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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A15
         (539 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      317   4e-87
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             312   9e-86
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              312   9e-86
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         311   3e-85
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              310   6e-85
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             182   2e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)             145   2e-35
SB_54| Best HMM Match : Actin (HMM E-Value=0)                         100   7e-22
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)             85   3e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  74   9e-14
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)                  60   2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                 55   3e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               55   3e-08
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)                     54   6e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  48   4e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.001
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.46 
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    31   0.46 
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.80 
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.1  
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)              30   1.1  
SB_49135| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)               29   3.2  
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)                     28   4.2  
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_48702| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.4  
SB_42812| Best HMM Match : RVT_1 (HMM E-Value=8.4e-19)                 27   7.4  
SB_38643| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.4  
SB_9012| Best HMM Match : MobA_MobL (HMM E-Value=0.014)                27   7.4  
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)                  27   9.8  
SB_11543| Best HMM Match : Synaptobrevin (HMM E-Value=0.00034)         27   9.8  

>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  317 bits (778), Expect = 4e-87
 Identities = 145/152 (95%), Positives = 150/152 (98%)
 Frame = +3

Query: 84  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 264 SKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKM 443
           SKRGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 444 TQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
           TQ MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152


>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  312 bits (767), Expect = 9e-86
 Identities = 144/152 (94%), Positives = 149/152 (98%)
 Frame = +3

Query: 84  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
           M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 264 SKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKM 443
           SKRGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 444 TQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
           TQ MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  312 bits (767), Expect = 9e-86
 Identities = 142/152 (93%), Positives = 149/152 (98%)
 Frame = +3

Query: 84  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
           M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 264 SKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKM 443
           SKRGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 444 TQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
           TQ MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  311 bits (763), Expect = 3e-85
 Identities = 143/150 (95%), Positives = 148/150 (98%)
 Frame = +3

Query: 90  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
           ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 270 RGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQ 449
           RGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 450 XMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
            MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGI 151


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  310 bits (760), Expect = 6e-85
 Identities = 142/150 (94%), Positives = 148/150 (98%)
 Frame = +3

Query: 90  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
           +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 270 RGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQ 449
           RGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 450 XMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
            MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGI 151


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  182 bits (442), Expect = 2e-46
 Identities = 82/89 (92%), Positives = 86/89 (96%)
 Frame = +3

Query: 90  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
           D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 270 RGILTLKYPIEHGIVTNWDDLEKIWHHTF 356
           RGILTLKYPIEHGIVTNWDD+EKI   TF
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIMFETF 90



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +3

Query: 429 NREKMTQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
           N + M + MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 78  NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGI 114


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score =  145 bits (351), Expect = 2e-35
 Identities = 69/149 (46%), Positives = 97/149 (65%), Gaps = 3/149 (2%)
 Frame = +3

Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 275
           + +V DNG+G  K G+AG + P  +FPS+VGRP  R    +  +  KD  VGDEA   R 
Sbjct: 7   SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66

Query: 276 ILTLKYPIEHGIVTNWDDLEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
           +L + YP+++GIV NWDD++ +W +TF  +++ + P    VLLTE PLNP  NREKM + 
Sbjct: 67  MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126

Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
           MFE +    +Y+A QAVL+LYA G  TG+
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGV 155


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score =  100 bits (240), Expect = 7e-22
 Identities = 46/67 (68%), Positives = 55/67 (82%)
 Frame = +3

Query: 336  KIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETFNTPAMYVAXQAVLSLY 515
            K+W H F ++LRV  E+ PVLLTEAPLNP+ NRE+M Q MFE+FN P MYVA QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188

Query: 516  ASGRTTG 536
            ASGRTTG
Sbjct: 2189 ASGRTTG 2195



 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = +3

Query: 108  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209
            +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score = 85.0 bits (201), Expect = 3e-17
 Identities = 36/52 (69%), Positives = 44/52 (84%)
 Frame = +3

Query: 384 EHPVLLTEAPLNPEANREKMTQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
           +HPVLLTEAPLNP  NREK  +  FETFN PA++++ QAVLSLYA+GRTTG+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGV 177


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 73.7 bits (173), Expect = 9e-14
 Identities = 30/82 (36%), Positives = 52/82 (63%)
 Frame = +3

Query: 294 PIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETFNT 473
           PI+ G++ +WD  EKI  + +   ++     HP+L++EA  N    REK+T+ MFE +N 
Sbjct: 3   PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62

Query: 474 PAMYVAXQAVLSLYASGRTTGI 539
           PA ++   +VL+ +A+GR+ G+
Sbjct: 63  PAFFLCKNSVLTAFANGRSNGL 84


>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
          Length = 1392

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = +3

Query: 93   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209
            E    LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
 Frame = +3

Query: 105 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRG 275
           A+V+DNG G+ K GFAGD  PR + P++VG P+   +++G  +  KD    GD A +K G
Sbjct: 702 AIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSG 761

Query: 276 ILTL 287
           ++ L
Sbjct: 762 VMHL 765


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 25/60 (41%), Positives = 34/60 (56%)
 Frame = +3

Query: 222 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLL 401
           G+   D ++GDEA  K    T K+PI H IV +WD +E+ W    +  LR  PE+H  LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336


>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
          Length = 152

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +3

Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
           MFE FN+PA+YVA QAVLSLYASGRTTG+
Sbjct: 2   MFEAFNSPAVYVAIQAVLSLYASGRTTGV 30


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
 Frame = +3

Query: 96  EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 275
           ++A LV+D G+   K GFA + APR++ P+ + + + +       ++  ++GD+ +  + 
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283

Query: 276 ILTLKY--PIEHGIVTNWDDLEKIWHHTFYNE 365
              L Y  P + G + NWD  ++IW +TF  E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315


>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = -1

Query: 206 VTRSPHDRGKYGAGSVVSRETGFAHSGPIVYDQRGNFLV 90
           + RS  D G+ G+GS+VS ETG AH+G I+ +Q  + +V
Sbjct: 1   MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39


>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 181 GNTARGASSPAKPALHIPDPLSTT 110
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 181 GNTARGASSPAKPALHIPDPLSTT 110
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 30.7 bits (66), Expect = 0.80
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 285 LKYPIEHGIVTNWDDLEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPEANRE 437
           L+ P +  +VT+++  E++  H F +     P    HPV++TE   NP   R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183


>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 181 GNTARGASSPAKPALHIPDPLSTT 110
           GNT R    PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563


>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
          Length = 434

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +1

Query: 385 STQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT*LSRPCSH 510
           ST +  P +P    PT        S P+THP  T  S P +H
Sbjct: 112 STPTTHPHIPHASTPTTHPHITHASTPTTHPHITHASTPTTH 153



 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 385 STQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT*LSRPCSH 510
           ST +  P +     PT        S P+THP  T  S P +H
Sbjct: 124 STPTTHPHITHASTPTTHPHITHASTPTTHPHITHASTPTTH 165



 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 385 STQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT*LSRPCSH 510
           ST +  P +P     T        S P+THP  T  S P +H
Sbjct: 182 STPTTHPHIPHASTTTTHPYIARASTPTTHPHITHASTPTTH 223


>SB_49135| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 824

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 338 LLQIVPVGDDAVFDGVFECEDTPLALCLITYVGVLLT 228
           LL++VP  D  + + + E ED  L  CL   +GV  T
Sbjct: 310 LLKLVPNLDTCIEESLTESEDVELGRCLYNNIGVQCT 346


>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2190

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -2

Query: 520  DAYSESTAWXATYMAGVLKVSNXICVIFSLLASGLR 413
            D  SE     AT+ AG L +   IC+++ LLA   R
Sbjct: 1839 DEESEMFRQAATWSAGALGILTVICLLYELLARSRR 1874


>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
          Length = 284

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +3

Query: 297 IEHGIVTNWDDLEKIWHHTFYNEL-RVAPEEHPVLLTEAPLN-PE 425
           +E G    W+DL  +  HTF  +L + A E +P  L+E PLN PE
Sbjct: 48  LEKGKNQAWEDLRSVNAHTFDVKLFKEADESYP--LSEKPLNAPE 90


>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 970

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +1

Query: 349 TPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT 486
           T +T+     P +TQ  +  LPST +PT  +     + PST  P T
Sbjct: 225 TTTTIPSTKQPTTTQQTTTTLPSTKQPTTTQ-QTTTTLPSTKQPTT 269



 Score = 27.9 bits (59), Expect = 5.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 349 TPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT 486
           T +T+     P +TQ  +  +PST +PT  +     + PST  P T
Sbjct: 209 TTTTLPSTKQPTTTQQTTTTIPSTKQPTTTQ-QTTTTLPSTKQPTT 253


>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
          Length = 709

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +2

Query: 200 SSPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRH 316
           S  G HGR G+EG L R    EQ       +   TRH H
Sbjct: 134 SCGGIHGREGTEGKLNRNRKPEQGTGKRNMMLAETRHTH 172


>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 181 GNTARGASSPAKPALHIPDPLSTT 110
           GNT R     AKPAL++P P S T
Sbjct: 40  GNTNRRTRIQAKPALNLPSPPSKT 63


>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 635

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 181 GNTARGASSPAKPALHIPDPLSTT 110
           GNT R    PAKP L IP P + T
Sbjct: 68  GNTNRRTRIPAKPTLTIPSPPTKT 91


>SB_48702| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 531

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 324 DDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETFNTP 476
           + LEK+   TF    ++    HP  L  A L   A+R   T   F  +N P
Sbjct: 286 EPLEKLLQETFGENTKMTAVTHPKTLVTAVL---ADRRPATLYFFRNYNMP 333


>SB_42812| Best HMM Match : RVT_1 (HMM E-Value=8.4e-19)
          Length = 769

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 341 DLLQIVPVGDDAVFDGVFECEDTPLALCLITYVGVLL 231
           D L  +PVG DA FDG  +  DT   +C  T +  ++
Sbjct: 320 DALSRLPVGPDAQFDGKEDSADTD-CICTKTVLATVM 355


>SB_38643| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 169

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 379 PRSTQSCSPKLPSTPKPT 432
           P+S  +C+P  PS PKP+
Sbjct: 1   PKSLHACAPPKPSVPKPS 18


>SB_9012| Best HMM Match : MobA_MobL (HMM E-Value=0.014)
          Length = 125

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 327 DLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETF 467
           D E +W+   + E R+  +E   LL   P NPE   +KM   M   F
Sbjct: 3   DFEILWNKAQFAEKRINSQEAKELLLALPDNPEIT-DKMRLEMTRGF 48


>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
          Length = 766

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 206
           + +++D GS   KAGFA ++A +  + S++G   H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516


>SB_11543| Best HMM Match : Synaptobrevin (HMM E-Value=0.00034)
          Length = 629

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +1

Query: 94  RKLPRWS*TMGPECAKPVSR-ETTLPAPYFPRSWGDLVTR 210
           R++PR S  M P  A+PVS+  +++P+P  P+  G  V+R
Sbjct: 296 REVPRLSHQMSP-AAEPVSQLMSSIPSPGMPQGAGHGVSR 334


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,015,102
Number of Sequences: 59808
Number of extensions: 427461
Number of successful extensions: 1270
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1227799733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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