Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A06
(319 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM231061-1|CAJ76912.1| 1960|Homo sapiens obscurin isoform B prot... 31 0.98
AL670729-4|CAH71670.2| 2582|Homo sapiens obscurin, cytoskeletal ... 31 0.98
AL353593-4|CAM27610.1| 2582|Homo sapiens obscurin, cytoskeletal ... 31 0.98
AB046859-1|BAB13465.2| 2584|Homo sapiens KIAA1639 protein protein. 31 0.98
BC050604-1|AAH50604.1| 560|Homo sapiens radial spoke head 3 hom... 30 1.3
AK057931-1|BAB71615.1| 560|Homo sapiens protein ( Homo sapiens ... 30 1.3
M55268-1|AAA51548.1| 350|Homo sapiens casein kinase II alpha' s... 29 3.0
BC008812-1|AAH08812.1| 350|Homo sapiens casein kinase 2, alpha ... 29 3.0
AY280362-1|AAP35084.1| 2386|Homo sapiens EGF domain-containing p... 28 5.2
AB011541-1|BAA32469.2| 2785|Homo sapiens MEGF8 protein. 28 5.2
AF088446-1|AAD29542.1| 43|Homo sapiens T-cell receptor beta ch... 27 9.1
>AM231061-1|CAJ76912.1| 1960|Homo sapiens obscurin isoform B
protein.
Length = 1960
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGV 115
LHYLH+ G H+D+ P I++ H ++ +
Sbjct: 567 LHYLHSHGVLHLDIKPSNILMVHPAREDI 595
>AL670729-4|CAH71670.2| 2582|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 2582
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGV 115
LHYLH+ G H+D+ P I++ H ++ +
Sbjct: 1191 LHYLHSHGVLHLDIKPSNILMVHPAREDI 1219
>AL353593-4|CAM27610.1| 2582|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 2582
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGV 115
LHYLH+ G H+D+ P I++ H ++ +
Sbjct: 1191 LHYLHSHGVLHLDIKPSNILMVHPAREDI 1219
>AB046859-1|BAB13465.2| 2584|Homo sapiens KIAA1639 protein protein.
Length = 2584
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGV 115
LHYLH+ G H+D+ P I++ H ++ +
Sbjct: 1191 LHYLHSHGVLHLDIKPSNILMVHPAREDI 1219
>BC050604-1|AAH50604.1| 560|Homo sapiens radial spoke head 3
homolog (Chlamydomonas) protein.
Length = 560
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 17 PAP*LHYLHARGGGHVDVSPVCIVLEHHRKKG 112
P P HYLH G H ++P C + HRK+G
Sbjct: 108 PCP-WHYLHL-SGSHNTLAPTCFKAKLHRKRG 137
>AK057931-1|BAB71615.1| 560|Homo sapiens protein ( Homo sapiens
cDNA FLJ25202 fis, clone REC05350. ).
Length = 560
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 17 PAP*LHYLHARGGGHVDVSPVCIVLEHHRKKG 112
P P HYLH G H ++P C + HRK+G
Sbjct: 108 PCP-WHYLHL-SGSHNTLAPTCFKAKLHRKRG 137
>M55268-1|AAA51548.1| 350|Homo sapiens casein kinase II alpha'
subunit protein.
Length = 350
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKK 109
L Y H++G H DV P ++++H +KK
Sbjct: 145 LDYCHSKGIMHRDVKPHNVMIDHQQKK 171
>BC008812-1|AAH08812.1| 350|Homo sapiens casein kinase 2, alpha
prime polypeptide protein.
Length = 350
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKK 109
L Y H++G H DV P ++++H +KK
Sbjct: 145 LDYCHSKGIMHRDVKPHNVMIDHQQKK 171
>AY280362-1|AAP35084.1| 2386|Homo sapiens EGF domain-containing
protein protein.
Length = 2386
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 133 WKFRDQAIKCRSPCSYQGNAPGSR*CRP 216
W + + +CR P S+ GNA GSR CRP
Sbjct: 726 WTWGEHCERCR-PGSF-GNATGSRGCRP 751
>AB011541-1|BAA32469.2| 2785|Homo sapiens MEGF8 protein.
Length = 2785
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 133 WKFRDQAIKCRSPCSYQGNAPGSR*CRP 216
W + + +CR P S+ GNA GSR CRP
Sbjct: 1125 WTWGEHCERCR-PGSF-GNATGSRGCRP 1150
>AF088446-1|AAD29542.1| 43|Homo sapiens T-cell receptor beta chain
protein.
Length = 43
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 82 HSSRTSSKERRQFCWYHWKFRDQAIKCRSP 171
HS+ ++ + W H +F DQ +CR P
Sbjct: 8 HSTVFLCQKNNRTLWLHLRFGDQVNRCRGP 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,822,503
Number of Sequences: 237096
Number of extensions: 942817
Number of successful extensions: 1549
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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