Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A18
(474 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr 3... 29 0.27
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 27 1.5
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 1.5
SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces pomb... 26 3.4
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 26 3.4
SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase ... 26 3.4
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 26 3.4
SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 25 5.9
SPAC9E9.04 |||bcap family homolog|Schizosaccharomyces pombe|chr ... 25 7.8
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 7.8
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 25 7.8
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 25 7.8
>SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 455
Score = 29.5 bits (63), Expect = 0.27
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -3
Query: 403 ITESYRYLKSTHEHGNKPENSIKVYVRAMDISTW--TLAELNEAIANPATNPELIHYLET 230
++E +LK H + PE +K+ + TW LN+AI+N +N +
Sbjct: 381 LSELIDFLKREHPPEDTPEKRVKIKRIRTLLDTWQQEWRILNKAISNAESNS---GRGQN 437
Query: 229 ARTKLTSESEFQNKET 182
++TK TS + +NK T
Sbjct: 438 SKTKTTSVNLSRNKRT 453
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 27.1 bits (57), Expect = 1.5
Identities = 14/66 (21%), Positives = 35/66 (53%)
Frame = -3
Query: 466 TMEELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSIKVYVRAMDISTWTLAEL 287
T+ +++ A+++ ST+ + P + Y++ N+P +S+ V + ++ W+ E+
Sbjct: 202 TITDIETALQNMSTSASRTPNDSSPLPYIE------NRPASSLAVSEKIQNVPNWSTEEV 255
Query: 286 NEAIAN 269
E + N
Sbjct: 256 VEWLMN 261
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 27.1 bits (57), Expect = 1.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 457 ELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSIKVY 329
E DE +K+PS + S YL ++ N+PEN K +
Sbjct: 282 EDDELVKNPSVTKGHPEIHESSENYLSRSNTVENEPENIEKQF 324
>SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 415
Score = 25.8 bits (54), Expect = 3.4
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 268 PATNPELIHYLETARTKLTSESEFQN-KETISIVTKVGLVHKVPNLQ 131
P +PE+ HY+++ KL + + ++ I VT+ LV + +Q
Sbjct: 161 PDYDPEIFHYMQSLERKLAPPPNYMSVQQEIDWVTRHMLVDWIVQVQ 207
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 25.8 bits (54), Expect = 3.4
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = -3
Query: 424 NPNYLPAITESYRYLKSTHEHGNKPENSIKVYVRAMDISTWTLAELNEAIAN---PATNP 254
+PNY PA T Y + H+ + K + +A ++ + E EA+A A
Sbjct: 571 DPNYAPAYTSLGLYYRDIHD----MVRATKCFQKAFELDA-SQVEAAEALAKTFAEANEW 625
Query: 253 ELIHYLETARTKLTSESEFQNKE 185
EL+ + + R TSE++ + K+
Sbjct: 626 ELVEVI-SRRVLNTSENDLKRKK 647
>SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase
Ade6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 552
Score = 25.8 bits (54), Expect = 3.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 262 TNPELIHYLETARTKLTSESEFQNKETISIVTKVGLVHKVP 140
T+P+ I L T LT+E E N + ++ VTK V P
Sbjct: 55 TDPDAIVELSKKCTLLTTEIEHINTDALAAVTKSVAVEPSP 95
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 3.4
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = -3
Query: 451 DEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSIKVYVRAMDISTWTLAELNEAIA 272
D I+ + L AI + K + NK + ++ ++ S L E E ++
Sbjct: 51 DMGIESVGHRIDILSAIQSMKKQQKDKLQQENKDQE-----LKNIEESYKKLEEKTEHLS 105
Query: 271 NPATNPEL-IHYLETARTKLTSESEFQNKETISIVTKVGL 155
+ + E + YLET TKL N E + ++ K+ +
Sbjct: 106 DDNVSLEKRVEYLETENTKLVKTLNSLNSEFLQLLRKIAI 145
>SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 540
Score = 25.0 bits (52), Expect = 5.9
Identities = 10/42 (23%), Positives = 26/42 (61%)
Frame = -3
Query: 463 MEELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSI 338
+E+ +++IK+ + N N+ + E+Y+ + H+ + P N++
Sbjct: 101 LEKTNDSIKE-TKNENFRMDVLETYKCKQLNHQTTHLPTNTV 141
>SPAC9E9.04 |||bcap family homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 188
Score = 24.6 bits (51), Expect = 7.8
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 346 NSIKVYVRAMDISTWTLAELNEAIANPATNPELIHYLETARTKL-TSESEFQN-KETISI 173
N + + AM + + L + N + + LET RTKL T + E++ E +
Sbjct: 118 NRYYLALEAMIAAQDKMQALQTQVEASTNNAKAVEELETLRTKLETRDKEYETLAEKYAA 177
Query: 172 VTK 164
VTK
Sbjct: 178 VTK 180
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 24.6 bits (51), Expect = 7.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 460 EELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKP 350
EEL ++I+ T+P+ P I + L EH +KP
Sbjct: 1185 EELVKSIEIALTSPHISPEIIQILLNLAEFMEHDDKP 1221
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 24.6 bits (51), Expect = 7.8
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -3
Query: 442 IKDPSTNPNYLPAITESYRYLK--STHEHGNKPENSIKV-YVRAMDISTWTLA-ELNEAI 275
+KD +NP P + S ++LK + +G + SIK+ + +++ W ++ + + I
Sbjct: 856 MKDSHSNPPVSPKYSSSQKHLKVERINIYGEQTRKSIKIRKIIDSEVTEWDVSVDDSGCI 915
Query: 274 ANP 266
NP
Sbjct: 916 RNP 918
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 24.6 bits (51), Expect = 7.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 277 IANPATNPELIHYLETARTKLTSESEFQNKETISI 173
I NP NP L+ E AR+K E +NK+ ++I
Sbjct: 79 IQNPEQNPFLLSKEEAARSKQKQE---KNKDRLTI 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,618,102
Number of Sequences: 5004
Number of extensions: 29680
Number of successful extensions: 90
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 182448900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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