Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A19
         (483 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.21 
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    24   0.85 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   2.6  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 221 CDFLLL*EQCRRVWNTKQLCR 283
           CD   L  +C+R++N KQ C+
Sbjct: 779 CDAKYLEIKCKRIYNEKQCCK 799


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 475 RSSSENCVRKLCESHFHVPSILYGHLRT 392
           R+ +  C   +C   F  P +L GH+RT
Sbjct: 2   RTHTLPCKCTICPKAFSRPWLLQGHIRT 29


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 468 HQRIAYGNSVKVTSTSRAYYTGTFELEXSPFCRRGVRPH 352
           HQ   YG +V+V     A        + S   R+G+ PH
Sbjct: 25  HQHQHYGAAVQVPQGGGAVQPDPGSCDPSVGLRQGIPPH 63


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 225 IFYYCESNVGGF 260
           IFYYC +  GGF
Sbjct: 436 IFYYCLAYNGGF 447


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 226 ITVICTVFYFYKFFGIFT 173
           I ++C V+YFY  F IFT
Sbjct: 108 IILLC-VYYFYYAFIIFT 124



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 208 VFYFYKFFGIFT 173
           ++YFY  F IFT
Sbjct: 212 IYYFYSAFIIFT 223



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 226 ITVICTVFYFYKFFGIFT 173
           I ++C ++YFY  F +FT
Sbjct: 233 IILLC-IYYFYYAFILFT 249


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -3

Query: 205 FYFYKFFGIFTSF 167
           +Y+Y FFG+  ++
Sbjct: 115 YYYYAFFGVHLAY 127


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 444 SVKVTSTSRAYYTGTFELEXSPFCRRGVR 358
           SVK  S+  A Y G F  E +     G+R
Sbjct: 96  SVKSESSQAAKYGGCFSGESTVLTSTGLR 124


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 454 VRKLCESHFHVPSILYGHLRT 392
           V ++C   +  PS L  HLRT
Sbjct: 251 VCRICGKSYARPSTLKTHLRT 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,048
Number of Sequences: 336
Number of extensions: 2745
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)