Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A08
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   2.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.4  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = -2

Query: 165 LLIGVSNLVLKLLIFHGGLHVEAVRLESILRLNSVL-----LFFIFSPVLLGLIDHT 10
           L I  S ++L   I+H  +H+   +L S  +  ++L     + FI +  + G + H+
Sbjct: 45  LNITASAVLLPFAIYHIFMHIVPTKLISFYKSTAILEIAFEVIFIVTVWMTGAVKHS 101


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 90  LESILRLNSVLLFFIFSPVLLGLI 19
           L  +  L S+L+FFIF   +L ++
Sbjct: 233 LPCVFFLGSILIFFIFPLAILIIV 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,158
Number of Sequences: 336
Number of extensions: 1546
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)