Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A15
(539 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 317 4e-87
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 312 9e-86
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 312 9e-86
SB_56| Best HMM Match : Actin (HMM E-Value=0) 311 3e-85
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 310 6e-85
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 2e-35
SB_54| Best HMM Match : Actin (HMM E-Value=0) 100 7e-22
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 85 3e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 74 9e-14
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 55 3e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 3e-08
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 54 6e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 48 4e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.46
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 30 1.1
SB_49135| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 29 3.2
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 28 4.2
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_48702| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_42812| Best HMM Match : RVT_1 (HMM E-Value=8.4e-19) 27 7.4
SB_38643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_9012| Best HMM Match : MobA_MobL (HMM E-Value=0.014) 27 7.4
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 9.8
SB_11543| Best HMM Match : Synaptobrevin (HMM E-Value=0.00034) 27 9.8
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 317 bits (778), Expect = 4e-87
Identities = 145/152 (95%), Positives = 150/152 (98%)
Frame = +3
Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 264 SKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKM 443
SKRGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 444 TQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
TQ MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 312 bits (767), Expect = 9e-86
Identities = 144/152 (94%), Positives = 149/152 (98%)
Frame = +3
Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 264 SKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKM 443
SKRGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 444 TQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
TQ MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 312 bits (767), Expect = 9e-86
Identities = 142/152 (93%), Positives = 149/152 (98%)
Frame = +3
Query: 84 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 263
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 264 SKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKM 443
SKRGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 444 TQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
TQ MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 311 bits (763), Expect = 3e-85
Identities = 143/150 (95%), Positives = 148/150 (98%)
Frame = +3
Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 270 RGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQ 449
RGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 450 XMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGI 151
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 310 bits (760), Expect = 6e-85
Identities = 142/150 (94%), Positives = 148/150 (98%)
Frame = +3
Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 270 RGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQ 449
RGILTLKYPIEHGIVTNWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 450 XMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGI 151
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 182 bits (442), Expect = 2e-46
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +3
Query: 90 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 269
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 270 RGILTLKYPIEHGIVTNWDDLEKIWHHTF 356
RGILTLKYPIEHGIVTNWDD+EKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 429 NREKMTQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
N + M + MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGI 114
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 145 bits (351), Expect = 2e-35
Identities = 69/149 (46%), Positives = 97/149 (65%), Gaps = 3/149 (2%)
Frame = +3
Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 275
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 276 ILTLKYPIEHGIVTNWDDLEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
+L + YP+++GIV NWDD++ +W +TF +++ + P VLLTE PLNP NREKM +
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFE + +Y+A QAVL+LYA G TG+
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGV 155
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 100 bits (240), Expect = 7e-22
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = +3
Query: 336 KIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETFNTPAMYVAXQAVLSLY 515
K+W H F ++LRV E+ PVLLTEAPLNP+ NRE+M Q MFE+FN P MYVA QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 516 ASGRTTG 536
ASGRTTG
Sbjct: 2189 ASGRTTG 2195
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 85.0 bits (201), Expect = 3e-17
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 384 EHPVLLTEAPLNPEANREKMTQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
+HPVLLTEAPLNP NREK + FETFN PA++++ QAVLSLYA+GRTTG+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGV 177
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 73.7 bits (173), Expect = 9e-14
Identities = 30/82 (36%), Positives = 52/82 (63%)
Frame = +3
Query: 294 PIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETFNT 473
PI+ G++ +WD EKI + + ++ HP+L++EA N REK+T+ MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 474 PAMYVAXQAVLSLYASGRTTGI 539
PA ++ +VL+ +A+GR+ G+
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGL 84
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 209
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +3
Query: 105 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRG 275
A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD GD A +K G
Sbjct: 702 AIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSG 761
Query: 276 ILTL 287
++ L
Sbjct: 762 VMHL 765
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 55.2 bits (127), Expect = 3e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +3
Query: 222 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLL 401
G+ D ++GDEA K T K+PI H IV +WD +E+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 54.4 bits (125), Expect = 6e-08
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +3
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFE FN+PA+YVA QAVLSLYASGRTTG+
Sbjct: 2 MFEAFNSPAVYVAIQAVLSLYASGRTTGV 30
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +3
Query: 96 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 275
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 276 ILTLKY--PIEHGIVTNWDDLEKIWHHTFYNE 365
L Y P + G + NWD ++IW +TF E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = -1
Query: 206 VTRSPHDRGKYGAGSVVSRETGFAHSGPIVYDQRGNFLV 90
+ RS D G+ G+GS+VS ETG AH+G I+ +Q + +V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.46
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 181 GNTARGASSPAKPALHIPDPLSTT 110
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.46
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 181 GNTARGASSPAKPALHIPDPLSTT 110
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 30.7 bits (66), Expect = 0.80
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 285 LKYPIEHGIVTNWDDLEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPEANRE 437
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 181 GNTARGASSPAKPALHIPDPLSTT 110
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
Length = 434
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 385 STQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT*LSRPCSH 510
ST + P +P PT S P+THP T S P +H
Sbjct: 112 STPTTHPHIPHASTPTTHPHITHASTPTTHPHITHASTPTTH 153
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 385 STQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT*LSRPCSH 510
ST + P + PT S P+THP T S P +H
Sbjct: 124 STPTTHPHITHASTPTTHPHITHASTPTTHPHITHASTPTTH 165
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 385 STQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT*LSRPCSH 510
ST + P +P T S P+THP T S P +H
Sbjct: 182 STPTTHPHIPHASTTTTHPYIARASTPTTHPHITHASTPTTH 223
>SB_49135| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 338 LLQIVPVGDDAVFDGVFECEDTPLALCLITYVGVLLT 228
LL++VP D + + + E ED L CL +GV T
Sbjct: 310 LLKLVPNLDTCIEESLTESEDVELGRCLYNNIGVQCT 346
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 520 DAYSESTAWXATYMAGVLKVSNXICVIFSLLASGLR 413
D SE AT+ AG L + IC+++ LLA R
Sbjct: 1839 DEESEMFRQAATWSAGALGILTVICLLYELLARSRR 1874
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 297 IEHGIVTNWDDLEKIWHHTFYNEL-RVAPEEHPVLLTEAPLN-PE 425
+E G W+DL + HTF +L + A E +P L+E PLN PE
Sbjct: 48 LEKGKNQAWEDLRSVNAHTFDVKLFKEADESYP--LSEKPLNAPE 90
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 349 TPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT 486
T +T+ P +TQ + LPST +PT + + PST P T
Sbjct: 225 TTTTIPSTKQPTTTQQTTTTLPSTKQPTTTQ-QTTTTLPSTKQPTT 269
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 349 TPSTMSCV*LPRSTQSCSPKLPSTPKPTERR*HRXCSRPSTHPPCT 486
T +T+ P +TQ + +PST +PT + + PST P T
Sbjct: 209 TTTTLPSTKQPTTTQQTTTTIPSTKQPTTTQ-QTTTTLPSTKQPTT 253
>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 709
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 200 SSPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRH 316
S G HGR G+EG L R EQ + TRH H
Sbjct: 134 SCGGIHGREGTEGKLNRNRKPEQGTGKRNMMLAETRHTH 172
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 181 GNTARGASSPAKPALHIPDPLSTT 110
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 181 GNTARGASSPAKPALHIPDPLSTT 110
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_48702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 324 DDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETFNTP 476
+ LEK+ TF ++ HP L A L A+R T F +N P
Sbjct: 286 EPLEKLLQETFGENTKMTAVTHPKTLVTAVL---ADRRPATLYFFRNYNMP 333
>SB_42812| Best HMM Match : RVT_1 (HMM E-Value=8.4e-19)
Length = 769
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 341 DLLQIVPVGDDAVFDGVFECEDTPLALCLITYVGVLL 231
D L +PVG DA FDG + DT +C T + ++
Sbjct: 320 DALSRLPVGPDAQFDGKEDSADTD-CICTKTVLATVM 355
>SB_38643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 379 PRSTQSCSPKLPSTPKPT 432
P+S +C+P PS PKP+
Sbjct: 1 PKSLHACAPPKPSVPKPS 18
>SB_9012| Best HMM Match : MobA_MobL (HMM E-Value=0.014)
Length = 125
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 327 DLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETF 467
D E +W+ + E R+ +E LL P NPE +KM M F
Sbjct: 3 DFEILWNKAQFAEKRINSQEAKELLLALPDNPEIT-DKMRLEMTRGF 48
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 102 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 206
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_11543| Best HMM Match : Synaptobrevin (HMM E-Value=0.00034)
Length = 629
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 RKLPRWS*TMGPECAKPVSR-ETTLPAPYFPRSWGDLVTR 210
R++PR S M P A+PVS+ +++P+P P+ G V+R
Sbjct: 296 REVPRLSHQMSP-AAEPVSQLMSSIPSPGMPQGAGHGVSR 334
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,015,102
Number of Sequences: 59808
Number of extensions: 427461
Number of successful extensions: 1270
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1227799733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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