Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A06
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   5.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   5.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   5.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   5.5  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    20   5.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      19   9.5  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 92  RELCKLGLRPRDLRRERVDNAATGRG 15
           + L +LGLR  D   +  D+   G+G
Sbjct: 166 QHLQELGLRLEDANSDEQDDGDDGQG 191


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 92  RELCKLGLRPRDLRRERVDNAATGRG 15
           + L +LGLR  D   +  D+   G+G
Sbjct: 166 QHLQELGLRLEDANSDEQDDGDDGQG 191


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 301 PNQCLVKDRIVGLK 260
           PNQC++  R++  K
Sbjct: 134 PNQCVICHRVLSCK 147


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 92  RELCKLGLRPRDLRRERVDNAATGRG 15
           + L +LGLR  D   +  D+   G+G
Sbjct: 166 QHLQELGLRLEDANSDEQDDGDDGQG 191


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 293 VSSKRSNCRFKSL**TRRPIEEPVVFGRHYRL 198
           VSS+ S  +FK L   RR +E  +  G + RL
Sbjct: 208 VSSEVSLPQFKVLGHRRRAVEISLTTGNYSRL 239


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 232 KSQSFLADITDCPARFPGSYKVN 164
           + +S L D+T+   +  GSY  N
Sbjct: 39  EEKSSLIDLTESEEKSGGSYSSN 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,451
Number of Sequences: 336
Number of extensions: 1494
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)