Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A06
(319 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4QQD5 Cluster: Gag protein; n=3; Schistosoma|Rep: Gag ... 44 7e-04
UniRef50_UPI0000E4A4EC Cluster: PREDICTED: similar to gag-pol po... 43 0.001
UniRef50_A0ND94 Cluster: ENSANGP00000030026; n=1; Anopheles gamb... 42 0.003
UniRef50_UPI00015B479F Cluster: PREDICTED: similar to gag-pol po... 38 0.043
UniRef50_Q4EB84 Cluster: Gag-pol polyprotein, putative; n=1; Wol... 36 0.17
UniRef50_Q9BM80 Cluster: Gag-pol polyprotein; n=15; Bilateria|Re... 36 0.23
UniRef50_Q4QQF9 Cluster: Gag protein; n=1; Schistosoma mansoni|R... 35 0.30
UniRef50_UPI00015B4374 Cluster: PREDICTED: similar to gag-pol po... 35 0.40
UniRef50_Q6IFU4 Cluster: Gag protein; n=4; Schistosoma|Rep: Gag ... 33 1.2
UniRef50_Q6IFT9 Cluster: Gag protein; n=1; Schistosoma mansoni|R... 33 1.2
UniRef50_A4AIL7 Cluster: Putative serine/threonine protein kinas... 32 2.1
UniRef50_Q58695 Cluster: Dethiobiotin synthetase; n=7; Methanoco... 32 2.1
UniRef50_UPI000065D4FB Cluster: UPI000065D4FB related cluster; n... 31 5.0
UniRef50_UPI0000DB7011 Cluster: PREDICTED: similar to CG33519-PB... 31 6.6
UniRef50_A4BH93 Cluster: Beta-glucanase/Beta-glucan synthetase; ... 31 6.6
UniRef50_A0NAL3 Cluster: ENSANGP00000025625; n=1; Anopheles gamb... 31 6.6
UniRef50_Q5VST9 Cluster: Obscurin; n=50; Amniota|Rep: Obscurin -... 31 6.6
UniRef50_UPI00015B4618 Cluster: PREDICTED: similar to Gag and Po... 30 8.7
UniRef50_Q4A6L4 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_Q3ASK8 Cluster: Transposase; n=5; Bacteria|Rep: Transpo... 30 8.7
UniRef50_Q1R3M6 Cluster: 2-oxoglutarate dehydrogenase E1 compone... 30 8.7
UniRef50_A5KIP0 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_Q86UC2 Cluster: Radial spokehead-like protein 2; n=43; ... 30 8.7
UniRef50_A2AAJ9 Cluster: Obscurin; n=10; Eutheria|Rep: Obscurin ... 30 8.7
>UniRef50_Q4QQD5 Cluster: Gag protein; n=3; Schistosoma|Rep: Gag
protein - Schistosoma mansoni (Blood fluke)
Length = 281
Score = 44.0 bits (99), Expect = 7e-04
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 100 SKERRQFCWYHWKFRDQAIKCRSPCSY 180
S++ QFCWYHWKF + KC PC++
Sbjct: 244 SRQPGQFCWYHWKFGVNSTKCMQPCAW 270
>UniRef50_UPI0000E4A4EC Cluster: PREDICTED: similar to gag-pol
polyprotein; n=6; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to gag-pol polyprotein -
Strongylocentrotus purpuratus
Length = 787
Score = 43.2 bits (97), Expect = 0.001
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 73 PSLHSSRTSSKERRQF---CWYHWKFRDQAIKCRSPCSYQGNAPGSR*CRPKTTG-SSIG 240
P SR+ S+ ++ CWYHW+ +A KC SPCSY +A SR + G +
Sbjct: 247 PRQSVSRSPSRHQQHAGAECWYHWRHGKRAQKCISPCSY--SAGQSRPGYVQGNGPAKEY 304
Query: 241 RLVYYRXXXXXXXXXXDTGSDLCVYP 318
RL + DTG+++ ++P
Sbjct: 305 RLFFVHDKQSGTRFLVDTGAEVSIFP 330
>UniRef50_A0ND94 Cluster: ENSANGP00000030026; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000030026 - Anopheles gambiae
str. PEST
Length = 262
Score = 41.9 bits (94), Expect = 0.003
Identities = 12/30 (40%), Positives = 23/30 (76%)
Frame = +1
Query: 91 RTSSKERRQFCWYHWKFRDQAIKCRSPCSY 180
++ S++R+ FCWYH+++ + A KC PC++
Sbjct: 220 QSPSRDRKPFCWYHYRYGNGATKCVKPCNF 249
>UniRef50_UPI00015B479F Cluster: PREDICTED: similar to gag-pol
polyprotein; n=3; Nasonia vitripennis|Rep: PREDICTED:
similar to gag-pol polyprotein - Nasonia vitripennis
Length = 1557
Score = 37.9 bits (84), Expect = 0.043
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +1
Query: 73 PSLHSSRTSSKERRQFCWYHWKFRDQAIKCRSPCSYQGNAPGSR*CRPKTTGSSIGRLVY 252
P+ SR+ + C++H KF +A C+ PC+++ +APG + + + RL +
Sbjct: 400 PARSKSRSKLSNDKSLCFFHRKFGTEAKNCQLPCTWK-HAPGQD-YKTDSRLHAATRL-H 456
Query: 253 YRXXXXXXXXXXDTGSDLCVYP 318
R DTG+D+ V P
Sbjct: 457 VRDRISKEVFLIDTGADISVIP 478
>UniRef50_Q4EB84 Cluster: Gag-pol polyprotein, putative; n=1;
Wolbachia endosymbiont of Drosophila ananassae|Rep:
Gag-pol polyprotein, putative - Wolbachia endosymbiont
of Drosophila ananassae
Length = 278
Score = 35.9 bits (79), Expect = 0.17
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 82 HSSRTSSKERRQFCWYHWKFRDQAIKCRSPCSY 180
+++ ++ + +Q CWYH K+ A +C PCS+
Sbjct: 236 NNAPSNDRSSQQLCWYHNKYGRDAQRCSQPCSF 268
>UniRef50_Q9BM80 Cluster: Gag-pol polyprotein; n=15; Bilateria|Rep:
Gag-pol polyprotein - Clonorchis sinensis
Length = 1311
Score = 35.5 bits (78), Expect = 0.23
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 14/91 (15%)
Frame = +1
Query: 88 SRTSSKERRQFCWYHWKF-------RDQAIKCRSPCSY--QGNAPGSR*CRPKTTGSSIG 240
SR+ S+ R +CWYH F QA KC+ PCS+ + N P + + T + G
Sbjct: 225 SRSLSRARPSWCWYHQTFGPQAHKTPHQARKCQPPCSFKPRSNTPCKQPGQSVTATTVCG 284
Query: 241 -----RLVYYRXXXXXXXXXXDTGSDLCVYP 318
RL + DTG+++ V P
Sbjct: 285 PPRTSRLFHITDRSSGLRFLVDTGAEVSVLP 315
>UniRef50_Q4QQF9 Cluster: Gag protein; n=1; Schistosoma mansoni|Rep:
Gag protein - Schistosoma mansoni (Blood fluke)
Length = 232
Score = 35.1 bits (77), Expect = 0.30
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 76 SLHSSRTSSKERRQFCWYHWKFRDQAIKCRSPCSYQGNAP 195
S H R S K CWYH + ++A C PC+++ N P
Sbjct: 184 SRHRLR-SPKRAAGICWYHSNYGEKARCCTKPCNFKTNNP 222
>UniRef50_UPI00015B4374 Cluster: PREDICTED: similar to gag-pol
polyprotein; n=2; Nasonia vitripennis|Rep: PREDICTED:
similar to gag-pol polyprotein - Nasonia vitripennis
Length = 1189
Score = 34.7 bits (76), Expect = 0.40
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 121 CWYHWKFRDQAIKCRSPCSYQGNAPGSR*CRPKTTGSS 234
C+YH +F QA CR PC++ +A +TT +S
Sbjct: 305 CYYHQRFGYQATNCRQPCTFPTSAENRLHVLDRTTNTS 342
>UniRef50_Q6IFU4 Cluster: Gag protein; n=4; Schistosoma|Rep: Gag
protein - Schistosoma mansoni (Blood fluke)
Length = 277
Score = 33.1 bits (72), Expect = 1.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 88 SRTSSKERRQFCWYHWKFRDQAIKCRSPCSY 180
SR + +CWYH ++ + CR PC+Y
Sbjct: 227 SRPRETDNPDWCWYHNQYGKFSRNCRKPCNY 257
>UniRef50_Q6IFT9 Cluster: Gag protein; n=1; Schistosoma mansoni|Rep:
Gag protein - Schistosoma mansoni (Blood fluke)
Length = 288
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 118 FCWYHWKFRDQAIKCRSPCSYQ-GN 189
+CW+H F A CR+PCSY+ GN
Sbjct: 259 WCWFHRAFGAGARHCRAPCSYKAGN 283
>UniRef50_A4AIL7 Cluster: Putative serine/threonine protein kinase;
n=1; marine actinobacterium PHSC20C1|Rep: Putative
serine/threonine protein kinase - marine actinobacterium
PHSC20C1
Length = 432
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGVNFVGTTGSF-VIKLSSAVHLVAT 181
LHY+H RG H DV P I+L H F F + +L L +T
Sbjct: 138 LHYMHGRGIVHRDVKPANILLAHSELPDRQFHAKLADFGIARLVDGSRLTST 189
>UniRef50_Q58695 Cluster: Dethiobiotin synthetase; n=7;
Methanococcales|Rep: Dethiobiotin synthetase -
Methanococcus jannaschii
Length = 214
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 68 VSPVCIVLEHHRKKGVNFVGTTGSFVIKLSSAVHLVATRETRRAVGNV 211
++ + +EH R KG+N G + + LS ++ T ET VGN+
Sbjct: 146 INHTLLTVEHLRNKGINVRGVIINCITDLSEVLYYEKTFETIEKVGNI 193
>UniRef50_UPI000065D4FB Cluster: UPI000065D4FB related cluster; n=1;
Takifugu rubripes|Rep: UPI000065D4FB UniRef100 entry -
Takifugu rubripes
Length = 439
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 94 TSSKERRQFCWYHWKFRDQAIKCRSPCSY--QGNAPGS 201
+S + + C++H +F +A +C PC++ QGNA S
Sbjct: 184 SSQRRKSDPCFFHQRFGHKAPRCVPPCAFETQGNARAS 221
>UniRef50_UPI0000DB7011 Cluster: PREDICTED: similar to CG33519-PB
isoform 1; n=1; Apis mellifera|Rep: PREDICTED: similar to
CG33519-PB isoform 1 - Apis mellifera
Length = 2794
Score = 30.7 bits (66), Expect = 6.6
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGVNFVGT-TGSFVIKLSSAV 166
L YLH RG H+D+ P IV+ + R V V + V KL + V
Sbjct: 2582 LQYLHWRGYSHLDIQPDNIVMSNVRSVQVKLVDMGSARLVSKLGTLV 2628
>UniRef50_A4BH93 Cluster: Beta-glucanase/Beta-glucan synthetase;
n=1; Reinekea sp. MED297|Rep: Beta-glucanase/Beta-glucan
synthetase - Reinekea sp. MED297
Length = 701
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -1
Query: 181 GSYKVNGT**LDHETSSGTNKIDAFLSMMFENYANWAYVHVT 56
GS NG + +SG N IDA + +F N ++WA VH T
Sbjct: 606 GSDDGNGDDSSNEPNASGVNYIDANTAEVFLNTSDWADVHYT 647
>UniRef50_A0NAL3 Cluster: ENSANGP00000025625; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000025625 - Anopheles gambiae
str. PEST
Length = 199
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 88 SRTSSKE-RRQFCWYHWKFRDQAIKCRSPCSYQGN 189
SRT S+ RR CW+H++ ++A KC S N
Sbjct: 148 SRTPSRAPRRWICWFHYRHGNKAEKCEKEHSNDTN 182
>UniRef50_Q5VST9 Cluster: Obscurin; n=50; Amniota|Rep: Obscurin - Homo
sapiens (Human)
Length = 7968
Score = 30.7 bits (66), Expect = 6.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGV 115
LHYLH+ G H+D+ P I++ H ++ +
Sbjct: 6575 LHYLHSHGVLHLDIKPSNILMVHPAREDI 6603
>UniRef50_UPI00015B4618 Cluster: PREDICTED: similar to Gag and Pol,
partial; n=2; Nasonia vitripennis|Rep: PREDICTED:
similar to Gag and Pol, partial - Nasonia vitripennis
Length = 1574
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = +1
Query: 85 SSRTSSKER----RQFCWYHWKFRDQAIKCRSP 171
S R+ SK R FC +HWKF +A K ++P
Sbjct: 691 SGRSKSKPRYSNNTNFCTFHWKFGKEARKLKNP 723
>UniRef50_Q4A6L4 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma synoviae 53|Rep: Putative uncharacterized
protein - Mycoplasma synoviae (strain 53)
Length = 1969
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 210 SAKNDWLFYWPPCLLQTFKPTIRSFTRHWF 299
S+K D FYW P F IRSF W+
Sbjct: 1709 SSKRDNYFYWLPKYTNNFFGKIRSFNNGWY 1738
>UniRef50_Q3ASK8 Cluster: Transposase; n=5; Bacteria|Rep:
Transposase - Chlorobium chlorochromatii (strain CaD3)
Length = 411
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +3
Query: 150 SYQVPFTL*LPGKRAGQSVMSAKNDWLFYWPPCLLQTFKPTIRSFTRHWFGLM 308
+YQV K+A S N W + L+ K R+ RHW+G++
Sbjct: 302 AYQVKLNFQEFFKQAPAYAQSFLNQWYYSASHSRLEPIKEAARTIKRHWYGIL 354
>UniRef50_Q1R3M6 Cluster: 2-oxoglutarate dehydrogenase E1 component;
n=5; Enterobacteriaceae|Rep: 2-oxoglutarate
dehydrogenase E1 component - Escherichia coli (strain
UTI89 / UPEC)
Length = 939
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 189 RAGQSVMSAK-NDWLFYWPPCLLQTFKPTIRSFTRHWFGL 305
+A Q M+A+ DWL Q KP I SF+ +W+GL
Sbjct: 500 QAQQDEMTARYRDWLDSCQKREPQPLKPAIHSFSANWYGL 539
>UniRef50_A5KIP0 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 459
Score = 30.3 bits (65), Expect = 8.7
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +2
Query: 29 LHYLHAR---GGGHVDVSPVCIVLEHHRKKGVNFVGTTGSFVIKLSSAVHLVATRETRRA 199
L YL A G G D ++ H + VG+T L++AV A R R
Sbjct: 370 LRYLWAMIGGGSGIADAQGAFLLFTHWLLFVIAAVGSTAYGRKLLNNAVRFSANRTVRMT 429
Query: 200 VGNVGQKRLALLLAALFITDF*TYNSIFY 286
VG V + L A +TD T+N Y
Sbjct: 430 VGAVLYIGIFFLSVAFLVTD--TFNPFLY 456
>UniRef50_Q86UC2 Cluster: Radial spokehead-like protein 2; n=43;
Eumetazoa|Rep: Radial spokehead-like protein 2 - Homo
sapiens (Human)
Length = 560
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 17 PAP*LHYLHARGGGHVDVSPVCIVLEHHRKKG 112
P P HYLH G H ++P C + HRK+G
Sbjct: 108 PCP-WHYLHL-SGSHNTLAPTCFKAKLHRKRG 137
>UniRef50_A2AAJ9 Cluster: Obscurin; n=10; Eutheria|Rep: Obscurin - Mus
musculus (Mouse)
Length = 8891
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGV 115
LHYLH+ G H+D+ P I++ H ++ +
Sbjct: 7522 LHYLHSHGILHLDIKPPNILMVHPAREDI 7550
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,677,773
Number of Sequences: 1657284
Number of extensions: 6206668
Number of successful extensions: 13407
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13404
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -