Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A14
         (538 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical p...   132   1e-31
Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...   132   1e-31
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...   132   1e-31
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p...    33   0.099
Z29094-15|CAA82341.3|  672|Caenorhabditis elegans Hypothetical p...    29   1.6  
Z93389-7|CAJ43450.2|  201|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z92832-3|CAB07372.1|  333|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF125460-2|AAD12846.1|  151|Caenorhabditis elegans Hypothetical ...    27   8.6  
AF067619-1|AAC17568.2|  368|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical
           protein F17C11.9c protein.
          Length = 365

 Score =  132 bits (320), Expect = 1e-31
 Identities = 60/131 (45%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1   SIPYFWEKFDPEHYSIWYCQYKYPEELAKVS*AVT*SPAV-QRLDRCXXXXXXXXXXXXX 177
           +IP+FWE FD +++SIW C+YKYPE+L     +      + QRL++              
Sbjct: 236 AIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGT 295

Query: 178 XXXXXXXXVWVWRGHELAFPLSPDWQIDYESYEWTKLDPHSPDTKALLRDYFSWTGTDQD 357
                   +WVW+G +LAF LSPDWQ+DYESY WTKLD  S  TK  + +Y  W G D  
Sbjct: 296 DNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFG 354

Query: 358 GRKFNQGKIFK 390
           G+KFNQGKIFK
Sbjct: 355 GKKFNQGKIFK 365


>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score =  132 bits (320), Expect = 1e-31
 Identities = 60/131 (45%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1   SIPYFWEKFDPEHYSIWYCQYKYPEELAKVS*AVT*SPAV-QRLDRCXXXXXXXXXXXXX 177
           +IP+FWE FD +++SIW C+YKYPE+L     +      + QRL++              
Sbjct: 244 AIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGT 303

Query: 178 XXXXXXXXVWVWRGHELAFPLSPDWQIDYESYEWTKLDPHSPDTKALLRDYFSWTGTDQD 357
                   +WVW+G +LAF LSPDWQ+DYESY WTKLD  S  TK  + +Y  W G D  
Sbjct: 304 DNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFG 362

Query: 358 GRKFNQGKIFK 390
           G+KFNQGKIFK
Sbjct: 363 GKKFNQGKIFK 373


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score =  132 bits (320), Expect = 1e-31
 Identities = 60/131 (45%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1   SIPYFWEKFDPEHYSIWYCQYKYPEELAKVS*AVT*SPAV-QRLDRCXXXXXXXXXXXXX 177
           +IP+FWE FD +++SIW C+YKYPE+L     +      + QRL++              
Sbjct: 269 AIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGT 328

Query: 178 XXXXXXXXVWVWRGHELAFPLSPDWQIDYESYEWTKLDPHSPDTKALLRDYFSWTGTDQD 357
                   +WVW+G +LAF LSPDWQ+DYESY WTKLD  S  TK  + +Y  W G D  
Sbjct: 329 DNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFG 387

Query: 358 GRKFNQGKIFK 390
           G+KFNQGKIFK
Sbjct: 388 GKKFNQGKIFK 398


>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
            protein K07E12.1b protein.
          Length = 12268

 Score = 33.5 bits (73), Expect = 0.099
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 235  PLSPDWQIDYESYEWTKL 288
            PL PD Q+D+++YEW KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689


>Z29094-15|CAA82341.3|  672|Caenorhabditis elegans Hypothetical
           protein C07A9.11 protein.
          Length = 672

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -3

Query: 134 LSRRWTAG---DQVTAHDTLASSSGYLYWQYQME*CSGSNFSQ 15
           L++ WT     D V  +D      GYL W   +E C+ S FS+
Sbjct: 46  LNKTWTQEQVCDYVNCNDNACEGGGYLLWTQYVE-CASSTFSR 87


>Z93389-7|CAJ43450.2|  201|Caenorhabditis elegans Hypothetical
           protein T13F3.9 protein.
          Length = 201

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 418 SHLTHLTYKSKPCLIYI 468
           SHL  LT K +PCL YI
Sbjct: 65  SHLKSLTTKIRPCLFYI 81


>Z92832-3|CAB07372.1|  333|Caenorhabditis elegans Hypothetical
           protein F31D4.4 protein.
          Length = 333

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 202 VWVWRGHELAFPLSPDWQIDYESYEW-TKLDPHSPDTKALLRDYFSWTGTDQD 357
           +  W   E    +SP+W   YE+ E+ T +    P T+ L+  YF    T+ +
Sbjct: 152 ITTWHRDEEGTIVSPNWPNSYENLEYDTHIIKSEPGTRILM--YFEEVDTEHN 202


>Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical
           protein F35E2.7 protein.
          Length = 633

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 16  WEKFDPEHYSIWYCQYKYPEELA 84
           W   D EH ++ YC+Y+ P  LA
Sbjct: 418 WNIHDIEHLNVPYCKYETPGPLA 440


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 145 CLRICRGAGQPVIRL 101
           C R+CRGAG+P I L
Sbjct: 94  CERVCRGAGEPPILL 108


>AF125460-2|AAD12846.1|  151|Caenorhabditis elegans Hypothetical
           protein Y9D1A.2 protein.
          Length = 151

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 256 IDYESYEWTKLDPHSPDTKALLRDYFSWTGTDQDG 360
           +D++   W  +D        + RD   W GTD+DG
Sbjct: 1   MDWDGSGWIGMDRDGSGWIGMDRDGSGWIGTDRDG 35


>AF067619-1|AAC17568.2|  368|Caenorhabditis elegans Hypothetical
           protein K03E5.3 protein.
          Length = 368

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 100 QLMTLWPAPPGTCTGSTRWSSARDQTS 20
           +++TLW  PP    GS R+S++ D  S
Sbjct: 205 EVVTLWYRPPEILLGSQRYSTSLDMWS 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,361,976
Number of Sequences: 27780
Number of extensions: 187255
Number of successful extensions: 552
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)