Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A22
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.9  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   6.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 389 NYNNKEATNQQLEAVR 436
           NYN+KEA N+ ++ ++
Sbjct: 70  NYNDKEAVNEFMQLLK 85


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 389 NYNNKEATNQQLEAVR 436
           NYN+KEA N+ ++ ++
Sbjct: 70  NYNDKEAVNEFMQLLK 85


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 363 NLSGSASSVTTTIKRQRTSN 422
           NLS  +++ T++  R+ TSN
Sbjct: 608 NLSSGSNNQTSSASRENTSN 627


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,651
Number of Sequences: 438
Number of extensions: 4185
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)