Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A19
         (483 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    24   0.74 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   3.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   3.0  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   3.0  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   3.0  

>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 24.2 bits (50), Expect = 0.74
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 475 RSSSENCVRKLCESHFHVPSILYGHLRT 392
           R+ +  C   LC   F  P +L GH+RT
Sbjct: 37  RTHTLPCKCHLCGKAFSRPWLLQGHIRT 64


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 365 ASDLTSSYAAXXXXXXXXXXXVTFLGPFCTIVSYSK 258
           A DLT +YA            +  LG +C +  Y++
Sbjct: 185 ALDLTPTYAVVSSSISFYVPCIVMLGIYCRLYCYAQ 220


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 220 VICTVFYFYKFFGIFTS 170
           V+C +  F++ FG++ S
Sbjct: 109 VMCRIMAFFRMFGLYLS 125


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 298 VTMTTGIDRDTIRAAY-EDVRSDASP 372
           +T+  GID+DT+ A Y E +  D  P
Sbjct: 14  LTVVRGIDQDTVVAKYMEYLMPDIMP 39


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 298 VTMTTGIDRDTIRAAY-EDVRSDASP 372
           +T+  GID+DT+ A Y E +  D  P
Sbjct: 14  LTVVRGIDQDTVVAKYMEYLMPDIMP 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,193
Number of Sequences: 438
Number of extensions: 3125
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)