Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A06
(319 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual 28 0.30
SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase Cka1|Sch... 27 0.52
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 1.6
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 1.6
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 25 2.1
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 24 4.8
SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomy... 24 4.8
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 23 8.5
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 23 8.5
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 23 8.5
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 23 8.5
>SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 28.3 bits (60), Expect = 0.30
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 217 LADITDCPARFPGSYKVNG 161
L D+T+ P RF +YKVNG
Sbjct: 501 LLDVTELPVRFKLTYKVNG 519
>SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase
Cka1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 27.5 bits (58), Expect = 0.52
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKK 109
L + H+RG H DV P ++++H ++K
Sbjct: 148 LDFCHSRGIMHRDVKPHNVMIDHKKRK 174
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 1.6
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +2
Query: 65 DVSPVCIVLEHHRKKGVNFVGTTGSFVIKLSSAVHLVATRETRRAVGNVGQKRLALLLAA 244
DV P+ + H RK G+ T + V+ SSA + + + + V +V K + +
Sbjct: 123 DVHPIAELKGHSRKVGLVQYHPTAANVLASSSADNTIKLWDCEKGVAHVSLKMDVMCQSM 182
Query: 245 LFITD 259
F D
Sbjct: 183 SFNAD 187
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.8 bits (54), Expect = 1.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHH 100
L Y+H+ G H DV P I+ +H+
Sbjct: 1232 LAYIHSCGVSHQDVKPENILFDHN 1255
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.4 bits (53), Expect = 2.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHR 103
L Y+H+RG H D+ P I L+ +R
Sbjct: 760 LAYIHSRGMMHRDLKPGNIFLDENR 784
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 24.2 bits (50), Expect = 4.8
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGVNFVGTTGSFVIKLSS 160
L YLH+RG H D+ I++++ K ++ G + + +S
Sbjct: 510 LEYLHSRGIVHRDIKGANILVDNKGKIKISDFGISKKLELNSTS 553
>SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 424
Score = 24.2 bits (50), Expect = 4.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 222 DWLFYWPPCLLQTFKPTIRSFTRHWFGLMCI 314
DW+ W CL F I F +FG++ +
Sbjct: 360 DWIMAWAWCLPAGFGSPIPYFYVAYFGVLLV 390
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 23.4 bits (48), Expect = 8.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 68 VSPVCIVLEHHRKKGVNFVGT 130
V+ + ++ HH K VNF+ T
Sbjct: 429 VNEILVMKSHHHKNIVNFIDT 449
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 23.4 bits (48), Expect = 8.5
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 134 GSFVIKLSSAVHLVATRETRRAVGNVGQKRLALLLAALFITDF 262
G F I + + + +A R + + G+K ++LL +F+ F
Sbjct: 500 GGFTIAAALSKYHIAKRLATSILAHAGRKPRSVLLTNMFVAMF 542
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 23.4 bits (48), Expect = 8.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 246 CLLQTFKPTIRSFTRHWFGLMCI 314
CLL + T +++ HW +C+
Sbjct: 263 CLLNDKRVTWKAYAGHWIARVCL 285
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 23.4 bits (48), Expect = 8.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEH 97
L Y+H++ H D+ P I+L+H
Sbjct: 1149 LAYIHSQHILHRDIKPANILLDH 1171
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,330,494
Number of Sequences: 5004
Number of extensions: 24217
Number of successful extensions: 51
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 85983492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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