Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A08
(481 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 124 9e-30
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 120 2e-28
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 86 2e-18
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 46 3e-06
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.039
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 31 0.068
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 29 0.28
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 29 0.36
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 29 0.36
SPBC25H2.08c |mrs2||magnesium ion transporter Mrs2|Schizosacchar... 28 0.84
SPBC19F8.02 |||nuclear distribution protein NUDC |Schizosaccharo... 27 1.5
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 27 1.9
SPBC1685.06 |cid11||poly|Schizosaccharomyces pombe|chr 2|||Manual 26 2.6
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 3.4
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 26 3.4
SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subun... 25 5.9
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 25 5.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 25 5.9
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 5.9
SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces po... 25 7.8
SPAC1B2.04 |cox6||cytochrome c oxidase subunit VI|Schizosaccharo... 25 7.8
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 25 7.8
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 25 7.8
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 7.8
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 124 bits (298), Expect = 9e-30
Identities = 55/99 (55%), Positives = 75/99 (75%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDK 180
EI+RMV+EAEKY+ EDE + IQ+KN LESY ++++++++D LKDK+ SDK+ I
Sbjct: 512 EIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKA 571
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 297
+TI+WLD N A K+EYE KQKELEGV NPI+ K+YQ
Sbjct: 572 VKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 120 bits (288), Expect = 2e-28
Identities = 53/99 (53%), Positives = 74/99 (74%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDK 180
EI+RMV EAEKY+ EDE + IQ+KN LESY ++++++++D LKDK+ SDK+ +
Sbjct: 512 EIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKA 571
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 297
+TI+WLDSN A K+E+E KQKELE V NPI+ K+YQ
Sbjct: 572 VKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 86.2 bits (204), Expect = 2e-18
Identities = 40/100 (40%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTM-EDEKLKDKITDSDKQIIMD 177
+IERMV EAE++ ED+ K+ I+++N LE+Y +++K +DE+L K+ DKQ ++D
Sbjct: 542 DIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLD 601
Query: 178 KCNDTIKWLD-SNQLADKEEYEHKQKELEGVCNPIITKLY 294
D +WL+ + A KEE+E ++++L+ V +PI KLY
Sbjct: 602 AVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 46.0 bits (104), Expect = 3e-06
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTME--DEKLKDKITDSDKQIIM 174
EIE MV +AEKYR D +K+ I++ N ES C +++S ++ +KL + + + I
Sbjct: 554 EIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKIT 613
Query: 175 DKCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 297
D K ++ E+ + K E++ + + +Y+
Sbjct: 614 DLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYK 654
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 32.3 bits (70), Expect = 0.039
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
Frame = +2
Query: 62 TLFNRRMLSSRTAST*SPPWKMRSLRTRLLTPISKSSWTSATTPSNGSTRISWLIRKSMS 241
TL + M SS + S+ SP ++ + +P S SS++S T+ S S+ S + S S
Sbjct: 320 TLSSSSMSSSSSFSS-SPTSSSSTISSSSSSP-SSSSFSSTTSSSKSSSSFSSTVSSSSS 377
Query: 242 TSRRNWRVFATRSSRSCTRXXXXXXXXXXXXXXGSLAEH-PVREAQRPAEVPDPPSRRST 418
TS ++ SSR + S + PV A S S+
Sbjct: 378 TSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSS 437
Query: 419 KHS 427
HS
Sbjct: 438 SHS 440
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 31.5 bits (68), Expect = 0.068
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = +1
Query: 16 VNEAEKYRTEDEKQK---DTIQSKNALESYCFNMK---STMEDEKLKDKITDSD-KQIIM 174
+NE +K+ E++ + Q+ ++ N+ +E + K TD+D KQ++
Sbjct: 224 INEVKKFEDEEDTSTPNTSSFQNNSSSLDLSDNLSYLLQYLEGNRSKINATDADVKQLLS 283
Query: 175 DKCNDTIKWLDSNQLADKEEYEHKQK 252
D + KW + ++ +E YE +K
Sbjct: 284 DVKKNKSKWANDQRIGQEELYEAAEK 309
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 29.5 bits (63), Expect = 0.28
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQ-KDTIQSKNALESYCFNMKSTMED--EKLKDKITDSDKQII 171
E+ EAE +K +T+ KNALE Y ++ ++ ++D ++ S + +
Sbjct: 554 EVLEKYREAEHQMIATDKLVAETVDRKNALEEYIYDTRAKLDDIYAPFTNEEESSKFKEM 613
Query: 172 MDKCNDTIKWL-DSNQLADKEEYEHKQKELEGVCNPI 279
+ K D WL + + K Y K ++L V PI
Sbjct: 614 LTKAED---WLYEEGEDTTKAVYTAKLEDLMRVGGPI 647
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 29.1 bits (62), Expect = 0.36
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Frame = +1
Query: 16 VNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKC---- 183
+NE + Y + Q DT S L S C N S L + D + ++ C
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELS--GKNVLFFYFLEDDSEKLLKACQHFI 887
Query: 184 --NDTIKWLDSNQLADK 228
D+IK L N+ DK
Sbjct: 888 CVKDSIKRLGDNKFEDK 904
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 29.1 bits (62), Expect = 0.36
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = +1
Query: 19 NEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCNDTIK 198
+EA K T +EKQ + S N + K +E D + ++DK+ D + +
Sbjct: 47 SEAAKITT-NEKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVEENEE 105
Query: 199 WLDSNQLADKEEYEHKQKE 255
D+N+ +++E + ++ E
Sbjct: 106 EADANEEEEEDEEDDEEDE 124
>SPBC25H2.08c |mrs2||magnesium ion transporter
Mrs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 27.9 bits (59), Expect = 0.84
Identities = 9/37 (24%), Positives = 25/37 (67%)
Frame = -2
Query: 153 VSNLVLKLLIFHGGLHVEAVRLESILRLNSVLLFFIF 43
++++V +L+ G + + + + ++++ NSVLLF ++
Sbjct: 121 INSIVPVILVREGSILINLLHIRALIKANSVLLFDVY 157
>SPBC19F8.02 |||nuclear distribution protein NUDC
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 27.1 bits (57), Expect = 1.5
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +1
Query: 4 IERMVNEAEKYRTEDEKQKDTIQS 75
+E+M+ E + RT+++K+KD +Q+
Sbjct: 126 VEKMMLEQSQKRTDEQKRKDVLQN 149
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 26.6 bits (56), Expect = 1.9
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 53 NRRTLFNRRMLSSRTAST*SPPWKMRSLRTRLLTPISKSSWTSATTPSNGST 208
N T ++ R+ +S T S K S+ T LT IS S ++T P+NG+T
Sbjct: 171 NITTPYSNRITNSNT-SVNDITSKYLSVGTITLTTISGSDLYTSTFPANGTT 221
>SPBC1685.06 |cid11||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 478
Score = 26.2 bits (55), Expect = 2.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 274 GCKHPPVPSACAHTLPYQP 218
GC H +P A A+ PY P
Sbjct: 386 GCNHTVLPEAAAYPKPYYP 404
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 25.8 bits (54), Expect = 3.4
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 ERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKC- 183
E ++EK +++K KNA ++ +M DE+ + S K+ K
Sbjct: 100 EEEEEDSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSK 159
Query: 184 NDTIKWLDSNQLADKEEYEHKQKE 255
+D + LD + E+ + K+K+
Sbjct: 160 DDGSEALDDGDIESSEKDKKKKKK 183
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 25.8 bits (54), Expect = 3.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 13 MVNEAEKYRTEDEKQKD-TIQSK-NALESYCFNMKSTMEDEKLKDKI 147
+V E Y + +K+ T +SK + L YC KS M + L+ +I
Sbjct: 958 LVEENAPYENDSVSEKEGTYKSKVDDLPFYCIGFKSAMPEYTLRTRI 1004
>SPAC3A12.07 |rpb11||DNA-directed RNA polymerase II complex subunit
Rpb11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 123
Score = 25.0 bits (52), Expect = 5.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 154 SDKQIIMDKCNDTIKWLDSNQLADKEEYEHKQKELEGV 267
S KQ+I+D I L+ ++ E+E K +EGV
Sbjct: 81 SPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGV 118
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.0 bits (52), Expect = 5.9
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 136 KDKITDSDKQIIMD-KCNDTIKWLDSNQLADKEEYEHKQKELE 261
++KI +++ I D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 5.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYC 99
E +++ E ++ EDEKQ + + K AL+ +C
Sbjct: 302 EQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFC 334
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.0 bits (52), Expect = 5.9
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQI 168
E+E +NE + E E+Q S+N ++ +K +E EKLK+ + D ++
Sbjct: 1609 ELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFDVKL 1663
>SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 24.6 bits (51), Expect = 7.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 7 ERMVNEAEKYRTEDEKQKD 63
++ E EKYR E+EK+K+
Sbjct: 301 KKQSKELEKYRQEEEKRKE 319
>SPAC1B2.04 |cox6||cytochrome c oxidase subunit
VI|Schizosaccharomyces pombe|chr 1|||Manual
Length = 140
Score = 24.6 bits (51), Expect = 7.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 214 QLADKEEYEHKQKELEGVCNPI 279
+L KE+Y+ KEL+ VCN +
Sbjct: 109 KLPTKEQYQAYVKELKPVCNEL 130
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 128 RSLRTRLLTPISKSSWTSATTPSN 199
RSL ++ TP S+ +WT+ TPS+
Sbjct: 297 RSLNSK--TPKSQDNWTTQVTPSS 318
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 24.6 bits (51), Expect = 7.8
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +1
Query: 19 NEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEK--LKDKITDSDKQIIMDKCNDT 192
+EAEK +E+E+ + ++ ++ + S K+ + +K K K+T N+
Sbjct: 67 SEAEKSVSEEEQDEPLVEGESPIVSTNKKAKNKKKKKKQQKKKKVTGKRDLDNQSSDNEK 126
Query: 193 IKWLDSNQLADK--EEYEHKQKELE 261
++ L+S++ D +E E EL+
Sbjct: 127 LEGLESSKNIDDDIDEIEKAAAELK 151
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 24.6 bits (51), Expect = 7.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 22 EAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKI 147
E K + EK K K L YC KST + L+ +I
Sbjct: 877 EETKSDVKSEKGKKQGTVKEDLPFYCIGFKSTAPEYTLRTRI 918
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,573,377
Number of Sequences: 5004
Number of extensions: 24909
Number of successful extensions: 270
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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