BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0002_A15 (539 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_56628| Best HMM Match : Actin (HMM E-Value=0) 317 4e-87 SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 312 9e-86 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 312 9e-86 SB_56| Best HMM Match : Actin (HMM E-Value=0) 311 3e-85 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 310 6e-85 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 2e-35 SB_54| Best HMM Match : Actin (HMM E-Value=0) 100 7e-22 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 85 3e-17 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 74 9e-14 SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 55 3e-08 SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 3e-08 SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 54 6e-08 SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 48 4e-06 SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001 SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46 SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.46 SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80 SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1 SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 30 1.1 SB_49135| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4 SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 29 3.2 SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2 SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 28 4.2 SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2 SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2 SB_48702| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4 SB_42812| Best HMM Match : RVT_1 (HMM E-Value=8.4e-19) 27 7.4 SB_38643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4 SB_9012| Best HMM Match : MobA_MobL (HMM E-Value=0.014) 27 7.4 SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 9.8 SB_11543| Best HMM Match : Synaptobrevin (HMM E-Value=0.00034) 27 9.8 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 317 bits (778), Expect = 4e-87 Identities = 145/152 (95%), Positives = 150/152 (98%) Frame = +3 Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263 MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 264 SKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKM 443 SKRGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 444 TQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539 TQ MFETFN+PAMYVA QAVLSLYASGRTTGI Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 312 bits (767), Expect = 9e-86 Identities = 144/152 (94%), Positives = 149/152 (98%) Frame = +3 Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263 M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 264 SKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKM 443 SKRGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 444 TQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539 TQ MFETFN+PAMYVA QAVLSLYASGRTTGI Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 312 bits (767), Expect = 9e-86 Identities = 142/152 (93%), Positives = 149/152 (98%) Frame = +3 Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263 M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 264 SKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKM 443 SKRGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKM Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120 Query: 444 TQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539 TQ MFETFN+PAMYVA QAVLSLYASGRTTGI Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 311 bits (763), Expect = 3e-85 Identities = 143/150 (95%), Positives = 148/150 (98%) Frame = +3 Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269 ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 270 RGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQ 449 RGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKMTQ Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121 Query: 450 XMFETFNTPAMYVAXQAVLSLYASGRTTGI 539 MFETFN+PAMYVA QAVLSLYASGRTTGI Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGI 151 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 310 bits (760), Expect = 6e-85 Identities = 142/150 (94%), Positives = 148/150 (98%) Frame = +3 Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269 +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 270 RGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQ 449 RGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKMTQ Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121 Query: 450 XMFETFNTPAMYVAXQAVLSLYASGRTTGI 539 MFETFN+PAMYVA QAVLSLYASGRTTGI Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGI 151 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 182 bits (442), Expect = 2e-46 Identities = 82/89 (92%), Positives = 86/89 (96%) Frame = +3 Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269 D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Query: 270 RGILTLKYPIEHGIVTNWDDLEKIWHHTF 356 RGILTLKYPIEHGIVTNWDD+EKI TF Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90 Score = 61.7 bits (143), Expect = 4e-10 Identities = 29/37 (78%), Positives = 32/37 (86%) Frame = +3 Query: 429 NREKMTQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539 N + M + MFETFN+PAMYVA QAVLSLYASGRTTGI Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGI 114 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 145 bits (351), Expect = 2e-35 Identities = 69/149 (46%), Positives = 97/149 (65%), Gaps = 3/149 (2%) Frame = +3 Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 275 + +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66 Query: 276 ILTLKYPIEHGIVTNWDDLEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452 +L + YP+++GIV NWDD++ +W +TF +++ + P VLLTE PLNP NREKM + Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126 Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539 MFE + +Y+A QAVL+LYA G TG+ Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGV 155 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 100 bits (240), Expect = 7e-22 Identities = 46/67 (68%), Positives = 55/67 (82%) Frame = +3 Query: 336 KIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETFNTPAMYVAXQAVLSLY 515 K+W H F ++LRV E+ PVLLTEAPLNP+ NRE+M Q MFE+FN P MYVA QAV++LY Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188 Query: 516 ASGRTTG 536 ASGRTTG Sbjct: 2189 ASGRTTG 2195 Score = 59.7 bits (138), Expect = 2e-09 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = +3 Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209 +V+DNGSG CKAG + D++PR VFP+IVGRPRH+ Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 85.0 bits (201), Expect = 3e-17 Identities = 36/52 (69%), Positives = 44/52 (84%) Frame = +3 Query: 384 EHPVLLTEAPLNPEANREKMTQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539 +HPVLLTEAPLNP NREK + FETFN PA++++ QAVLSLYA+GRTTG+ Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGV 177 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 73.7 bits (173), Expect = 9e-14 Identities = 30/82 (36%), Positives = 52/82 (63%) Frame = +3 Query: 294 PIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETFNT 473 PI+ G++ +WD EKI + + ++ HP+L++EA N REK+T+ MFE +N Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62 Query: 474 PAMYVAXQAVLSLYASGRTTGI 539 PA ++ +VL+ +A+GR+ G+ Sbjct: 63 PAFFLCKNSVLTAFANGRSNGL 84 >SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) Length = 1392 Score = 59.7 bits (138), Expect = 2e-09 Identities = 27/39 (69%), Positives = 29/39 (74%) Frame = +3 Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209 E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 55.2 bits (127), Expect = 3e-08 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%) Frame = +3 Query: 105 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRG 275 A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD GD A +K G Sbjct: 702 AIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSG 761 Query: 276 ILTL 287 ++ L Sbjct: 762 VMHL 765 >SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) Length = 372 Score = 55.2 bits (127), Expect = 3e-08 Identities = 25/60 (41%), Positives = 34/60 (56%) Frame = +3 Query: 222 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLL 401 G+ D ++GDEA K T K+PI H IV +WD +E+ W + LR PE+H LL Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336 >SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) Length = 152 Score = 54.4 bits (125), Expect = 6e-08 Identities = 24/29 (82%), Positives = 27/29 (93%) Frame = +3 Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539 MFE FN+PA+YVA QAVLSLYASGRTTG+ Sbjct: 2 MFEAFNSPAVYVAIQAVLSLYASGRTTGV 30 >SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) Length = 580 Score = 48.4 bits (110), Expect = 4e-06 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Frame = +3 Query: 96 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 275 ++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + + Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283 Query: 276 ILTLKY--PIEHGIVTNWDDLEKIWHHTFYNE 365 L Y P + G + NWD ++IW +TF E Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315 >SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 40.3 bits (90), Expect = 0.001 Identities = 18/39 (46%), Positives = 27/39 (69%) Frame = -1 Query: 206 VTRSPHDRGKYGAGSVVSRETGFAHSGPIVYDQRGNFLV 90 + RS D G+ G+GS+VS ETG AH+G I+ +Q + +V Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39 >SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 120 Score = 31.5 bits (68), Expect = 0.46 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -2 Query: 181 GNTARGASSPAKPALHIPDPLSTT 110 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) Length = 170 Score = 31.5 bits (68), Expect = 0.46 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -2 Query: 181 GNTARGASSPAKPALHIPDPLSTT 110 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 220 Score = 30.7 bits (66), Expect = 0.80 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +3 Query: 285 LKYPIEHGIVTNWDDLEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPEANRE 437 L+ P + +VT+++ E++ H F + P HPV++TE NP R+ Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183 >SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 30.3 bits (65), Expect = 1.1 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -2 Query: 181 GNTARGASSPAKPALHIPDPLSTT 110 GNT R PAKP+L++P P S T Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563 >SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) Length = 434 Score = 30.3 bits (65), Expect = 1.1 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +1 Query: 385 STQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT*LSRPCSH 510 ST + P +P PT S P+THP T S P +H Sbjct: 112 STPTTHPHIPHASTPTTHPHITHASTPTTHPHITHASTPTTH 153 Score = 27.1 bits (57), Expect = 9.8 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +1 Query: 385 STQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT*LSRPCSH 510 ST + P + PT S P+THP T S P +H Sbjct: 124 STPTTHPHITHASTPTTHPHITHASTPTTHPHITHASTPTTH 165 Score = 27.1 bits (57), Expect = 9.8 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +1 Query: 385 STQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT*LSRPCSH 510 ST + P +P T S P+THP T S P +H Sbjct: 182 STPTTHPHIPHASTTTTHPYIARASTPTTHPHITHASTPTTH 223 >SB_49135| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 824 Score = 29.1 bits (62), Expect = 2.4 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 Query: 338 LLQIVPVGDDAVFDGVFECEDTPLALCLITYVGVLLT 228 LL++VP D + + + E ED L CL +GV T Sbjct: 310 LLKLVPNLDTCIEESLTESEDVELGRCLYNNIGVQCT 346 >SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2190 Score = 28.7 bits (61), Expect = 3.2 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -2 Query: 520 DAYSESTAWXATYMAGVLKVSNXICVIFSLLASGLR 413 D SE AT+ AG L + IC+++ LLA R Sbjct: 1839 DEESEMFRQAATWSAGALGILTVICLLYELLARSRR 1874 >SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) Length = 284 Score = 28.7 bits (61), Expect = 3.2 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +3 Query: 297 IEHGIVTNWDDLEKIWHHTFYNEL-RVAPEEHPVLLTEAPLN-PE 425 +E G W+DL + HTF +L + A E +P L+E PLN PE Sbjct: 48 LEKGKNQAWEDLRSVNAHTFDVKLFKEADESYP--LSEKPLNAPE 90 >SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 970 Score = 28.3 bits (60), Expect = 4.2 Identities = 16/46 (34%), Positives = 23/46 (50%) Frame = +1 Query: 349 TPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT 486 T +T+ P +TQ + LPST +PT + + PST P T Sbjct: 225 TTTTIPSTKQPTTTQQTTTTLPSTKQPTTTQ-QTTTTLPSTKQPTT 269 Score = 27.9 bits (59), Expect = 5.6 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +1 Query: 349 TPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT 486 T +T+ P +TQ + +PST +PT + + PST P T Sbjct: 209 TTTTLPSTKQPTTTQQTTTTIPSTKQPTTTQ-QTTTTLPSTKQPTT 253 >SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) Length = 709 Score = 28.3 bits (60), Expect = 4.2 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +2 Query: 200 SSPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRH 316 S G HGR G+EG L R EQ + TRH H Sbjct: 134 SCGGIHGREGTEGKLNRNRKPEQGTGKRNMMLAETRHTH 172 >SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 28.3 bits (60), Expect = 4.2 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -2 Query: 181 GNTARGASSPAKPALHIPDPLSTT 110 GNT R AKPAL++P P S T Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63 >SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 635 Score = 28.3 bits (60), Expect = 4.2 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 Query: 181 GNTARGASSPAKPALHIPDPLSTT 110 GNT R PAKP L IP P + T Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91 >SB_48702| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 531 Score = 27.5 bits (58), Expect = 7.4 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = +3 Query: 324 DDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETFNTP 476 + LEK+ TF ++ HP L A L A+R T F +N P Sbjct: 286 EPLEKLLQETFGENTKMTAVTHPKTLVTAVL---ADRRPATLYFFRNYNMP 333 >SB_42812| Best HMM Match : RVT_1 (HMM E-Value=8.4e-19) Length = 769 Score = 27.5 bits (58), Expect = 7.4 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 Query: 341 DLLQIVPVGDDAVFDGVFECEDTPLALCLITYVGVLL 231 D L +PVG DA FDG + DT +C T + ++ Sbjct: 320 DALSRLPVGPDAQFDGKEDSADTD-CICTKTVLATVM 355 >SB_38643| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 169 Score = 27.5 bits (58), Expect = 7.4 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +1 Query: 379 PRSTQSCSPKLPSTPKPT 432 P+S +C+P PS PKP+ Sbjct: 1 PKSLHACAPPKPSVPKPS 18 >SB_9012| Best HMM Match : MobA_MobL (HMM E-Value=0.014) Length = 125 Score = 27.5 bits (58), Expect = 7.4 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +3 Query: 327 DLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETF 467 D E +W+ + E R+ +E LL P NPE +KM M F Sbjct: 3 DFEILWNKAQFAEKRINSQEAKELLLALPDNPEIT-DKMRLEMTRGF 48 >SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) Length = 766 Score = 27.1 bits (57), Expect = 9.8 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +3 Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 206 + +++D GS KAGFA ++A + + S++G H Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516 >SB_11543| Best HMM Match : Synaptobrevin (HMM E-Value=0.00034) Length = 629 Score = 27.1 bits (57), Expect = 9.8 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +1 Query: 94 RKLPRWS*TMGPECAKPVSR-ETTLPAPYFPRSWGDLVTR 210 R++PR S M P A+PVS+ +++P+P P+ G V+R Sbjct: 296 REVPRLSHQMSP-AAEPVSQLMSSIPSPGMPQGAGHGVSR 334 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,015,102 Number of Sequences: 59808 Number of extensions: 427461 Number of successful extensions: 1270 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1258 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1227799733 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -