BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A07
(628 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC039102-1|AAH39102.1| 268|Homo sapiens Unknown (protein for IM... 36 0.16
>BC039102-1|AAH39102.1| 268|Homo sapiens Unknown (protein for
IMAGE:4829003) protein.
Length = 268
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = -1
Query: 232 LTKLYKHRKLVLPLLKKKHSDLFSKKQVSISILNTKLTT*PKRK 101
++KLY+ + + L ++KH +L KK++ IS LN KL + K K
Sbjct: 147 ISKLYQDMQRKVELNEEKHKELIEKKEMEISELNAKLRSQVKEK 190
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,157,789
Number of Sequences: 237096
Number of extensions: 1192877
Number of successful extensions: 1887
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1887
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -