Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A22
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   5.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   5.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   7.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.8  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -3

Query: 287 RRNSSRCPNISNYPYDCLVNFASSPCMLRSSHRSE*RC 174
           R N S    I+++  +C   +    C L+ SH     C
Sbjct: 116 RNNGSCVDRIADFECNCKNGWKGKTCSLKDSHCDHTTC 153


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 169 PAHRYSDL*DERSMHGDDAKFTRQSY 246
           P +   D+ D RS+HG   +   Q Y
Sbjct: 85  PPYDRMDIRDRRSLHGPQQQMDGQEY 110


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -1

Query: 370 DRFPVVTDRVRSDVKPSRTFVNFPVATYDEI 278
           D+F  +    R  +K    FV FP+   +++
Sbjct: 212 DKFEQINQHFRRQIKSVDLFVIFPLTKAEKV 242


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -1

Query: 370 DRFPVVTDRVRSDVKPSRTFVNFPVATYDEI 278
           D+F  +    R  +K    FV FP+   +++
Sbjct: 168 DKFEQINQHFRRQIKSVDLFVIFPLTKAEKV 198


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 477 LHYKWLGIDKFSPRKVLD 530
           +HY +LG++     K+LD
Sbjct: 56  VHYAFLGVNSDGTLKILD 73


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 28  VHLYNIHYIFKLEER 72
           ++LY I+Y FK  ER
Sbjct: 120 INLYTINYNFKESER 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,538
Number of Sequences: 336
Number of extensions: 3241
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)