BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A07
(628 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061592-1|AAL29140.1| 1002|Drosophila melanogaster SD04291p pro... 29 3.9
AL021726-1|CAA16809.1| 1002|Drosophila melanogaster EG:171E4.1,F... 29 3.9
AE014298-240|AAF45652.1| 1002|Drosophila melanogaster CG3093-PA ... 29 3.9
X86683-1|CAA60382.1| 1002|Drosophila melanogaster deep orange (d... 29 5.1
AE014296-2182|AAF49887.2| 3892|Drosophila melanogaster CG32113-P... 29 6.8
>AY061592-1|AAL29140.1| 1002|Drosophila melanogaster SD04291p
protein.
Length = 1002
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = -1
Query: 283 RKNWKREWNDFIMEDTFLTKLYKHRKLVLPLLKKKHSDLFSKKQVSISI 137
R +W+ E+++F+ME L+ ++R+ V L+ +H+D + Q +I+I
Sbjct: 552 RSSWQTEYDEFMMEAHVLSCTRQNRETVRQLI-AEHADPRNMAQFAIAI 599
>AL021726-1|CAA16809.1| 1002|Drosophila melanogaster
EG:171E4.1,FBgn0000482;dor protein.
Length = 1002
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = -1
Query: 283 RKNWKREWNDFIMEDTFLTKLYKHRKLVLPLLKKKHSDLFSKKQVSISI 137
R +W+ E+++F+ME L+ ++R+ V L+ +H+D + Q +I+I
Sbjct: 552 RSSWQTEYDEFMMEAHVLSCTRQNRETVRQLI-AEHADPRNMAQFAIAI 599
>AE014298-240|AAF45652.1| 1002|Drosophila melanogaster CG3093-PA
protein.
Length = 1002
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = -1
Query: 283 RKNWKREWNDFIMEDTFLTKLYKHRKLVLPLLKKKHSDLFSKKQVSISI 137
R +W+ E+++F+ME L+ ++R+ V L+ +H+D + Q +I+I
Sbjct: 552 RSSWQTEYDEFMMEAHVLSCTRQNRETVRQLI-AEHADPRNMAQFAIAI 599
>X86683-1|CAA60382.1| 1002|Drosophila melanogaster deep orange (dor)
protein.
Length = 1002
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = -1
Query: 283 RKNWKREWNDFIMEDTFLTKLYKHRKLVLPLLKKKHSDLFSKKQVSISI 137
R +W+ E+++F+ME L+ ++R+ V L+ +H+D + Q +I+I
Sbjct: 552 RSSWQTEYDEFMMEAHVLSCTRQNRETVRHLI-AEHADPRNMAQFAIAI 599
>AE014296-2182|AAF49887.2| 3892|Drosophila melanogaster CG32113-PA
protein.
Length = 3892
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -2
Query: 165 SQKNRYQSQYLILN*QHNRSVNK*VCFFFIFHNNIFQEKILTLTNI 28
S+K+ +S L+ N + +NK V ++ HN I+ + ++ TN+
Sbjct: 723 SEKSGSESPTLLENPKTESFLNKNVQLEYVLHNKIYDKYLINFTNL 768
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,814,055
Number of Sequences: 53049
Number of extensions: 372572
Number of successful extensions: 879
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -