Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A20
         (525 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6GZ99 Cluster: Msp2; n=7; Anaplasma phagocytophilum|Re...    36   0.75 
UniRef50_Q9ZZW2 Cluster: Putative uncharacterized mitochondrial ...    36   0.75 
UniRef50_Q5V1P4 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_A5C5Y8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  

>UniRef50_Q6GZ99 Cluster: Msp2; n=7; Anaplasma phagocytophilum|Rep:
           Msp2 - Anaplasma phagocytophilum (Ehrlichia
           phagocytophila)
          Length = 365

 Score = 35.5 bits (78), Expect = 0.75
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -3

Query: 514 SAERERLSLYPYTAAGCNATCDRMTKKFETMEKSFTLKKT*NYNFICNII 365
           S E  +L++ PYT AG   +   +TK    ++ S+ LK   NY F+ N +
Sbjct: 260 SMELVKLNISPYTCAGIGGSVIGITKGHANLQLSYKLKLGLNYRFLSNAV 309


>UniRef50_Q9ZZW2 Cluster: Putative uncharacterized mitochondrial
           protein Q0144; n=1; Saccharomyces cerevisiae|Rep:
           Putative uncharacterized mitochondrial protein Q0144 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 109

 Score = 35.5 bits (78), Expect = 0.75
 Identities = 20/88 (22%), Positives = 42/88 (47%)
 Frame = +1

Query: 142 FKNYVSNVCLFN*ANSYVTMEGVGSVRVLLSIANNVVGRVTNILNPFYVILEWSFISPLV 321
           +K Y+  + ++N  N+Y        + +++++  N+    T + NP+Y +L + +I  L+
Sbjct: 18  YKTYIIYIYIYNKWNNYNKNYNYNYIMIMITMGLNITCEQTVMFNPYYYLLYYMYIKMLM 77

Query: 322 *SIFTNIRCCRY*ELLYYK*SYNFMFSL 405
                 +    Y  +LYY   Y  MF +
Sbjct: 78  ------LMLMLYYIMLYYIMLYYIMFMI 99


>UniRef50_Q5V1P4 Cluster: Putative uncharacterized protein; n=1;
           Haloarcula marismortui|Rep: Putative uncharacterized
           protein - Haloarcula marismortui (Halobacterium
           marismortui)
          Length = 271

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +2

Query: 308 SVLWFNPSLLTLGVVGIRNYYITNKVIILCFL*SETFFH 424
           +VL   P L+T GV+G+RN YI   ++++  + +  F+H
Sbjct: 151 AVLLAGPYLITRGVIGLRNAYIAGTLLMVASIAAWVFWH 189


>UniRef50_A5C5Y8 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 595

 Score = 32.7 bits (71), Expect = 5.3
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 181 ANSYVTMEGVGSVRVLLSIANNVVGR-VTNILNPFYVILEWSFISP 315
           A  Y+T+  +G+  VLLS+A   V R   +   P Y   +WSF+ P
Sbjct: 178 AMQYLTLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYATSQWSFLVP 223


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,165,319
Number of Sequences: 1657284
Number of extensions: 9013714
Number of successful extensions: 17069
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17066
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)