Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A06
(319 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 29 0.73
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 29 0.73
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 29 0.73
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 0.73
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 0.73
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical p... 27 2.2
AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical... 27 2.2
CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical ... 27 3.9
Z75552-5|CAA99938.1| 208|Caenorhabditis elegans Hypothetical pr... 26 5.1
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 26 5.1
U23453-4|AAC46756.2| 564|Caenorhabditis elegans Acid sphingomye... 25 8.9
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 25 8.9
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 25 8.9
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGVNFV 124
LH+LH +G H+DV+P I+ + R V V
Sbjct: 1237 LHFLHFKGIAHLDVNPHNIMFQSKRSWVVKLV 1268
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGVNFV 124
LH+LH +G H+DV+P I+ + R V V
Sbjct: 1201 LHFLHFKGIAHLDVNPHNIMFQSKRSWVVKLV 1232
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGVNFV 124
LH+LH +G H+DV+P I+ + R V V
Sbjct: 1204 LHFLHFKGIAHLDVNPHNIMFQSKRSWVVKLV 1235
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGVNFV 124
LH+LH +G H+DV+P I+ + R V V
Sbjct: 7249 LHFLHFKGIAHLDVNPHNIMFQSKRSWVVKLV 7280
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 0.73
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGVNFV 124
LH+LH +G H+DV+P I+ + R V V
Sbjct: 7889 LHFLHFKGIAHLDVNPHNIMFQSKRSWVVKLV 7920
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 110 LSFDDVRELCKLGLRPRDLR 51
L FDDV E C+LGLR D +
Sbjct: 138 LLFDDVLESCRLGLRKPDTK 157
>Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 159 LDSLITKLPVVPTKLTPFFR*CSRTMQTG 73
L +L+ LP +P TPFF S T QTG
Sbjct: 261 LPTLLFHLPALPVLFTPFFN-VSFTFQTG 288
>AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 159 LDSLITKLPVVPTKLTPFFR*CSRTMQTG 73
L +L+ LP +P TPFF S T QTG
Sbjct: 261 LPTLLFHLPALPVLFTPFFN-VSFTFQTG 288
>CU457744-3|CAM36369.1| 247|Caenorhabditis elegans Hypothetical
protein T06A10.4 protein.
Length = 247
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 70 KPSLHSSRTSSKERRQFCWYHWKFRDQAIKCRSP-CSY 180
KP + +++ + +CW D I+C +P C Y
Sbjct: 161 KPESEKAVAAAEPPKMYCWCQLDKNDTMIECENPGCKY 198
>Z75552-5|CAA99938.1| 208|Caenorhabditis elegans Hypothetical
protein W04D2.5 protein.
Length = 208
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 110 LSFDDVRELCKLGLRPRDLRR 48
+S D LC+LG RPR +RR
Sbjct: 187 VSISDHTPLCELGPRPRKIRR 207
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical
protein E03G2.2 protein.
Length = 1503
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 152 LSSAVHLVATRETRRAVGNVGQKRLALLLAAL 247
LS L ++E VG+VG + +LLLAAL
Sbjct: 647 LSDIEFLAGSKELVTVVGSVGSGKSSLLLAAL 678
>U23453-4|AAC46756.2| 564|Caenorhabditis elegans Acid
sphingomyelinase protein 1 protein.
Length = 564
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 94 TSSKERRQFCWYHWKFRDQAIKCRSPCSYQ 183
TS K+R +F Y + FR+ + +C S C Q
Sbjct: 518 TSEKKREKF--YQYAFRNFSPQCDSTCQMQ 545
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 135 PVVPTKLTPFFR*CSRTMQTGLTST*PPPR 46
P+ P+ +T SRT G T PPPR
Sbjct: 877 PLTPSSMTSSSSGASRTAGQGQQQTAPPPR 906
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 135 PVVPTKLTPFFR*CSRTMQTGLTST*PPPR 46
P+ P+ +T SRT G T PPPR
Sbjct: 916 PLTPSSMTSSSSGASRTAGQGQQQTAPPPR 945
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,591,752
Number of Sequences: 27780
Number of extensions: 145327
Number of successful extensions: 292
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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