Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A08
(481 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 157 4e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 2e-33
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 113 7e-26
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 81 4e-16
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 39 0.002
SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6) 36 0.023
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.030
SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007) 33 0.12
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 33 0.16
SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.21
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_18205| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.37
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 31 0.65
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 30 0.86
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.86
SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 29 1.5
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 29 1.5
SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5) 29 1.5
SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01) 29 1.5
SB_39087| Best HMM Match : ATP-synt_DE_N (HMM E-Value=4.1) 29 2.0
SB_59799| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-09) 29 2.6
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2) 29 2.6
SB_53016| Best HMM Match : eRF1_1 (HMM E-Value=4.9) 28 3.5
SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 28 3.5
SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8) 28 3.5
SB_45902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6) 28 4.6
SB_24622| Best HMM Match : F5_F8_type_C (HMM E-Value=7.4e-17) 28 4.6
SB_23579| Best HMM Match : PspA_IM30 (HMM E-Value=1.5) 28 4.6
SB_34276| Best HMM Match : CsbD (HMM E-Value=1.5) 28 4.6
SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11) 27 6.1
SB_40103| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 27 8.0
SB_31307| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.0
SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) 27 8.0
SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 157 bits (381), Expect = 4e-39
Identities = 67/99 (67%), Positives = 88/99 (88%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDK 180
+IERMVNEA KY+ EDEKQ+D IQ+KN+LESY ++MKST+ED+K+KDKI++ DK+ I+DK
Sbjct: 516 DIERMVNEASKYKEEDEKQRDRIQTKNSLESYAYSMKSTVEDDKVKDKISEEDKKAILDK 575
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 297
C + +KWLD+NQ A+K+E+E+ QKELE VCNPIITKLYQ
Sbjct: 576 CTEVLKWLDTNQTAEKDEFEYHQKELEKVCNPIITKLYQ 614
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 138 bits (334), Expect = 2e-33
Identities = 60/99 (60%), Positives = 81/99 (81%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDK 180
+IERMV EAEK++ DE ++ IQSKN+LESY F+MKSTMEDEK+KDK+++ +++ ++ +
Sbjct: 608 DIERMVKEAEKFKAADEAVRERIQSKNSLESYAFSMKSTMEDEKVKDKLSEDEREKVISR 667
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 297
C T+ WL+ NQ A+KEE + QKELEGVCNPIITKLYQ
Sbjct: 668 CKATLDWLEHNQSAEKEEIDAHQKELEGVCNPIITKLYQ 706
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 113 bits (272), Expect = 7e-26
Identities = 45/98 (45%), Positives = 74/98 (75%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDK 180
EI+RM+N+AEKY++EDE Q++ I ++N LESY F +KS + + L+ K++ SDK + +K
Sbjct: 515 EIDRMINDAEKYKSEDEAQREKIAARNRLESYAFGVKSAISEPSLEGKLSQSDKDTVKNK 574
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLY 294
+ + WL+ N LA+KEE+E ++KEL+ VC+PI+ K++
Sbjct: 575 VEEVLNWLEKNSLAEKEEFEEQEKELQRVCSPIMAKVH 612
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 81.4 bits (192), Expect = 4e-16
Identities = 35/93 (37%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMED-EKLKDKITDSDKQIIMD 177
+IERMVN+AEK+ ED+K K+ ++++N LESY +++K+ + D EKL K+++ DK+ I +
Sbjct: 1209 DIERMVNDAEKFADEDKKTKEKVEARNELESYAYSLKNQVGDKEKLGGKLSEDDKKTITE 1268
Query: 178 KCNDTIKWLDSNQLADKEEYEHKQKELEGVCNP 276
I W+D NQ A E+++ ++++ + + +P
Sbjct: 1269 AVEKAISWMDKNQDASVEDFKKEKRKWKMLYSP 1301
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 39.1 bits (87), Expect = 0.002
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +1
Query: 7 ERMVNEAEKYRTED-EKQKDTIQSKNALESYCFNMKSTMED-EKLKDKITDSDKQIIMDK 180
ER A +Y D + D +++ L++ + K T+ D +K + T D+
Sbjct: 712 ERAREAATRYNKVDCIEYLDKAEAQFELKALITSTKETIADPDKHMGRFTKDDRVSGNRY 771
Query: 181 CNDTIKWLDSN-QLADKEEYEHKQKELEGVCNPIITKL 291
C++ +WL++N A EE ++++L GV PI++KL
Sbjct: 772 CDEKSEWLENNADTASLEEIVKQKEDLAGVLQPILSKL 809
>SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6)
Length = 256
Score = 35.5 bits (78), Expect = 0.023
Identities = 23/89 (25%), Positives = 44/89 (49%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDK 180
E+E+ E EK R E EKQ+ + K LES ++ + + +K + ++ +++K
Sbjct: 107 EVEKERQEEEKRRMEIEKQRMESEKKRILESKQKRIEESKDTIHDNEKFLEEQRKRLVEK 166
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKELEGV 267
+ + + L D+ + E +Q EGV
Sbjct: 167 VKN--EGEEERMLHDQRQKEEEQWRKEGV 193
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 35.1 bits (77), Expect = 0.030
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +1
Query: 28 EKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLD 207
E + D+ + ++KNALES+ F ++ M E + T+++++ I + WLD
Sbjct: 704 EAPKARDDAKAANERAKNALESHIFGVRDEMNSELGEKLSTEAERETISEALTAASDWLD 763
Query: 208 SN 213
+
Sbjct: 764 ED 765
>SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007)
Length = 881
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/86 (24%), Positives = 43/86 (50%)
Frame = +1
Query: 4 IERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKC 183
I R + + + +++ D+KQ I N L++ + K +++EK KIT ++
Sbjct: 585 ISRNIMQFDIHKSSDQKQTKAIAPLNVLDALHMHPKPNLKEEKPPQKITSEEQ------- 637
Query: 184 NDTIKWLDSNQLADKEEYEHKQKELE 261
K + N+ +EE E K+++L+
Sbjct: 638 ----KQKERNRQKHREEMERKREKLQ 659
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 32.7 bits (71), Expect = 0.16
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +1
Query: 1 EIERMVNEAEKY--RTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIM 174
EIER NE ++ ED+ + +T + K+A E+ + +++D+K + +K I
Sbjct: 1352 EIERWKNEYKRRIDGLEDQLEAETRKMKHAEEALLLEREKSIQDKKNGLAEFEKEKVAIY 1411
Query: 175 DKCNDTIKWLDSNQLADKEEYEHKQKEL 258
+ ND I ++S + +Y+ K L
Sbjct: 1412 QRFNDRIAAVESERDILVSDYQKKISSL 1439
>SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 58
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 181 CNDTIKWLDSN-QLADKEEYEHKQKELEGVCNPIITKL 291
C++ +WL++N A EE ++++L GV PI++KL
Sbjct: 7 CDEKSEWLENNADTASLEEIVKQKEDLAGVLQPILSKL 44
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +1
Query: 121 EDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLADKEEYEHKQKELE 261
E E +K+ + +++++I KC +T K LD+++ D+E+ E Q+E E
Sbjct: 1077 EHETMKESLLNANREIGRLKCENTAKNLDADRKEDQED-EEVQREGE 1122
Score = 30.3 bits (65), Expect = 0.86
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 13 MVNEAEKYRTE--DEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQII--MDK 180
+VN + +E DEK K ++K L+ + + K DS K+++ + +
Sbjct: 1640 LVNSLHEKMSEMNDEKDKLDDENKQLLDEKSREVTDLKGEVKKAQDDADSVKRLVDAIIE 1699
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKEL 258
NDT+K + + LA +E+ EH EL
Sbjct: 1700 ENDTLKQSEHDLLAIQEDLEHTIDEL 1725
Score = 30.3 bits (65), Expect = 0.86
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFN-MKSTMEDEKLKDKITDSDKQIIMD 177
EIE M + K E EK I SKN+ S N + S +E+ ++ ++DSD + +
Sbjct: 1946 EIEEMREKMRKANEEIEK----ILSKNSKLSDILNELNSGIENILNEETLSDSDPNVKLQ 2001
Query: 178 KCNDTIKWLDSNQLADKEEYEHKQKE 255
K + + L+ KEE E +E
Sbjct: 2002 KLREKFENLEKQVNNVKEEAEKNVQE 2027
>SB_18205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 31.5 bits (68), Expect = 0.37
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 80 MLSSRTAST*SPPWKMRSLRTRLLTPISKSSWTS---ATTPSNGSTRISWLIRKSMSTS 247
+L S T T + P R+ R T IS WTS +G+ RISWL R + STS
Sbjct: 32 VLCSTTTPTSNDPRTTRTPRMHGTTRISWMPWTSRMYGPYGPDGTPRISWLPRITRSTS 90
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 59 RTLFNRRMLSSRTAST*SPPWKMRSLRTRLLTPISKSSWTSATTPSNGSTRISWL 223
RT + +L T T +P + T TP S T+ T +G+TRISW+
Sbjct: 10 RTSVHSYVLHGTTTPTPTPTSDVLCSTT---TPTSNDPRTTRTPRMHGTTRISWM 61
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 30.7 bits (66), Expect = 0.65
Identities = 21/85 (24%), Positives = 43/85 (50%)
Frame = +1
Query: 7 ERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCN 186
E+ E +K +K+K+ + ++ L + E K++ + + DKQ+ +K
Sbjct: 960 EKEEKEKQKEAERAKKEKERLLQEDKLHEKEEKDRKDKEKRKVEKEKREKDKQVEKEK-K 1018
Query: 187 DTIKWLDSNQLADKEEYEHKQKELE 261
D++K + + +DKE + K+KE E
Sbjct: 1019 DSLKRVKKRKDSDKER-KVKEKEEE 1042
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 30.7 bits (66), Expect = 0.65
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Frame = +1
Query: 109 KSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSN------QLADK-EEYEHKQKELEGV 267
K ++ +K + D +K++ ++C TIK LDSN Q+AD+ EE + ++ELE V
Sbjct: 176 KLVVDLQKTRKAQDDCEKEV--NRCEATIKTLDSNLKDLRQQVADRDEELNNNRQELESV 233
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Frame = +1
Query: 49 EKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKC----NDTIKWL--DS 210
+ K+ +Q + L ++ K +E EK+ + TD K + ++K + I+ L +
Sbjct: 296 QMNKERLQIERKLANFTKTSKKEVESEKVISR-TDGKKVLELEKDISKKKNEIRRLRTEL 354
Query: 211 NQLADKEEYEHKQKELEG 264
+QL + +++H +KELEG
Sbjct: 355 SQLQENSKHKHFEKELEG 372
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/99 (21%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Frame = +1
Query: 7 ERMVNEAEKYRTEDEKQKDTIQSK-NALESYCFNMKS-----TMEDEKLKDKITDSDKQI 168
+R + E ++ ++ E++ ++ K L+ N+K+ T+E ++L+D +TD+ Q+
Sbjct: 2891 KRNIQELQRNVSKLEEENAVLEEKVKLLDEASSNLKNQTEVQTVELKRLRDSLTDAKNQL 2950
Query: 169 IMDKCNDTIKWLDSNQLADKEEYEHKQ-KELEGVCNPII 282
N + +L ++ + +Q K+L+ CN ++
Sbjct: 2951 TTSNNNYEGSERERKRLMEELIHSEEQVKKLQDTCNELL 2989
>SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 1007
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +1
Query: 7 ERMVNEAEKYRTEDEKQKDTIQSK--NALESYC-FNMKS-TMEDEKLKDKITDSDKQIIM 174
E M N+A K R E E++KD + + S F +K+ +E EK+ +K+ ++ +
Sbjct: 945 ENMANDANKLREERERKKDAAAADGGGVVSSVAVFTLKAKVIELEKMVEKLKKENEHLER 1004
Query: 175 DK 180
DK
Sbjct: 1005 DK 1006
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMD 177
E+E+ E EK T +K+KD ++ N +++ DE K+ D+ Q I+D
Sbjct: 839 ELEKAKGEIEKAWTLYDKEKDRLEKLNGQLIDELKSLTSVLDEMKKESENDAQCQKILD 897
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 10 RMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMED-EKLKDKITDSDKQIIMDKCN 186
R EAE+ R E EK+K + +K ED E+LK++ D +++ K
Sbjct: 190 RFEQEAERRRREAEKRKAEEEEARRKADELEKIKRQQEDEERLKNQRLDEERK----KLE 245
Query: 187 DTIKWLDSNQLADKEEYEHKQKELE 261
+ L + KEE E K++E E
Sbjct: 246 EEEANLMEEERKRKEEAEKKREEEE 270
>SB_31962| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 205
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/87 (20%), Positives = 41/87 (47%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDK 180
E E E E+ +TE+E+++ + + E + E+EK + K D +++++ D+
Sbjct: 72 EEEEEQTEEEEEQTEEEEEQTEEEEEQTEEEEEQTEEEEEEEEKEEGKEEDGEEEVVTDE 131
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKELE 261
+ +SN+ + E + + E
Sbjct: 132 RGISSSKDESNESDESNESDESNESDE 158
>SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01)
Length = 317
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDK 180
E+E+ E EK R E EKQ+ + K LES ++ + + +K + ++ +++K
Sbjct: 225 EVEKERQEEEKRRMEIEKQRMESEKKRILESKQKRIEESKDTIHDNEKFLEEQRKRLVEK 284
>SB_39087| Best HMM Match : ATP-synt_DE_N (HMM E-Value=4.1)
Length = 171
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = -1
Query: 277 SGCKHPPVPSAC---AHTLPYQPADS 209
SG K+PP+PS C HT P PA +
Sbjct: 8 SGGKYPPLPSVCPPKTHTTPTAPAST 33
>SB_59799| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-09)
Length = 323
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = -2
Query: 192 GVVALVHDDLLIGVSNLVLKLLI---FH-GGLHVEAVRLESILRLNSVLLFFIFSPVLLG 25
G+VAL+ ++I + +KL H G +H ++ L + +++ +F FSP+L+G
Sbjct: 172 GIVALM--SIMISYLVIWIKLTFPDNLHIGRVHQTTAKMTQTLFIVTLVSYFCFSPILIG 229
Query: 24 LI 19
+I
Sbjct: 230 II 231
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 106 MKSTMEDEKLKDKITDSDKQIIMDKCNDTIKW-LDSNQLADKEEYEHKQKELEGVCNPII 282
+++ + EK K + D ++++ + T+K+ LD +LA KE++ +KE EG +
Sbjct: 100 VENDRDSEKHKRDLRDKEQEL--SELRKTVKYALDQEKLA-KEQFGDLKKEFEGYKKKMD 156
Query: 283 TKL 291
TK+
Sbjct: 157 TKM 159
>SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2)
Length = 252
Score = 28.7 bits (61), Expect = 2.6
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Frame = +1
Query: 40 TEDEKQKDTIQSKNALESYCFNMKSTMEDEK-----------LKDKITDSDKQIIMDKCN 186
TEDE+ + Q + S N S+ +DE KD I+ S + I C+
Sbjct: 16 TEDERLNEVSQEETTKSSTKLNSDSSAKDENDVNEGDTGCLAAKDPIS-SQQDEIKGNCD 74
Query: 187 DTIKWLDSNQLADKEEYEHKQKE 255
D +K+ ++ + +D E E + KE
Sbjct: 75 DKVKFSENTEKSDNET-EQQNKE 96
>SB_53016| Best HMM Match : eRF1_1 (HMM E-Value=4.9)
Length = 813
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDE--KLKDKITDSDKQIIM 174
E E +E + +DE + D + K+ E ++K ED+ LKD+ D +
Sbjct: 504 ESEDDESEDDLVHLKDESEDDLVHLKDESEDGLVHLKDESEDDLVHLKDESEDDLVHLKD 563
Query: 175 DKCNDTIKWLDSNQLADKEE 234
+ +D + D L D+ E
Sbjct: 564 ESEDDLVHLKDEMHLKDESE 583
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 19 NEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDE--KLKDKITDSDKQIIMDKCNDT 192
+E + +DE + D + K+ E ++K ED+ LKD+ D + + +D
Sbjct: 371 SEDDLVHLKDESEDDLVHLKDESEDGLVHLKDESEDDLVHLKDESEDDLVHLKDESEDDL 430
Query: 193 IKWLDSNQLAD 225
+ D N+ D
Sbjct: 431 VHLKDENESED 441
>SB_47024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/87 (22%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 7 ERMVNEAEKYRTED-EKQKDTIQSKNALESYCFNMKSTMEDEKLKDKIT-DSDKQIIMDK 180
E++ E E+Y T +QK+ + K + + N+KS E+ K K+K++ + K++
Sbjct: 123 EQLQLERERYATASLTQQKEALSEKLSQITLRQNLKSHKEEAKNKEKLSKERQKKLENML 182
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKELE 261
++ + ++ +L +++ K+ E E
Sbjct: 183 QSERQRCVEYQRLYEEQVLRQKEMERE 209
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 22 EAEKYRTED-EKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCNDTIK 198
E ++ R +D +K++D + + + + +K +D+ D DK+ D+ D K
Sbjct: 365 EKDRERDKDRDKERDRDKDREREKDRDKERDRDKDRDKERDRDKDRDKERDRDRDRDRDK 424
Query: 199 WLDSNQLADKEEYEHKQK 252
D ++ D++ + K+K
Sbjct: 425 ERDKDRHRDRDRRDRKEK 442
Score = 27.5 bits (58), Expect = 6.1
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +1
Query: 7 ERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCN 186
ER E +K R +K KD + + + + +K +DK D DK+ +K
Sbjct: 312 ERREKEEKKSR---DKDKDRERERKDKKDRDRGRNKDRDRDKERDKDRDRDKERDREKDR 368
Query: 187 DTIKWLDSNQLADKEEYEHKQKELE 261
+ K D + DK+ K ++ E
Sbjct: 369 ERDKDRDKERDRDKDREREKDRDKE 393
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 28.3 bits (60), Expect = 3.5
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTME---DEKLK---DKITDSDK 162
E ER+ EAE+ R EDE+Q+ + + A E +K M+ DE+ + D+I ++
Sbjct: 419 EEERLRVEAERQREEDERQRAEDERQRA-EDERQRVKHEMQRLKDERRRAEEDEIARQEE 477
Query: 163 QI--IMDKCNDTIKWLDSNQLADKEEYEHKQKELE 261
++ + ++ +K Q+A++E+ + +E E
Sbjct: 478 ELRRLQEQREKELKRYKELQMAEEEKRRKETEERE 512
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +1
Query: 4 IERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLK-DKITDSDKQIIMDK 180
I R EAE+ R E E+++ + +ALE C + + ++K K+ + +++ +
Sbjct: 522 IRREREEAERLRREKEQREQLVPHSDALE--CAIKPLNLLEARIKAQKLEEEQRELERLQ 579
Query: 181 CNDTIK-WLDSNQLADKEEYEHKQKELE 261
+K + +L +K + E Q+E E
Sbjct: 580 AEAELKRKQELERLREKRKEEKAQRERE 607
>SB_54255| Best HMM Match : DUF329 (HMM E-Value=7.8)
Length = 82
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 109 KSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLADKEEYEHKQKEL 258
K T ED++ + K +SD Q + N T K +L + +E K+ EL
Sbjct: 33 KVTQEDQEPEKKSNESDPQKDQETDNKTSKKESQEELREADETPKKKDEL 82
>SB_45902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 41 LKMKNRRTLFNRRMLSSRTAST*SPPWKMRSLRTRLLTPISKSSWTSA 184
L + NR T +R S T ST P +RT P+ S WT +
Sbjct: 30 LPLDNRHTALGQRGPFSGTLSTPGHPIYRYLIRTHPFPPLGPSGWTDS 77
>SB_39966| Best HMM Match : CRA_rpt (HMM E-Value=8.6)
Length = 159
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDK 180
E E+ + K +TE E++K Q + E+ T E E K+K ++K+ K
Sbjct: 30 ETEKEEEKETKKKTEKEEEKWK-QEETEKEAETEKEAET-EKEAEKEKKKKTEKEEEKGK 87
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKE 255
+T K ++ + A+ E+ E +KE
Sbjct: 88 QEETGKEAETEKQAETEKQEETEKE 112
>SB_24622| Best HMM Match : F5_F8_type_C (HMM E-Value=7.4e-17)
Length = 897
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 13 MVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDK 162
++ E ++ R ++EK+ +Q++ +E C + EKLK +I K
Sbjct: 341 LLAEVKRLRPKNEKEVQFLQTEAEIEIQCIENTAEYIKEKLKSEIEKEGK 390
>SB_23579| Best HMM Match : PspA_IM30 (HMM E-Value=1.5)
Length = 207
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/94 (21%), Positives = 41/94 (43%)
Frame = +1
Query: 1 EIERMVNEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDK 180
+I +MVN + +D + + + ++ K M+ L D++ +K + MD+
Sbjct: 23 KIVQMVNNTARVTRKDARDTEA----SCVDVSLSVRKKNMDILHLNDEVKRYEKLLAMDR 78
Query: 181 CNDTIKWLDSNQLADKEEYEHKQKELEGVCNPII 282
L+ + E EHK +ELE + ++
Sbjct: 79 KLPRRSILEERLGRAEAELEHKDRELENLHKQVV 112
>SB_34276| Best HMM Match : CsbD (HMM E-Value=1.5)
Length = 119
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 133 LKDKITDSDKQIIMDKCNDTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 297
L D++ SD+ + D+ W DS A + K+K L N +I ++ Q
Sbjct: 9 LLDELMGSDRDLAPDQKGKRAHWSDSEDGAQNKPDNEKEKMLTEKINSLIDQVEQ 63
>SB_23038| Best HMM Match : EGF_2 (HMM E-Value=2.8e-11)
Length = 1477
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/76 (18%), Positives = 30/76 (39%)
Frame = +1
Query: 28 EKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCNDTIKWLD 207
E++ T K AL+ F + + +K K + ++ D + + W D
Sbjct: 118 EEFLTGTRTLKSMHNKAGALDCSKFEYEYNSKGRPVKIKTLEGSREFKYDAMSQLVAWRD 177
Query: 208 SNQLADKEEYEHKQKE 255
S + + EY + ++
Sbjct: 178 SGEGGNGSEYSYDSRK 193
>SB_40103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 113 PPWKMRSLRTRLLTPISKSSWTSATTPSNGSTRI 214
P ++ LR L PIS T TPS ST I
Sbjct: 40 PALRLAPLRPALTAPISSGITTGTATPSVNSTNI 73
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 112 STMEDEKLKDKITDSDKQIIMDKCNDTIKWLDSNQLADKEEYEHKQ 249
ST +E DKI + + +KC T K + ++++ K + E K+
Sbjct: 521 STFNEEVTVDKIGPEQQVGVKEKCRKTKKRVTADEIGVKSQVEVKE 566
>SB_31307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 71 NRRMLSSRTAST*SPPWKMRSLRTRLLTPISKSSWTSATTPSNGS 205
NRR SRT ++ S P++ R L T LT +KS A TP G+
Sbjct: 110 NRRGNISRTMTSQSEPYEGRKLPTSRLTNRNKS---RAKTPPGGT 151
>SB_24162| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 801
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/72 (26%), Positives = 28/72 (38%)
Frame = +1
Query: 19 NEAEKYRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQIIMDKCNDTIK 198
N + R +D K I+SKN F + + + +KD D II + D K
Sbjct: 199 NIKREMRKKDRMHKKAIKSKNQQHWEAFKRQCNLVSKLIKDSHNDYLNNIIGNSLKDNPK 258
Query: 199 WLDSNQLADKEE 234
S + K E
Sbjct: 259 KFWSYVRSSKSE 270
>SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)
Length = 1011
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 1 EIERMVNEAEK----YRTEDEKQKDTIQSKNALESYCFNMKSTMEDEKLKDKITDSDKQI 168
E E M E EK Y TE K+KD I + + N+K+ M + + +++ D Q
Sbjct: 496 ESEEMEGELEKKKDEYATETLKRKDDIIQELKQKVETLNLKANMNEVERRNEKLDEQLQK 555
Query: 169 IMDKCND 189
D+ ND
Sbjct: 556 QKDR-ND 561
>SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 131 SLRTRLLTPISKSSWTSATTPSNGSTRISWLI--RKSMSTSR 250
SL T L +P SKS + PS+G+ R++ + RKS + R
Sbjct: 1056 SLSTVLASPFSKSVAAQSLQPSSGTQRVAVSVTRRKSEAAER 1097
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,161,904
Number of Sequences: 59808
Number of extensions: 205353
Number of successful extensions: 1129
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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