Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A15
(539 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 295 2e-80
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 294 2e-80
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 294 2e-80
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 293 6e-80
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 292 1e-79
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 292 1e-79
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 288 2e-78
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 288 2e-78
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 288 2e-78
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 267 3e-72
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 216 7e-57
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 184 3e-47
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 156 8e-39
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 126 9e-30
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 113 9e-26
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 3e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 82 3e-16
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 75 4e-14
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 74 7e-14
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 36 0.013
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 36 0.013
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,... 32 0.21
At4g24680.1 68417.m03533 expressed protein 31 0.49
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 31 0.65
At2g33280.1 68415.m04079 integral membrane transporter family pr... 30 1.1
At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger) fa... 29 1.5
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.6
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.6
At5g12400.1 68418.m01458 PHD finger transcription factor, putati... 28 4.6
At1g04570.1 68414.m00450 integral membrane transporter family pr... 28 4.6
At1g79350.1 68414.m09247 DNA-binding protein, putative contains ... 27 6.1
At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family... 27 8.0
At3g05750.1 68416.m00646 expressed protein 27 8.0
At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive eff... 27 8.0
At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-... 27 8.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 295 bits (723), Expect = 2e-80
Identities = 135/149 (90%), Positives = 142/149 (95%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
GILTLKYPIEHGIV+NWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFNTPAMYVA QAVLSLYASGRTTGI
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGI 153
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 294 bits (722), Expect = 2e-80
Identities = 135/149 (90%), Positives = 141/149 (94%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
GILTLKYPIEHGIV NWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFNTPAMYVA QAVLSLYASGRTTGI
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGI 153
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 294 bits (722), Expect = 2e-80
Identities = 135/149 (90%), Positives = 141/149 (94%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
GILTLKYPIEHGIV NWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFNTPAMYVA QAVLSLYASGRTTGI
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGI 153
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 293 bits (718), Expect = 6e-80
Identities = 134/149 (89%), Positives = 141/149 (94%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
GILTLKYPIEHGIV+NWDD+EKIWHHTFYNELRVAPEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFN PAMYVA QAVLSLYASGRTTGI
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGI 153
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 292 bits (716), Expect = 1e-79
Identities = 133/149 (89%), Positives = 140/149 (93%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
GILTLKYPIEHGIV NWDD+EKIWHHTFYNELRVAPEEHP+LLTEAPLNP+ANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFN PAMYVA QAVLSLYASGRTTGI
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGI 153
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 292 bits (716), Expect = 1e-79
Identities = 133/149 (89%), Positives = 140/149 (93%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
GILTLKYPIEHGIV NWDD+EKIWHHTFYNELRVAPEEHP+LLTEAPLNP+ANREKMTQ
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFN PAMYVA QAVLSLYASGRTTGI
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGI 153
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 288 bits (706), Expect = 2e-78
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
GILTLKYPIEHG+V+NWDD+EKIWHHTFYNELR+APEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGI 153
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 288 bits (706), Expect = 2e-78
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
GILTLKYPIEHG+V+NWDD+EKIWHHTFYNELR+APEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGI 153
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 288 bits (706), Expect = 2e-78
Identities = 128/149 (85%), Positives = 141/149 (94%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 273 GILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
GILTLKYPIEHG+V+NWDD+EKIWHHTFYNELR+APEEHPVLLTEAPLNP+ANREKMTQ
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFETFN+PAMYVA QAVLSLYASGRTTGI
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGI 153
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 267 bits (655), Expect = 3e-72
Identities = 116/149 (77%), Positives = 137/149 (91%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 272
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 273 GILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQX 452
GIL+LKYPIEHG+V+NWDD+EKIWHHTFYNELR+ PEEHP+LLTEAPLNP+ NREKMTQ
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 453 MFETFNTPAMYVAXQAVLSLYASGRTTGI 539
MFE+F P+MY+ QAVLSLY+SGRTTGI
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGI 154
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 216 bits (528), Expect = 7e-57
Identities = 98/144 (68%), Positives = 117/144 (81%)
Frame = +3
Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 287
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 288 KYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETF 467
K P+EHGIV NWDD+EKIWH+TFYNELRV PEEHPVLLTEAP NP+ANREKMTQ MFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 468 NTPAMYVAXQAVLSLYASGRTTGI 539
+ PAMYV+ Q+VL LY+SGRTTG+
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGV 142
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 184 bits (448), Expect = 3e-47
Identities = 79/107 (73%), Positives = 96/107 (89%)
Frame = +3
Query: 216 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPV 395
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDD+EKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 396 LLTEAPLNPEANREKMTQXMFETFNTPAMYVAXQAVLSLYASGRTTG 536
LLTEAPLNP+A+REKMTQ MFETF P+MY+ QA LSL+ASGRTTG
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTG 107
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 156 bits (379), Expect = 8e-39
Identities = 69/146 (47%), Positives = 97/146 (66%), Gaps = 2/146 (1%)
Frame = +3
Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 281
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 282 TLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFE 461
+ YP+ +GIV NWDD+E +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 462 TFNTPAMYVAXQAVLSLYASGRTTGI 539
+N +++ QAVL+LYA G TG+
Sbjct: 127 KYNFAGVFIQIQAVLTLYAQGLLTGL 152
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 126 bits (304), Expect = 9e-30
Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 22/171 (12%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 242
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 243 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEE 386
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 387 HPVLLTEAPLNPEANREKMTQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
HP+LL E PLN + REK + MFE + PA+++A VL+ +A+GR T +
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSL 175
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 113 bits (271), Expect = 9e-26
Identities = 68/164 (41%), Positives = 94/164 (57%), Gaps = 21/164 (12%)
Frame = +3
Query: 105 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 230
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 231 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLL 401
D Y+GDEA +K R T L YPIEHG V +WD +E+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 402 TEAPLNPEANREKMTQXMFETFNTPAMYVAXQAVLSLYASGRTT 533
TE+PL P +RE + +FETFN P +Y+A +VL+L A+G TT
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLAL-AAGYTT 167
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (250), Expect = 3e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 227
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 228 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLT 404
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 405 EAPLNPEANREK 440
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 81.8 bits (193), Expect = 3e-16
Identities = 57/146 (39%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 105 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 281
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 282 TLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPEANREKMTQXMF 458
TL PIE G++ +WD +E + + Y L E +L T+ P+A RE++ Q MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 459 ETFNTPAMYVAXQAVLSLYASGRTTG 536
ETFN Y + QAVLSLYA GR +G
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISG 138
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 74.5 bits (175), Expect = 4e-14
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Frame = +3
Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 287
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 288 KYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEANREKMTQXMFETF 467
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + + +FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 468 NTPAMYVAX-QAVLSLYASGR 527
++Y+A Q+++ LY + R
Sbjct: 122 GFSSLYIAHPQSLVHLYEASR 142
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 73.7 bits (173), Expect = 7e-14
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Frame = +3
Query: 108 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 287
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 288 -----KYPIEHGIVTNWDDLEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPEANREKMTQ 449
+ P + +V ++ +E I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 450 XMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
+FET+ PA+ A S Y + GI
Sbjct: 138 LLFETYGVPAVAFGVDAAFS-YKYNQLHGI 166
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 36.3 bits (80), Expect = 0.013
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Frame = +3
Query: 351 TFYNELRVAPEEHPVLLTEAPL-------NPEANREKMTQXMFETF---NTPAMYVAXQA 500
T + ++V P P++++ PL + +A+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 501 VLSLYASGRTTGI 539
VL+LYA+ RT+GI
Sbjct: 241 VLALYAARRTSGI 253
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 36.3 bits (80), Expect = 0.013
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Frame = +3
Query: 351 TFYNELRVAPEEHPVLLTEAPL-------NPEANREKMTQXMFETF---NTPAMYVAXQA 500
T + ++V P P++++ PL + +A+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 501 VLSLYASGRTTGI 539
VL+LYA+ RT+GI
Sbjct: 241 VLALYAARRTSGI 253
>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 724
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 100 LPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWSAWVRRTPT 246
LP WS ++ P+C V + AP R+ T+ SW ++ TPT
Sbjct: 396 LPPWSVSILPDCKTEVYNTAKVNAPSVHRNMVPTGTKFSWGSFNEATPT 444
>At4g24680.1 68417.m03533 expressed protein
Length = 1480
Score = 31.1 bits (67), Expect = 0.49
Identities = 28/100 (28%), Positives = 42/100 (42%)
Frame = +2
Query: 200 SSPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRHQLGRFGEDLASHLLQ*AACSS 379
S G + GS L R E TQ P++ +HQ GRFGED A +
Sbjct: 477 SGQGGYDTPGSSVSLER---NESSHSQETQRPYKVLLKHQDGRFGEDNAKR-EEFLGNRL 532
Query: 380 RGAPSLAHRSSPQPRSQQREDDTDXVRDLQHTRHVRSXPG 499
A +A + R+++RE D ++Q + + PG
Sbjct: 533 PNAEKIAQQMQTS-RNERREIRNDASGEVQPVKAELAAPG 571
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.7 bits (66), Expect = 0.65
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -2
Query: 229 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 92
P P + P RG +G T+ +SSPA+P + +P+ +ST + TS+
Sbjct: 290 PTPDIKPT-RGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At2g33280.1 68415.m04079 integral membrane transporter family
protein contains 9 transmembrane domains; contains Pfam
PF03092: BT1 family; contains TIGRFAMS TIGR00788:
folate/biopterin transporter
Length = 408
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = -1
Query: 338 LLQIVPVGDDAVFDGVFECEDTPLALCLITYVGVLLTHADHDALVTRSPHDRGKYGAGSV 159
LLQ + G A+F G E + +A L++ +G +T DALV +YG
Sbjct: 30 LLQGLAWGSLAIFPGAREVLPSLMAFILLSNLGASITEVSQDALV-------AEYGLRYQ 82
Query: 158 VSRETGFAHSGPIVYDQRGNFLVAHCEL 75
++ +A V GN L +C L
Sbjct: 83 INGLQSYALMASAVGGILGNLLGGYCLL 110
>At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 645
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 293 PHRTRHRHQLGRFGEDLASHLLQ*AACSSRGAPSLAHRSSPQPR-SQQREDDTDXVRDLQ 469
P++ H R E+ LL R A SLAH +SP Q D+T V +
Sbjct: 404 PYQNNSLHNQRRLSENFRRSLLSSLVTQQRAARSLAHPASPNEHVLQSGGDNTSQVHNRA 463
Query: 470 HTR 478
+R
Sbjct: 464 SSR 466
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 252 DEAQSKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEAN 431
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 432 REK 440
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 252 DEAQSKRGILTLKYPIEHGIVTNWDDLEKIWHHTFYNELRVAPEEHPVLLTEAPLNPEAN 431
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 432 REK 440
REK
Sbjct: 225 REK 227
>At5g12400.1 68418.m01458 PHD finger transcription factor, putative
similarity to predicted proteins, Arabidopsis thaliana
Length = 1595
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -2
Query: 520 DAYSESTAWXATYMAGVLKVSNXICVIFSLLASGLRGASVSK-TGCSSGATRSSL*KV*C 344
DA+ E+ W + I +F++ LRG S S+ S S L + C
Sbjct: 938 DAWKENCGWCHSCKNSSEDAGTEINCLFNMSLGALRGLSESEVANIQSFEKNSHLLAIIC 997
Query: 343 QIFSKSSQL 317
QI S S+L
Sbjct: 998 QILSLESRL 1006
>At1g04570.1 68414.m00450 integral membrane transporter family
protein contains 8 transmembrane domains; contains Pfam
PF03092: BT1 family; contains TIGRFAMS TIGR00788:
folate/biopterin transporter; similar to hypothetical
protein GB:AAD38263
Length = 542
Score = 27.9 bits (59), Expect = 4.6
Identities = 22/81 (27%), Positives = 35/81 (43%)
Frame = -1
Query: 446 CHLLSVGFGVEGSFGEQDWVLLGSYTQLIVEGVMPDLLQIVPVGDDAVFDGVFECEDTPL 267
C L V + G + ++ G I GV LQ++ G +F G E + +
Sbjct: 130 CSLPMVAKPLYGVLSDVLYIGSGRRVPYIAIGVF---LQVLAWGSMGIFQGAREVLPSLV 186
Query: 266 ALCLITYVGVLLTHADHDALV 204
A L++ +G +T DALV
Sbjct: 187 ACVLLSNLGASITEVAKDALV 207
>At1g79350.1 68414.m09247 DNA-binding protein, putative contains
Pfam PF00628: PHD-finger domain; contains TIGRFAMS
TIGR01053: zinc finger domain, LSD1 subclass; contains
Pfam PF00271: Helicase conserved C-terminal domain;
similar to WSSV086 (GI:19481678)[shrimp white spot
syndrome virus]; similar to nuclear protein Np95
(GI:17939938) [Mus musculus]
Length = 1299
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 413 PQPRSQQREDDTDXVRDLQHTRHVRSXPGRALTVRVRSYHRY 538
P P + + D V++LQ RH S PG ++ RVR ++
Sbjct: 624 PLPEQPEPLSEDDSVKELQRKRHSAS-PGVSIRGRVRKMAKW 664
>At4g25620.1 68417.m03690 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; Common family member At5g52430
[Arabidopsis thaliana];
Length = 449
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 454 CSRPSTHPPCT*LSRPCSHCTRPVVPPV 537
CS PP P +H T+PV PPV
Sbjct: 115 CSLTVNEPPSAFTIGPYAHETQPVTPPV 142
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 93 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 269
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 270 RG--ILTLKYPIEHGIVTNWDDLEK 338
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive
effector-related similar to Endonuclease sen1
(Swiss-Prot:Q92355) [Schizosaccharomyces pombe]; similar
to tRNA-splicing endonuclease positive effector
(Swiss-Prot:Q00416) [Saccharomyces cerevisiae]
Length = 1090
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/58 (22%), Positives = 25/58 (43%)
Frame = +3
Query: 366 LRVAPEEHPVLLTEAPLNPEANREKMTQXMFETFNTPAMYVAXQAVLSLYASGRTTGI 539
L +PE+ P + P P+ + +FN P + A + A+G ++G+
Sbjct: 433 LNPSPEQFPSYEEQTPATPDCFTTSFVDHLHRSFNAPQLAAIHWAAMHT-AAGTSSGV 489
>At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-10)
/ HD-ZIP transcription factor 10 / homeobox protein
(GLABRA2) identical to homeobox protein (GLABRA2)
(homeobox-leucine zipper protein ATHB-10) (HD-ZIP
protein ATHB-10) GB:P46607 [Arabidopsis thaliana]
Length = 747
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 371 TQLIVEGVMPDLLQIVPVGDDAVFDGVFECEDTPLAL 261
TQL++ G P +QI+P G + DGV E PL +
Sbjct: 655 TQLVLAGHDPSNIQILPSGFSIIPDGV---ESRPLVI 688
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,195,876
Number of Sequences: 28952
Number of extensions: 281395
Number of successful extensions: 877
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1003808112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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