Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A07
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.8  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 220 YKHRKLVLPLLKKKHSDLFSKKQVSISILN 131
           YKH +LV+PL K    DL  +    I  LN
Sbjct: 203 YKHAELVMPLCKS--CDLHHRLSKLIKQLN 230


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 225 LVKNVSSIIKSFHSRFQFLR*TFLE 299
           +++ ++S++KS  SR+  L   FL+
Sbjct: 320 IIELMTSVVKSLESRYADLNENFLQ 344



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 349 NIF*ISAYINLNISTVTSK 293
           NIF I+ + N N +T+ SK
Sbjct: 416 NIFLITPFYNFNENTIHSK 434


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,377
Number of Sequences: 336
Number of extensions: 2520
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)