Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A07
         (628 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DA1EAF Cluster: PREDICTED: hypothetical protein;...    36   0.60 
UniRef50_A2R6W0 Cluster: Contig An16c0060, complete genome; n=1;...    35   1.4  
UniRef50_Q5CWA0 Cluster: HBS1 eRFS. GTpase; n=2; Cryptosporidium...    33   4.2  
UniRef50_O14120 Cluster: Sorting nexin mvp1; n=1; Schizosaccharo...    33   4.2  
UniRef50_Q5DWA8 Cluster: Possible copy number protein; n=1; Clos...    33   7.4  
UniRef50_Q4HF30 Cluster: Putative uncharacterized protein; n=1; ...    32   9.8  

>UniRef50_UPI0000DA1EAF Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 279

 Score = 36.3 bits (80), Expect = 0.60
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = -1

Query: 232 LTKLYKHRKLVLPLLKKKHSDLFSKKQVSISILNTKLTT*PKRK 101
           L+KLY+  +  + L ++KH +L +KK++ IS LN  L T  K K
Sbjct: 158 LSKLYQDMQKKVELNEEKHKELMAKKEMEISELNATLKTQEKEK 201


>UniRef50_A2R6W0 Cluster: Contig An16c0060, complete genome; n=1;
           Aspergillus niger|Rep: Contig An16c0060, complete genome
           - Aspergillus niger
          Length = 678

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = -1

Query: 334 SAY-INLN-ISTVTSKNVHRKNWKREWNDFIMEDTFLTKLYKHRKLVLPLLKKKHSDLFS 161
           +AY +NL   ST++  +V  +   R WN  I+ DTF + LY  R   LP    +H  L  
Sbjct: 274 AAYALNLQETSTLSQTSVANETRSRCWNQIIISDTFCSILY-GRPASLPSANVRHLQLVD 332

Query: 160 KKQVSISILN 131
              +  S+LN
Sbjct: 333 DLAIDHSLLN 342


>UniRef50_Q5CWA0 Cluster: HBS1 eRFS. GTpase; n=2;
           Cryptosporidium|Rep: HBS1 eRFS. GTpase - Cryptosporidium
           parvum Iowa II
          Length = 530

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 15/64 (23%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +3

Query: 18  IRC-KYLSMLIFSLEKYYYEI*KKNILIYLRFGYVVSLVLSIEIDTCFFENRSECFFFNK 194
           ++C K+L+ ++ S +  ++ +  ++ +IY       +++LS+  D  +FE   E   +NK
Sbjct: 442 VKCLKFLNEILLSSKNIFWNVPGQSFMIYYHCEASPAILLSVRDDIFYFETEKEIVSYNK 501

Query: 195 GNTN 206
            + N
Sbjct: 502 CSCN 505


>UniRef50_O14120 Cluster: Sorting nexin mvp1; n=1;
           Schizosaccharomyces pombe|Rep: Sorting nexin mvp1 -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 664

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -1

Query: 304 VTSKNVHRKNWKREWNDFIMEDTFLTKLYKHRKLVLPLLKKKHSDLFSKKQ 152
           + S + + +   R ++DF    ++L K Y  R++ L  LKK HS  F+ KQ
Sbjct: 307 IISDSSNTREVLRRYSDFFWLHSYLMKKYPFRRVPLIPLKKFHSKCFNSKQ 357


>UniRef50_Q5DWA8 Cluster: Possible copy number protein; n=1;
           Clostridium perfringens|Rep: Possible copy number
           protein - Clostridium perfringens
          Length = 161

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
 Frame = +3

Query: 9   FTYIRCKYLSMLIFSLEKYYYEI*KKNILI-----YLRFGYVVSLVLSIEIDTCFFENRS 173
           F+ I   +L M+  S++ YY+   K+N+ +     Y+RFG V+ L+  + + + F +N+ 
Sbjct: 7   FSIIILIFLIMIFKSIQYYYFLKDKQNLYVLIKKKYMRFGIVLILLTILNLLSIFIQNKI 66

Query: 174 ECFFFN 191
           +  F +
Sbjct: 67  QPVFIS 72


>UniRef50_Q4HF30 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter coli RM2228|Rep: Putative uncharacterized
           protein - Campylobacter coli RM2228
          Length = 315

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = -1

Query: 295 KNVHRKNWKREWNDFIMEDTFLTKLYKHRKLVLPLLKKKHSDLFSKKQVS 146
           KN+ ++  ++E+++FI+ + +  K+ K  + +   LK K  DLF K   S
Sbjct: 256 KNLPKEENEKEFSNFILVNIYWNKIRKDLENLKTTLKNKQEDLFIKNSTS 305


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,245,180
Number of Sequences: 1657284
Number of extensions: 8914284
Number of successful extensions: 20139
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20138
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)