjct: 287 ---KLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWS 343
Score = 33.1 bits (72), Expect = 0.058
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
L GHS+ + + +S DG ++G+ D+TLR W++
Sbjct: 418 LTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 244 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
G + G+ T+++WD+ K R E H V ++A+S
Sbjct: 221 GTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS 260
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 37.1 bits (82), Expect = 0.004
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 318
GHS ++ VV S + L+GS D T R+WD GK +
Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVK 237
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 37.1 bits (82), Expect = 0.004
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR---DETNYGL-----PQKRLY-- 201
+ H G + Q+ +P + ++ SS D+ L+VW L R ++ L P + L+
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 202 -GHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDV 345
GH ISD + + + + S + D +L++W +A ++ R E+ +D+
Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA--ESIYRDEEDAEDI 407
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 160 RDETNYGLPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAA 303
+ +T+ P RL GH + S Y LSGS D+ + LWD++A
Sbjct: 152 KSQTSECDPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSA 200
Score = 25.8 bits (54), Expect = 8.8
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH I ++ + K ++ S+ D L++W +T Q ++ H ++ + +
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIW-----DTRTNQMQHQVKVHEREVNYLSFN 269
Query: 238 SDGNYAL-SGSWDKTLRLWDL 297
+ L + S D T+ L+DL
Sbjct: 270 PFNEWVLATASSDSTVALFDL 290
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 37.1 bits (82), Expect = 0.004
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS- 237
H + + NP D L+SS D T+ +W + R + + H++ + V +
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS-----VRTFKEHAYCVYQAVWNP 159
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 351
G+ S S D TLR+WD+ +T H ++LS
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILS 197
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 240
H + Q NPK+ D+ S+S D TL +W + + +P +S
Sbjct: 148 HAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDF----EILSCDWNKY 203
Query: 241 DGNYALSGSWDKTLRLWDL 297
D + S DKT+++WD+
Sbjct: 204 DDCILATSSVDKTVKVWDV 222
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 36.7 bits (81), Expect = 0.005
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E + G FI+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIA-- 421
Query: 229 VLSSDGNYALS-GSWDKTLRLWD 294
S D + L+ G L+LWD
Sbjct: 422 -FSPDNPFLLAMGGVMGELKLWD 443
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 247 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
N S S DK +++WD+A G E HTK+V +VA++
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 285
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 184 PQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLA 300
P + GH + V + S N +GS D+T++LWDL+
Sbjct: 361 PSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLS 400
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
H +S + L+ + SGSWDKTL++W L+ K + H + +VA
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVA 298
Score = 32.3 bits (70), Expect = 0.10
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
++ S S DKTL VW+L+ + + + H I+ V D + +GS D TL++
Sbjct: 263 LLYSGSWDKTLKVWRLSDSKC-----LESIQAHDDAINTVAAGFD-DLLFTGSADGTLKV 316
Query: 289 WDL-AAGKTTRRF 324
W GK T+ F
Sbjct: 317 WKRELQGKGTKHF 329
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRL 288
+LSSS DKT+ +W L+ +++ HS +++ + + D Y +SGS D +R+
Sbjct: 527 LLSSSMDKTVRLWNLSSQTC------LKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRV 580
Query: 289 WDL 297
W +
Sbjct: 581 WSI 583
Score = 34.3 bits (75), Expect = 0.025
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 133 KTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV--LSSDGNYALSGSWDKTLRLWDLAAG 306
K+L + + ++ +GL +K + DV+ S + LS S DKT+RLW+L++
Sbjct: 485 KSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSS- 543
Query: 307 KTTRRFEDHTKDVLSVAFS 363
+T + H+ V + F+
Sbjct: 544 QTCLKVFSHSDYVTCIQFN 562
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 247 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
N S S DK +++WD+A G E HTK+V +VA++
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 317
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 238 SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSV 366
S N +GS DK+++LWDL+ + + + + V S++F+V
Sbjct: 415 STPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAV 459
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = +1
Query: 73 ITQIATNPKYPDMILSSSRDKTLIVWKLTRDE 168
++ I+ N P+++ + S DK++ +W L+ +E
Sbjct: 407 VSSISYNISTPNLLATGSMDKSVKLWDLSNNE 438
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 156
E K G L GH G + + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
H + I D+ + L+ S D+T+++WD+ K T HT V S+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSM 176
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 288
+L++S D+T+ VW + ++ G+ L GH+ + + ++ + +SGS D L
Sbjct: 143 LLTASGDQTIKVWDVEENKCT-GV----LIGHTGTVKSMCSHPTNSDLLVSGSRDGCFAL 197
Query: 289 WDLAAGKTTRRFE 327
WDL ++ + E
Sbjct: 198 WDLRCKSSSHKEE 210
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 214 FISDVVLSSDGNYALSGSWDKTLRLWDL 297
F ++S DG Y LSGS D +W +
Sbjct: 340 FFVRTMISPDGEYVLSGSSDGNAYIWQV 367
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +1
Query: 163 DETNYGLP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 294
+E Y +P + +L GH+ +S + + S G LSGS+D T+R++D
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
Score = 33.9 bits (74), Expect = 0.033
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
H+ I+ V SSDG LS S+D +L++WDL
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDL 402
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 247 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
NY S +D ++LWD+ G+ F +H K SV FS
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFS 805
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 35.9 bits (79), Expect = 0.008
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
++ S D ++ VW + + K H ++ LS G LSGS DKT+R+
Sbjct: 865 LLFSGFSDGSIRVWNVNKKIATLLWDIKE---HKSTVTCFSLSETGECVLSGSADKTIRV 921
Query: 289 WDLAAGKTTRRFEDHTKD 342
W + GK TKD
Sbjct: 922 WQIVKGKLECAEVIKTKD 939
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 35.9 bits (79), Expect = 0.008
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQ---KRLYGHSHFIS 222
L GH + + +P D++ S S D T+ VW D+ Y Q + GHS +
Sbjct: 159 LTGHTQDVKMVQWHPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 223 DVVLSSDGNYALSGSWDKTLRLW 291
+ ++ G+ ++ S D TL++W
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIW 240
Score = 29.1 bits (62), Expect = 0.95
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQK---RLYGHSHFISDVV 231
H + A +P ++ ++S D T +WK NYG + L GH + + V
Sbjct: 73 HTRTVRSCAWSPS-GQLLATASFDGTTGIWK------NYGSEFECISTLEGHENEVKSVS 125
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSV 354
++ G+ + S DK++ +W++ G HT+DV V
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMV 169
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 35.5 bits (78), Expect = 0.011
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH + +A N + S S D+T +W + + L GH+ + +
Sbjct: 18 GHKKKVHSVAWNSN-GTKLASGSVDQTARIWNI-EPHGHSKAKDLELKGHTDSVDQLCWD 75
Query: 238 -SDGNYALSGSWDKTLRLWDLAAGKTTRRFE 327
+ + S DK++RLWD +GK T++ E
Sbjct: 76 PKHSDLVATASGDKSVRLWDARSGKCTQQVE 106
Score = 34.7 bits (76), Expect = 0.019
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH + Q+ +PK+ D++ ++S DK++ +W + Q L G + ++
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCT---QQVELSGEN---INIT 115
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRR 321
DG + G+ D L + D+ K R
Sbjct: 116 YKPDGTHVAVGNRDDELTILDVRKFKPLHR 145
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 181 LPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
L + GH + V +S+G SGS D+T R+W++
Sbjct: 11 LHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNI 49
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +1
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
P L H+ + + G Y GS D + LWD++ R F V +++F+
Sbjct: 183 PLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFN 242
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 35.5 bits (78), Expect = 0.011
Identities = 19/80 (23%), Positives = 39/80 (48%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L GH + ++ N ++ + RDK++ +W++ +E + L GHS + V+
Sbjct: 88 LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVL 146
Query: 232 LSSDGNYALSGSWDKTLRLW 291
+ S S+D T+++W
Sbjct: 147 WHPTMDVLFSCSYDNTIKIW 166
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWK---LTRDET 171
GH + +A NP +I S S DKT+ +W+ LTR T
Sbjct: 18 GHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWT 58
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 181 LPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
L + R HS + +SSDG Y +G D+ + +WD+ + + F H V + F
Sbjct: 213 LREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCF 272
Score = 32.7 bits (71), Expect = 0.077
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 318
H + V LS D + S S D T+ WD+++GKT +
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDK 197
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/75 (20%), Positives = 34/75 (45%)
Frame = +1
Query: 130 DKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 309
D+ + +W + E P GH + +S + + SGS+D+T+++W++
Sbjct: 243 DRHVHIWDVRTREHVQAFP-----GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKA 297
Query: 310 TTRRFEDHTKDVLSV 354
H ++L++
Sbjct: 298 FITENHGHQGEILAI 312
Score = 27.1 bits (57), Expect = 3.8
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETN-YGLPQKRLYGHSHFISDVVL 234
GH G I I K + L+ RD+T++ K+ Y P L FISD
Sbjct: 304 GHQGEILAIDALRK--ERALTVGRDRTMLYHKVPESTRMIYRAPASSLESCC-FISD--- 357
Query: 235 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 345
N LSGS + T+ LW + K F++ +D+
Sbjct: 358 ----NEYLSGSDNGTVALWGMLKKKPVFVFKNAHQDI 390
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 35.5 bits (78), Expect = 0.011
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQ-KRLYGHS---HFIS--DVVLSSDGNYA--LSG 264
+++S S+D ++ VW L R ++ Q LY H+ H +S D+V+ G A +S
Sbjct: 134 LLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISS 193
Query: 265 SWDKTLRLWDLAAGK 309
S D+T ++W L+ GK
Sbjct: 194 SEDRTCKVWSLSRGK 208
Score = 34.3 bits (75), Expect = 0.025
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
I + +++G Y + G + LW++A GK +++ H + V + FS
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFS 129
Score = 33.1 bits (72), Expect = 0.058
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
K+ +GH ++ +V S D + +SGS D ++R+W L
Sbjct: 114 KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 35.5 bits (78), Expect = 0.011
Identities = 20/87 (22%), Positives = 42/87 (48%)
Frame = +1
Query: 34 LKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSH 213
L+ + ++ H+ + IA + + + S D+ + VW E + L L H
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281
Query: 214 FISDVVLSSDGNYALSGSWDKTLRLWD 294
++ + L+ DG+ SGS D+++ +W+
Sbjct: 282 AVNALALNDDGSVLFSGSCDRSILVWE 308
Score = 33.1 bits (72), Expect = 0.058
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = +1
Query: 7 WGFIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLP 186
W S + +RG L GH+ I + D++LS S D+T+ +W+ D + L
Sbjct: 307 WEREDTSNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPDSSYSCL- 362
Query: 187 QKRLYGHSHFISDVVL-----SSDGNYALSGSWDKTLRLWDLAAGKTTRRF 324
+ L GH+ + + D +SGS D ++ W ++ K F
Sbjct: 363 -EVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVTKPDNSF 412
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 187 QKRLY-GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+KRL+ H+ ++ + +S DG + S SWDKTL++W + + + H V ++A S
Sbjct: 187 KKRLWIEHADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVS 244
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.7 bits (76), Expect = 0.019
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 193 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 315
R H ++ + ++DG Y LS D +RLWD+ +G+ T
Sbjct: 307 RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNT 347
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 193 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 318
RL+GH I+ + L D SGSWD ++R+WD ++ K +
Sbjct: 252 RLWGHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVK 291
Score = 32.7 bits (71), Expect = 0.077
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 115 LSSSRD-KTLIVWKLTRDETNYGLPQ-KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
LS R K L V + R T G LYGH+ + V L + + +D +R+
Sbjct: 129 LSDERSWKDLFVEREFRSRTFLGRYSIDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRM 188
Query: 289 WDLAAG 306
WD+ G
Sbjct: 189 WDMEEG 194
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 34.3 bits (75), Expect = 0.025
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Frame = +1
Query: 43 RGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS 222
RG GH + +A P S D L++W R T+ + ++ +
Sbjct: 274 RGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWD-ARTGTSPAMKVEKAHDADLHCV 332
Query: 223 DVVLSSDGNYALSGSWDKTLRLWDL------AAGKTTRRFEDHTKDVLSVAFS 363
D D N L+GS D T+R++D G +FE H VL V +S
Sbjct: 333 D-WNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWS 384
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNY---GLPQKR----LYGHSHFI 219
H G + +I P+ ++ + + +++W Y G P R L GH
Sbjct: 152 HPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDA 211
Query: 220 S-DVVLSSDGNYALSGSWDKTLRLWDL 297
+ + + LSG DK++ LW++
Sbjct: 212 EFALAMCPTEPFVLSGGKDKSVILWNI 238
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 34.3 bits (75), Expect = 0.025
Identities = 21/85 (24%), Positives = 41/85 (48%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
++ S SRDK+++ + E + +L GH + + S D SG D L +
Sbjct: 306 VLSSGSRDKSILQRDIRCQEDHVS----KLAGHKSEVCGLKWSYDNRELASGGNDNRLFV 361
Query: 289 WDLAAGKTTRRFEDHTKDVLSVAFS 363
W+ + + ++ +HT V ++A+S
Sbjct: 362 WNQHSTQPVLKYSEHTAAVKAIAWS 386
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
L GH++ + + +S DG ++G+ D+TLR W++
Sbjct: 461 LTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 34.3 bits (75), Expect = 0.025
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 25 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG-LPQKRLY 201
SET+ +L GH + +I T P P +++++S+D+++ +W + ET L
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV---ETGICILIFAGAG 171
Query: 202 GHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDL 297
GH + + V Y S D T+++W +
Sbjct: 172 GHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSM 204
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 34.3 bits (75), Expect = 0.025
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 250 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+ S +D R+WDL + F+ H K VLSV FS
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFS 181
Score = 29.1 bits (62), Expect = 0.95
Identities = 25/81 (30%), Positives = 31/81 (38%)
Frame = +1
Query: 118 SSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
SS D VW L R N + Q GH + V S +G + SG D R+WDL
Sbjct: 147 SSGFDSLARVWDL-RTARNILIFQ----GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Query: 298 AAGKTTRRFEDHTKDVLSVAF 360
K H V V +
Sbjct: 202 RMRKLLYIIPAHVNLVSQVKY 222
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 34.3 bits (75), Expect = 0.025
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Frame = +1
Query: 46 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISD 225
G L GH I +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 226 VVLS---SDGN-----YALSGSWDKTLRLWDL 297
+ +S SD N SGS D +L++W+L
Sbjct: 379 LAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
Score = 33.5 bits (73), Expect = 0.044
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 351
H +S + LS DG+ S SWD++ ++W + K E D ++
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAIN 239
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+ + S DK + VW + + + L L H ++ + +S DG SG+ D+++ +W
Sbjct: 249 VYTGSADKKIKVWN--KKDKKHSLVAT-LTKHLSAVNALAISEDGKVLYSGACDRSILVW 305
Query: 292 D 294
+
Sbjct: 306 E 306
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 34.3 bits (75), Expect = 0.025
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGN----YALSGSWDKTLRLWDLAAG 306
GHS FI+ S Y +SGS D T+RLWD+ +G
Sbjct: 201 GHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDITSG 239
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 33.9 bits (74), Expect = 0.033
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVW 150
L GH+ + ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 33.9 bits (74), Expect = 0.033
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
P L GH+ +S V G +G+ D L+LW + G+ R +E H + V S
Sbjct: 105 PALTLQGHTKTVSYVRFLDGGTVVTAGT-DGCLKLWSVEDGRVIRTYEGHVNNRNFVGLS 163
Query: 364 V 366
V
Sbjct: 164 V 164
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 33.9 bits (74), Expect = 0.033
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAF 360
K+L H ++ V +++G+ +SGS D+ + LWD G F H +V F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKF 110
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 33.9 bits (74), Expect = 0.033
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Frame = +1
Query: 7 WGFIKMSETLK---LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE--T 171
W +K SE L+G+ G I+ I+ N K ++ S+S + T ++W L + +
Sbjct: 150 WDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPII 209
Query: 172 NYGLPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHT 336
N+ +R L + + + ++++SD + + TL+LWD+ R F H
Sbjct: 210 NFADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQ 263
Query: 337 KDVLSV 354
+ V+++
Sbjct: 264 RGVIAM 269
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 33.9 bits (74), Expect = 0.033
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Frame = +1
Query: 7 WGFIKMSETLK---LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE--T 171
W +K SE L+G+ G I+ I+ N K ++ S+S + T ++W L + +
Sbjct: 150 WDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPII 209
Query: 172 NYGLPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHT 336
N+ +R L + + + ++++SD + + TL+LWD+ R F H
Sbjct: 210 NFADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQ 263
Query: 337 KDVLSV 354
+ V+++
Sbjct: 264 RGVIAM 269
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 33.9 bits (74), Expect = 0.033
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 49 TLCGHNGWITQIA-TNPKYPDMILSSSRDKTLIVWK 153
TL GH G + Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
PQK GHS I DVV+ G + S D T+++
Sbjct: 3 PQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKI 37
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 33.9 bits (74), Expect = 0.033
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+ + S D T+ W L +D G + GH +S +V+ + Y SGSWD T+RLW
Sbjct: 600 VYTGSGDNTIKAWSL-QD----GSLLCTMSGHKSVVSTLVVVNGVLY--SGSWDGTVRLW 652
Query: 292 DLA 300
L+
Sbjct: 653 SLS 655
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 33.5 bits (73), Expect = 0.044
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAF 360
GH+ + + S G SG D + +WD LA+ TR RFE+HT V ++A+
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAW 292
Score = 29.1 bits (62), Expect = 0.95
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 321
L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 368 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 33.5 bits (73), Expect = 0.044
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAF 360
K+L H ++ V ++DG+ LSGS D+ + LWD F+ H ++ F
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKF 106
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 33.5 bits (73), Expect = 0.044
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKT 312
H H ++ V LS D + S S D T+ WD+++GK+
Sbjct: 144 HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKS 179
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 226 VVLSSDGNYALSGSWDKTLRLWDL 297
+ +SSDG Y +G D + LWD+
Sbjct: 212 LAVSSDGRYLATGGVDCHVHLWDI 235
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/51 (25%), Positives = 21/51 (41%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
GH +S + SGS+D TL +W+ H ++LS+
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSI 311
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 33.5 bits (73), Expect = 0.044
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +1
Query: 25 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT-----RDETNYGLPQ 189
S L+L +LC H + + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 190 KRLY 201
+Y
Sbjct: 3370 TVVY 3373
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.5 bits (73), Expect = 0.044
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 49 TLCGHNGWITQIA-TNPKYPDMILSSSRDKTLIVWK 153
TL GH G + ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 33.5 bits (73), Expect = 0.044
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
H+ +S + L+ + S SWD+T+++W +A K H V SV
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV 254
Score = 29.5 bits (63), Expect = 0.72
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
++ S+S D+T+ VW++ + +P H ++ VV +++ SGS D T++
Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIP-----AHDDAVNSVVSTTEA-IVFSGSADGTVKA 273
Query: 289 W 291
W
Sbjct: 274 W 274
Score = 27.1 bits (57), Expect = 3.8
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGN---------YALS 261
++ S S DKT+ VWK RD N L GH+ + + + +D S
Sbjct: 350 LVFSGSADKTICVWK--RD-GNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYS 406
Query: 262 GSWDKTLRLWDLA 300
GS DK++++W ++
Sbjct: 407 GSLDKSVKVWGVS 419
Score = 26.2 bits (55), Expect = 6.7
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +1
Query: 40 LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFI 219
L TL +T +A + + SS D + W+ + + NYG L GH +
Sbjct: 287 LMQTLTKQESAVTALAVSKNGAAVYFGSS-DGLVNFWEREK-QLNYG---GILKGHK--L 339
Query: 220 SDVVLSSDGNYALSGSWDKTLRLW 291
+ + L G+ SGS DKT+ +W
Sbjct: 340 AVLCLEVAGSLVFSGSADKTICVW 363
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 33.5 bits (73), Expect = 0.044
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPD--MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
GH+ + +A +P PD ++S+S+D + L ET + GH +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPM---LRNGETGDWIGT--FEGHKGAVWSCS 63
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
L + A S S D T ++W+ G FE H V + AFS
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFS 106
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.1 bits (72), Expect = 0.058
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 199 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 318
+GH ++ + LS D N+ ++GS D T+ LW + T+R
Sbjct: 2665 FGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSR 2704
Score = 28.7 bits (61), Expect(2) = 0.079
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 25 SETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETN 174
S+ K T GH +T +A +P + +++ SRD T+++W++ + T+
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRIHKAFTS 2703
Score = 22.6 bits (46), Expect(2) = 0.079
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +1
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
P + L GH + +SSD +S S + L + G+ RR D L ++
Sbjct: 2741 PIQVLRGHRRELVCCCVSSDQGVVVSSSESSDVLLHSIRKGRLIRRLVGVKADSLCIS 2798
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 32.7 bits (71), Expect = 0.077
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 309
GH+ ++ + S G + SGS D ++R+W++ G+
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 32.7 bits (71), Expect = 0.077
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
HS +S + L+ D S SWD+T+++W + K + H V SV
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV 183
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 32.3 bits (70), Expect = 0.10
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 184 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVA 357
P L GH H + DV + +GS D LR+WD + H++ VL+VA
Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVA 68
Query: 358 FS 363
S
Sbjct: 69 AS 70
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/83 (18%), Positives = 35/83 (42%)
Frame = +1
Query: 115 LSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 294
+S D ++++ L + + +K + +S + DG A + WD +R+++
Sbjct: 278 ISGGADDKIVMYNLNHSTGSCTI-RKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYN 336
Query: 295 LAAGKTTRRFEDHTKDVLSVAFS 363
G + H +V++S
Sbjct: 337 YRKGNALAILKYHRATCNAVSYS 359
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 32.3 bits (70), Expect = 0.10
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 193 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAF 360
+L GH ++ V +S G+ +SGS D+ + LW+ +G + H ++V F
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKF 106
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 32.3 bits (70), Expect = 0.10
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 247 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
NY S +D +++WD G+ ++ +H K SV FS
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFS 817
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 32.3 bits (70), Expect = 0.10
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVW 150
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 32.3 bits (70), Expect = 0.10
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVW 150
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 32.3 bits (70), Expect = 0.10
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQK--RLYGHSHFISDVV 231
G W+ + + + SS +K + K + + G+ R H ++ +
Sbjct: 261 GDQNWLKTLQSKHTGSQSVKGSSSEKPSVE-KSRQKRIHPGMLSTLDRATAHYGVVTGLK 319
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTT 315
++DG Y LS +RLWD+ +G+ T
Sbjct: 320 ATNDGMYLLSAGSYSRIRLWDIESGRNT 347
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 91 NPKYPDMILSSSRDKTLIVW---KLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALS 261
NP P+++LS D +W KL + + L KR+ ++F S G L+
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYF-----SPSSGTKILT 375
Query: 262 GSWDKTLRLWDLAAG 306
D +R+WD G
Sbjct: 376 TCQDNRIRIWDSIFG 390
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/79 (24%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH+G I I+ + + +LS+S D ++ +W++ ++ ++ H+++++ V +
Sbjct: 354 GHSGDILDISWSKN--NRLLSASVDNSVRLWQIGCEDC------LGIFSHNNYVTSVQFN 405
Query: 238 S-DGNYALSGSWDKTLRLW 291
D ++ +SGS D +R+W
Sbjct: 406 PVDDDHFISGSIDGKVRIW 424
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 162
HN ++T + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 333
+ + H I + S DG Y S D LR+W + + R E+H
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE---RCEEH 289
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/79 (24%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH+G I I+ + + +LS+S D ++ +W++ ++ ++ H+++++ V +
Sbjct: 354 GHSGDILDISWSKN--NRLLSASVDNSVRLWQIGCEDC------LGIFSHNNYVTSVQFN 405
Query: 238 S-DGNYALSGSWDKTLRLW 291
D ++ +SGS D +R+W
Sbjct: 406 PVDDDHFISGSIDGKVRIW 424
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 162
HN ++T + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 333
+ + H I + S DG Y S D LR+W + + R E+H
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDE---RCEEH 289
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 31.9 bits (69), Expect = 0.13
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 223 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 333
+ + DG Y LSGS D TL W++ R+E++
Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENN 285
Score = 30.3 bits (65), Expect = 0.41
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 100 YPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLY-GHSHFISDVVLSSDGNYALSGSWDK 276
+P ++ SSR + R + Y R + GH + + +S + +SGS D+
Sbjct: 77 HPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDR 136
Query: 277 TLRLWDL 297
++RLWDL
Sbjct: 137 SVRLWDL 143
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 187 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAF 360
++ L GH ++ + +S+G+ +SGS D + +W+ ++ K + HT ++ F
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKF 101
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/92 (22%), Positives = 37/92 (40%)
Frame = +1
Query: 79 QIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYAL 258
++ T P + M+ SS K + + R+ H+ +S + L +
Sbjct: 200 RVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTK--------HNDAVSSLSLDVELGLLY 251
Query: 259 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
S SWD T+++W +A K H + SV
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSV 283
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 31.9 bits (69), Expect = 0.13
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 178 GLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 294
G+ L H ++D+ SSD ++ +S S D T+++WD
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
Score = 30.3 bits (65), Expect = 0.41
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 288
M++ S+++ + +W D + L G ++S +V S GN+ +SGS L L
Sbjct: 1203 MVMYSTQNCGIHLWDTRSDLDAWTLKANPEEG---YVSSLVTSPCGNWFVSGSSRGVLTL 1259
Query: 289 WDL 297
WDL
Sbjct: 1260 WDL 1262
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 31.9 bits (69), Expect = 0.13
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPD--MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
GH+ + + +P PD ++S+S+D + L ET + GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
L ++ A S S D + +LWD G FE H V + AFS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFS 111
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHTKDVLSVAF 360
GH+ + + S G SG D + +WD +A+ TR RFE+HT V ++A+
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Score = 29.1 bits (62), Expect = 0.95
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 321
L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 351 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Frame = +1
Query: 112 ILSSSRDKTLIVWK---LTRDETNYG----LPQKRLYGHSHFISDVVLSSDGNYALSGSW 270
I S + +IVW+ L D ++G RL GH I +V S DG+ +S S
Sbjct: 196 IASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSD 255
Query: 271 DKTLRLWDL 297
D++ R+W++
Sbjct: 256 DRSARIWEI 264
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Frame = +1
Query: 112 ILSSSRDKTLIVWK---LTRDETNYG----LPQKRLYGHSHFISDVVLSSDGNYALSGSW 270
I S + +IVW+ L D ++G RL GH I +V S DG+ +S S
Sbjct: 196 IASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSD 255
Query: 271 DKTLRLWDL 297
D++ R+W++
Sbjct: 256 DRSARIWEI 264
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.5 bits (68), Expect = 0.18
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPD--MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
GH+ + + +P PD ++S+S+D + L ET + GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
L ++ A S S D + +LWD G FE H V + AFS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFS 111
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.5 bits (68), Expect = 0.18
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPD--MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
GH+ + + +P PD ++S+S+D + L ET + GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
L ++ A S S D + +LWD G FE H V + AFS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFS 111
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 151 KLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 321
K+ R + N G + L H + V S ++GSWDKT++ WD T R
Sbjct: 79 KVRRIDFNAG-KEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTER 134
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
IS++ S++ ++ L SWDK++RL+D A G R H VL F
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCF 65
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 271 DKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
DKT+++WD A G FE H V SV
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 76 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 255
T +A +P+ ++I D T+ ++ + DE + +L GHS I+ + S+ N
Sbjct: 880 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEV-----KSKLKGHSKRITGLAFSNVLNVL 934
Query: 256 LSGSWDKTLRLWD 294
+S D L +W+
Sbjct: 935 VSSGADAQLCVWN 947
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
D N G D T++++++ + + + H+K + +AFS
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS 928
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 271 DKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
DKT+++WD A G FE H V SV
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 76 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 255
T +A +P+ ++I D T+ ++ + DE + +L GHS I+ + S+ N
Sbjct: 880 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEV-----KSKLKGHSKRITGLAFSNVLNVL 934
Query: 256 LSGSWDKTLRLWD 294
+S D L +W+
Sbjct: 935 VSSGADAQLCVWN 947
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
D N G D T++++++ + + + H+K + +AFS
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS 928
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 256 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+SGS D T+R+WDL +G H V + S
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 190 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 333
KRL+ H S L+ SGSWDKTL++W L+ K + H
Sbjct: 167 KRLW-IEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAH 213
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +1
Query: 106 DMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSD----GNYALSGSWD 273
+M+ S S DK++ +W+ R+ T ++GH + + S + G SG D
Sbjct: 329 EMVCSGSADKSIGLWR--REVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLD 386
Query: 274 KTLRLW 291
K+LR+W
Sbjct: 387 KSLRVW 392
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDV 345
+ ++V S +G Y L+ S D+T+R+++ L A + ED K++
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIYENLLPAKNVLKSLEDLGKNI 263
Score = 27.5 bits (58), Expect = 2.9
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +1
Query: 64 NGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSD 243
+G I +A N + ++ + D ++W ET + R S I+ V S
Sbjct: 23 HGVIKCVAFNHR-GSLLAAGCADGGCVIWDF---ETRGIAKEIRDNDCSAAITSVSWSKY 78
Query: 244 GNYALSGSWDKTLRLWDLAAGKTTRR 321
G+ L + DK+L LWD++ G+ R
Sbjct: 79 GHRLLVSAADKSLTLWDVSTGEKIAR 104
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 154 LTRDETNYGLPQKRLYGHSH--FISDVVLSSDGNYALSGSWDKTLRLWDL 297
+T ETN +R+Y H+H I+ + SSDG +S D + LW+L
Sbjct: 201 VTSQETNLVARCRRVYAHAHDYHINSISNSSDGETFISAD-DLRVNLWNL 249
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDL 297
ISD+ S DG Y LS + TL+LWD+
Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWDI 357
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 154 LTRDETNYGLPQKRLYGHSH--FISDVVLSSDGNYALSGSWDKTLRLWDL 297
+T ETN +R+Y H+H I+ + SSDG +S D + LW+L
Sbjct: 202 VTSQETNLVARCRRVYAHAHDYHINSISNSSDGETFISAD-DLRVNLWNL 250
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDL 297
ISD+ S DG Y LS + TL+LWD+
Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWDI 358
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 30.7 bits (66), Expect = 0.31
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 324
H +++ +V + + + +S S DKTLR+WDL T + F
Sbjct: 453 HDGYVTKLV-APESHLLVSSSLDKTLRIWDLRKSWTPQPF 491
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 171
H+G++T++ + +++SSS DKTL +W L + T
Sbjct: 453 HDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRKSWT 487
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 30.7 bits (66), Expect = 0.31
Identities = 24/105 (22%), Positives = 49/105 (46%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 228
T+ GH +A N + ++ S SRD+ ++ + R ++++ +L GH + +
Sbjct: 252 TMGGHQTRTGVLAWNSR---ILSSGSRDRNILQHDI-RVQSDF---VSKLVGHKSEVCGL 304
Query: 229 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
S D SG D L +W+ + + + +HT V ++ +S
Sbjct: 305 KWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWS 349
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
L GHS + + S DG ++G+ D+TLR W++
Sbjct: 424 LTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 235 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
S DG Y L+G D +++W + K E H V VAF
Sbjct: 354 SMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 271 DKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
DKT+++WD G FE H V SV
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +1
Query: 76 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 255
T +A +P+ ++I D ++ ++ + DE + +L GH ++ + S+ N
Sbjct: 890 TSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEV-----KSKLKGHQKRVTGLAFSNVLNVL 944
Query: 256 LSGSWDKTLRLWDL 297
+S D L +W +
Sbjct: 945 VSSGADSQLCVWSM 958
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 271 DKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
DKT+++WD G FE H V SV
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/74 (21%), Positives = 35/74 (47%)
Frame = +1
Query: 76 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 255
T +A +P+ ++I D ++ ++ + DE + +L GH ++ + S+ N
Sbjct: 890 TSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEV-----KSKLKGHQKRVTGLAFSNVLNVL 944
Query: 256 LSGSWDKTLRLWDL 297
+S D L +W +
Sbjct: 945 VSSGADSQLCVWSM 958
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 40 LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQ 189
LR GH+ +T +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 40 LRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQ 189
LR GH+ +T +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 235 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
S DG Y L+G D +++W + K E H V VAF
Sbjct: 354 SMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 30.7 bits (66), Expect = 0.31
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 321
H +S V +++D +GS+D T+ +WD+ +T +
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEK 1083
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 154 LTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 333
L +D P L GH I+ + +S+D + +SGS D T L G+ R +
Sbjct: 1093 LRKDIVIADAPSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHP 1152
Query: 334 TKDVLS 351
+ +S
Sbjct: 1153 SGSAVS 1158
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 30.3 bits (65), Expect = 0.41
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
IS++ S++ ++ L SWDK +RL+D++ F H VL F
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFL-HGGAVLDCCF 66
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 148 WKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 294
+K+ R N G + L H + V S ++GSWDKT++ WD
Sbjct: 79 YKVRRIVFNVG-KEDILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 30.3 bits (65), Expect = 0.41
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDM--ILSSSRDKTLIVWKLTRDETNYG-LPQKRLYGHSHFI 219
T+ GH+ ++ + K+ D ++SSS D TL +W L+ + P GH++
Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754
Query: 220 SDVVLSSDGNYALSGS 267
+ V LS Y +GS
Sbjct: 755 NFVGLSVSDGYIATGS 770
Score = 29.1 bits (62), Expect = 0.95
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +1
Query: 154 LTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 333
+ D + P L G S S S + S ++D +++WD+A + ++H
Sbjct: 566 IVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEH 625
Query: 334 TKDVLSVAFS 363
K V S+ S
Sbjct: 626 KKRVWSIDIS 635
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 30.3 bits (65), Expect = 0.41
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 271 DKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
DKT+++WD A G FE H V S+
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSI 512
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 76 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 255
T +A +P+ ++I D T+ ++ + DE + +L GHS I+ + S+ N
Sbjct: 869 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEV-----KSKLKGHSKRITGLAFSNVLNVL 923
Query: 256 LSGSWDKTLRLWD 294
+S D L +W+
Sbjct: 924 VSSGADAQLCVWN 936
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
D N G D T++++++ + + + H+K + +AFS
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS 917
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 30.3 bits (65), Expect = 0.41
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 271 DKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
DKT+++WD A G FE H V S+
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSI 512
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 76 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 255
T +A +P+ ++I D T+ ++ + DE + +L GHS I+ + S+ N
Sbjct: 869 TFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEV-----KSKLKGHSKRITGLAFSNVLNVL 923
Query: 256 LSGSWDKTLRLWD 294
+S D L +W+
Sbjct: 924 VSSGADAQLCVWN 936
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
D N G D T++++++ + + + H+K + +AFS
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFS 917
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 30.3 bits (65), Expect = 0.41
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKT 279
++++ + D + VW++++D +K L H+ ++ + +S SGS D T
Sbjct: 3344 IVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCT 3403
Query: 280 LRLWDLAAGKTTRRFED 330
+ +WDL++ R+ D
Sbjct: 3404 VIIWDLSSLSFVRQLPD 3420
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 29.9 bits (64), Expect = 0.54
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD 294
GH + + L S G +SGS D+T+ LWD
Sbjct: 118 GHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 250 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
Y+ WD +LRL L K R F+ H V+S++
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLS 127
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 223 DVVLSSDGNYALSGSWDKTLRLWDLAAGK 309
D S +G + +SGS D + W + +GK
Sbjct: 255 DAAFSPEGMFVVSGSGDGSTHAWGVRSGK 283
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 29.9 bits (64), Expect = 0.54
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD 294
GH + + L S G +SGS D+T+ LWD
Sbjct: 115 GHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 250 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
Y+ WD +LRL L K R F+ H V+S++
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLS 124
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 223 DVVLSSDGNYALSGSWDKTLRLWDLAAGK 309
D S +G + +SGS D + W + +GK
Sbjct: 252 DAAFSPEGMFVVSGSGDGSTHAWGVRSGK 280
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.9 bits (64), Expect = 0.54
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 226 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+ +S DG Y +G L ++DL + T + H ++ S++FS
Sbjct: 391 LAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFS 436
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 29.9 bits (64), Expect = 0.54
Identities = 25/109 (22%), Positives = 50/109 (45%)
Frame = +1
Query: 28 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 207
+T +L L GH+ ++ + + +L+++ D T+ +W + D + +
Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLSG--ERVLTAAHDGTVKMWDVRTDMCVATVGRCS---- 980
Query: 208 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 354
S +S S G A +G D +WD+ +GK + + HTK + S+
Sbjct: 981 SAILSLEYDDSTGILAAAGR-DTVANIWDIRSGKQMHKLKGHTKWIRSI 1028
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 29.5 bits (63), Expect = 0.72
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDVLSVAF 360
GH+ + + S G SG D + +WD +A+ +T R E+HT V ++A+
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 322
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
L GH+ + + S DG S + D+TLR W++
Sbjct: 398 LTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 29.5 bits (63), Expect = 0.72
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDVLSVAF 360
GH+ + + S G SG D + +WD +A+ +T R E+HT V ++A+
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 312
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 196 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
L GH+ + + S DG S + D+TLR W++
Sbjct: 388 LTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
>At4g28620.1 68417.m04092 ABC transporter family protein identical
to half-molecule ABC transporter ATM2 GI:9964119 from
[Arabidopsis thaliana]
Length = 680
Score = 29.5 bits (63), Expect = 0.72
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 119 LHHEI-KLLSCGN*LETKPTTACHRSVCTVTPI 214
LHH KL+ + LE+ PT A H+S +TP+
Sbjct: 28 LHHSFFKLIKRNSILESPPTNASHQSPSPITPM 60
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 29.1 bits (62), Expect = 0.95
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 202 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 294
GH+ +S V S G + +SG DKT+++WD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.1 bits (62), Expect = 0.95
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 202 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 294
GH+ +S V S G + +SG DKT+++WD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 29.1 bits (62), Expect = 0.95
Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +1
Query: 109 MILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS--HFISDVVLSSDGN-YALSGSWDKT 279
++ S+ DK + +W+ + G S +S + S G+ Y SG +
Sbjct: 57 VVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQI 116
Query: 280 LRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+++WDL ++ + HT + V ++
Sbjct: 117 VKIWDLQRKLCIKKLKGHTSTITGVMYN 144
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 29.1 bits (62), Expect = 0.95
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Frame = +1
Query: 103 PDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYAL-----SGS 267
PD++ +SS L +W+++ DE+ L + S + S D N A + S
Sbjct: 98 PDLLATSS--DFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSS 155
Query: 268 WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
D T +WD+ + H K+V +A+
Sbjct: 156 IDTTCTIWDIEREVVDTQLIAHDKEVYDIAW 186
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 29.1 bits (62), Expect = 0.95
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 202 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA 300
GH I V S DG L+ S DK+ ++WD++
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 202 GHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAG 306
GH +S + VL + +Y LSGS+D + W L G
Sbjct: 322 GHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRG 357
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 166 ETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
+ N G + L GH F DG +G+ DKT R+WD+
Sbjct: 305 DPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDI 348
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 205 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 309
HS ++ + SSDG Y SG + L +W L GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 29.1 bits (62), Expect = 0.95
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG-LPQKRLYGHSHFISD 225
T+ GH+ ++ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 226 VVLSSDGNYALSGS 267
V LS Y +GS
Sbjct: 715 VGLSVSDGYIATGS 728
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 259 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
S +++ +++WD+A + ++H K V S+ +S
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYS 585
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 29.1 bits (62), Expect = 0.95
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 49 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG-LPQKRLYGHSHFISD 225
T+ GH+ ++ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 226 VVLSSDGNYALSGS 267
V LS Y +GS
Sbjct: 715 VGLSVSDGYIATGS 728
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +1
Query: 259 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
S +++ +++WD+A + ++H K V S+ +S
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYS 585
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
G G ++ +A +P M+ S +T +++ E Y L +G ++ V S
Sbjct: 210 GQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNMELLYVL-----HGQEGGVTHVQFS 264
Query: 238 SDGNYALSGS-WDKTLRLWDL 297
DGNY +G D + WD+
Sbjct: 265 KDGNYLYTGGRKDPYILCWDI 285
>At3g45370.1 68416.m04898 hypothetical protein
Length = 224
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 318 PGCLSSGKIPKPESFVPGTGKSVISITGQYNVRNEM 211
PG + +P P FVPG GQ N+ NEM
Sbjct: 75 PGDMGPDFVPAPRDFVPGQVIHPGKFFGQTNLSNEM 110
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 127 RDKTLIVWKLTRDETNYGLPQKRLYGHSH 213
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 28.3 bits (60), Expect = 1.7
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 240
H+ ++ I +P I SS K +I T D+ + GH I V S
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASED---GHKGSIYAVSWSP 106
Query: 241 DGNYALSGSWDKTLRLWDLAAGKT 312
D L+ S DK+ ++W++A T
Sbjct: 107 DSKRVLTVSADKSAKVWEVAEDGT 130
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 166 ETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 297
+ N G L GH F DG +G+ DKT R+WD+
Sbjct: 303 DPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDI 346
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 8/43 (18%)
Frame = +1
Query: 52 LCGHNGWITQIA------TNPKYPD--MILSSSRDKTLIVWKL 156
L GH WI + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 157 TRDETNYGLPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 291
+++ N+ + QK GH ++DV + G Y LS S D+T R++
Sbjct: 399 SKESENWQM-QKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVF 442
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 12/52 (23%)
Frame = +1
Query: 34 LKLRGTLCGHNGWITQIATNPKYPDMI------------LSSSRDKTLIVWK 153
+ + L GH W+ + P D I LS+S DKT+++W+
Sbjct: 294 ISVESVLIGHEDWVYSVEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIWR 345
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 37 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRD 165
KL + H I + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 52 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 231
L H G + + N K P+ + S + D T+ +W D N P L G ++ +
Sbjct: 111 LSKHKGPVRGLEFNVKSPNQLASGADDGTVCIW----DLANPSKPSHYLKGTGSYMQSEI 166
Query: 232 LSSDGNYAL-----SGSWDKTLRLWDL 297
S N S S + T +WD+
Sbjct: 167 SSLSWNKGFQHVLASTSHNGTTVIWDV 193
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 58 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLS 237
GH+ + + + P+++ + S D W + RD + H+ + + +
Sbjct: 161 GHDFELWTASFDLNNPNLVYTGSDDCKFSCWDI-RDSPADNRVFQNSKVHTMGVCCISSN 219
Query: 238 SDGNYAL-SGSWDKTLRLWD 294
Y++ +GS+D+TLR+WD
Sbjct: 220 PSDPYSIFTGSYDETLRVWD 239
>At5g18420.3 68418.m02170 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 439
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -3
Query: 140 RVLSRDEDKIMSGYLGLVAI*VIQPLWPQSVPLSFNV---SLIFINP 9
R+ S D D+ +SG+LG + + + P W + P + V L++I+P
Sbjct: 196 RIGSGDRDEALSGFLGNLTMGGLGPRWIRPCPPRYPVHQSELLWIDP 242
>At5g18420.2 68418.m02169 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 442
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -3
Query: 140 RVLSRDEDKIMSGYLGLVAI*VIQPLWPQSVPLSFNV---SLIFINP 9
R+ S D D+ +SG+LG + + + P W + P + V L++I+P
Sbjct: 199 RIGSGDRDEALSGFLGNLTMGGLGPRWIRPCPPRYPVHQSELLWIDP 245
>At5g18420.1 68418.m02168 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 441
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = -3
Query: 140 RVLSRDEDKIMSGYLGLVAI*VIQPLWPQSVPLSFNV---SLIFINP 9
R+ S D D+ +SG+LG + + + P W + P + V L++I+P
Sbjct: 199 RIGSGDRDEALSGFLGNLTMGGLGPRWIRPCPPRYPVHQSELLWIDP 245
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 94 PKYPDMILSSSRDKTLIVWK-LTRDETNYGLPQ 189
P D++L S KT+++WK LT + LPQ
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252
>At3g33230.1 68416.m04296 hypothetical protein
Length = 154
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 318 PGCLSSGKIPKPESFVPGTGKSVISITGQYNVRNEM 211
PG + +P P FVPG GQ N+ NEM
Sbjct: 6 PGDMGPDFVPAPRDFVPGEVIWPGKFFGQTNLSNEM 41
>At2g14340.1 68415.m01604 hypothetical protein
Length = 220
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 318 PGCLSSGKIPKPESFVPGTGKSVISITGQYNVRNEM 211
PG + S +P P F+PG GQ N+ +EM
Sbjct: 72 PGDMGSDFVPAPRDFIPGEVIWPGKFFGQTNLSDEM 107
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +1
Query: 76 TQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGNYA 255
T +A +P+ ++I D T+ ++ + DE + +L GH I+ + S+ N
Sbjct: 865 TFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEV-----KSKLKGHQKRITGLAFSTALNIL 919
Query: 256 LSGSWDKTLRLWDL 297
+S D + W +
Sbjct: 920 VSSGADAQICFWSI 933
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 241 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
D N G D T+ ++++ + + + H K + +AFS
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFS 913
>At5g15120.1 68418.m01771 expressed protein
Length = 293
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 209 PISFLTLY-CPVMEITLFPVPGTKLSGFGILPLERQPGVSKTILRMFSPWHSQS 367
PI++L L+ C I +F +P + G++PL PG++ +F H +S
Sbjct: 120 PITYLHLHQCDQFSIGIFCLPPS-----GVIPLHNHPGMTVFSKLLFGTMHIKS 168
>At2g18810.1 68415.m02189 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 234
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 357
++S NY L W+K + L G R + H+ D+L A
Sbjct: 139 MTSTSNYVLGSGWNKVVTENILETGTRLRLWSFHSPDMLFFA 180
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 27.1 bits (57), Expect = 3.8
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +1
Query: 112 ILSSSRDKTLIVWKLT---RDETNYGLPQKRLYGHSHFISDVV-LSSDGNYALSGSWDKT 279
I++ S ++ + +KL D + L L+ + IS + ++ G A SG D T
Sbjct: 3 IIAGSYERFIWGFKLKPTKHDAESQTLTLSPLFSYPSHISPITTVACSGPAAASGGSDDT 62
Query: 280 LRLWDLAAGKTTRRFEDHTKDVLSVAFS 363
+ L+DL + + DH A S
Sbjct: 63 IHLYDLPSASSLGSLLDHNHAASITALS 90
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 259 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
SGS D +RLW+ G+ R D + + S+AF
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAF 195
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 259 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
SGS D +RLW+ G+ R D + + S+AF
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAF 195
>At2g31720.1 68415.m03871 expressed protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 313
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 232 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
++S NY L W+K + L G R + H+ D+L AF
Sbjct: 221 MTSTSNYVLGLGWNKVVTDNILQRGTRLRIWSFHSPDMLFFAF 263
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 61 HNGWITQIATNPKYPDMILSSSRDKTLIVWKL 156
H I I NP+ P ++ +SS D T +W L
Sbjct: 347 HERRINSIDFNPQNPHVMATSSTDGTACLWDL 378
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 286 LWDLAAGKTTRRFEDHTKDVLSVAFS 363
+WDL AGK+ +E H + + S+ F+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFN 357
>At4g01510.1 68417.m00194 transmembrane ARV1-like family protein
contains similarity to ARV1 [Homo sapiens]
gi|12044055|gb|AAG47671
Length = 252
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 231 YNVRNEMGVTVQTLLWQAVVGFV 163
YNV N+ VQ LLW+ V+ ++
Sbjct: 91 YNVVNQESANVQHLLWKLVLAYL 113
>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
subunit, putative similar to component of chloroplast
outer membrane translocon Toc64 [Pisum sativum]
GI:7453538; contains Pfam profiles PF01425: Amidase,
PF00515: TPR Domain
Length = 603
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 246 SITGQYNVRNEMGVTVQTLL 187
SI Y V+NEM T+Q+LL
Sbjct: 361 SIKSLYRVKNEMRATIQSLL 380
>At5g08250.1 68418.m00969 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 488
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 214 FISDVVLSSDGNYALSGSWDKTL 282
++SDV++S +G + G W TL
Sbjct: 24 WLSDVLISQNGTFRFRGPWFSTL 46
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +1
Query: 217 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 360
++ V + G+ L+G D + +WD+ + +HT V+ F
Sbjct: 481 VTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEHTAPVVYAFF 528
>At3g42530.1 68416.m04410 Ulp1 protease family similar to At5g28170,
At1g35110, At1g44880, At4g19320, At5g36020, At4g03970,
At3g43010, At2g10350; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 889
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 94 PKYPDMILSSSRDKTLIVWK-LTRDETNYGLPQ 189
P D++L S KT++ WK LT + LPQ
Sbjct: 241 PGLLDLLLDDSTSKTILHWKRLTHPKQVISLPQ 273
>At3g26220.1 68416.m03271 cytochrome P450 family protein identical
to cytochrome P450 monooxygenase (CYP71B3) GB:D78602
[Arabidopsis thaliana] (Plant Mol. Biol. 37 (1), 39-52
(1998))
Length = 501
Score = 25.8 bits (54), Expect = 8.8
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -2
Query: 348 ENILSMVFETPGCLSSGKIPKPESFVPGTGKSVISITGQYNVRNEMGVTVQTLLWQAVVG 169
E I ++FE G + + F G G + ++G++ +++ V V TLL + G
Sbjct: 198 EKIEELMFEVQ---KVGSLSSSDIFPAGVGWFMDFVSGRHKTLHKVFVEVDTLLNHVIDG 254
Query: 168 FVSS*FPHDKS 136
+ + P DK+
Sbjct: 255 HLKN--PEDKT 263
>At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing
protein / helicase and RNase D C-terminal
domain-containing protein / HRDC domain-containing
protein similar to SP|Q01780 Polymyositis/scleroderma
autoantigen 2 {Homo sapiens}; contains Pfam profiles
PF00570: HRDC domain, PF01612: 3'-5' exonuclease
Length = 738
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 281 SGFGILPLERQPGVSKTIL 337
SGFG+LPL+R+ KT++
Sbjct: 566 SGFGVLPLKRKLESDKTVV 584
>At1g19485.1 68414.m02427 AT hook motif-containing protein contains
Pfam profile: PF00730 HhH-GPD superfamily base excision
DNA repair protein; contains Pfam PF02178: AT hook
motif; contains Pfam PF00400: WD domain, G-beta repeat
(5 copies); contains Prosite PS00354: HMG-I and HMG-Y
DNA-binding domain (A+T-hook)
Length = 815
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 13 FIKMSETLKLRGTLCGHNGWI--TQIATNPKYPDMILSSSRDKTLIVWKLTRDETN 174
F+K++ K CG I T + PD +L+ D T+ +WK + +++
Sbjct: 417 FVKLAPVFKCSNLKCGDTKSIPLTVEWSTLGNPDFLLAGCHDGTVALWKFSTTKSS 472
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,639,300
Number of Sequences: 28952
Number of extensions: 174596
Number of successful extensions: 1229
Number of sequences better than 10.0: 225
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 477939072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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