Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A06
(319 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g22214.1 68417.m03212 expressed protein 30 0.39
At3g14570.1 68416.m01845 glycosyl transferase family 48 protein ... 28 1.6
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 28 1.6
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 28 1.6
At5g60670.1 68418.m07614 60S ribosomal protein L12 (RPL12C) 60S ... 27 2.1
At2g23070.1 68415.m02750 casein kinase II alpha chain, putative ... 27 2.1
At3g53430.1 68416.m05896 60S ribosomal protein L12 (RPL12B) 60S ... 27 2.7
At2g37190.1 68415.m04562 60S ribosomal protein L12 (RPL12A) 27 2.7
At5g27930.2 68418.m03359 protein phosphatase 2C, putative / PP2C... 27 3.6
At5g27930.1 68418.m03358 protein phosphatase 2C, putative / PP2C... 27 3.6
At2g45750.1 68415.m05691 dehydration-responsive family protein s... 27 3.6
At2g38490.1 68415.m04728 CBL-interacting protein kinase 22, puta... 26 4.8
At1g02970.1 68414.m00267 protein kinase, putative similar to Wee... 26 6.3
>At4g22214.1 68417.m03212 expressed protein
Length = 188
Score = 29.9 bits (64), Expect = 0.39
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 124 WYHWKFRDQAIKCRSPCSYQGNAP-GSR 204
WY W + D +C C Q N+P G+R
Sbjct: 125 WYLWPWYDSTKRCEETCQKQNNSPSGAR 152
>At3g14570.1 68416.m01845 glycosyl transferase family 48 protein
contains similarity to glucan synthases
Length = 1973
Score = 27.9 bits (59), Expect = 1.6
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 133 SGTNKIDAFLSMMFENYANW 74
SG +DA + F+NY NW
Sbjct: 283 SGDEAVDALMKKFFKNYTNW 302
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 77 VCIVLEHHRKKGVNFVGTTGSFVIKLSSAVHLVATRETRRAVGNVGQKRLALLLAALFIT 256
V + LEHHRK GTT +++ +++ ++R + V + L+A
Sbjct: 156 VDLELEHHRKIDSFNSGTTALTIVRQGDVIYIANVGDSRAVLATVSDE--GSLVAVQLTV 213
Query: 257 DF 262
DF
Sbjct: 214 DF 215
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 77 VCIVLEHHRKKGVNFVGTTGSFVIKLSSAVHLVATRETRRAVGNVGQKRLALLLAALFIT 256
V + LEHHRK GTT +++ +++ ++R + V + L+A
Sbjct: 156 VDLELEHHRKIDSFNSGTTALTIVRQGDVIYIANVGDSRAVLATVSDE--GSLVAVQLTV 213
Query: 257 DF 262
DF
Sbjct: 214 DF 215
>At5g60670.1 68418.m07614 60S ribosomal protein L12 (RPL12C) 60S
RIBOSOMAL PROTEIN L12 (like), Arabidopsis thaliana,
PIR:T45883
Length = 166
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 125 QQN*RLSFDDVRELCKLGLRPRDLRRE 45
+ N +SFDDV E+ K+ +RPR + +E
Sbjct: 100 KHNGNISFDDVIEIAKI-MRPRSIAKE 125
>At2g23070.1 68415.m02750 casein kinase II alpha chain, putative
similar to casein kinase II, alpha chain (CK II) [Zea
mays] SWISS-PROT:P28523; contains protein kinase domain,
Pfam:PF00069
Length = 432
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKK 109
L + H+RG H DV P ++++H ++K
Sbjct: 237 LDFCHSRGIMHRDVKPHNVMIDHEQRK 263
>At3g53430.1 68416.m05896 60S ribosomal protein L12 (RPL12B) 60S
RIBOSOMAL PROTEIN L12, Prunus armeniaca,
SWISSPROT:RL12_PRUAR
Length = 166
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -3
Query: 125 QQN*RLSFDDVRELCKLGLRPRDLRRE 45
+ N +SFDDV E+ ++ +RPR + +E
Sbjct: 100 KHNGNISFDDVTEIARI-MRPRSIAKE 125
>At2g37190.1 68415.m04562 60S ribosomal protein L12 (RPL12A)
Length = 166
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -3
Query: 125 QQN*RLSFDDVRELCKLGLRPRDLRRE 45
+ N +SFDDV E+ ++ +RPR + +E
Sbjct: 100 KHNGNISFDDVTEIARI-MRPRSIAKE 125
>At5g27930.2 68418.m03359 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase-2C, Mesembryanthemum
crystallinum, EMBL:AF075581
Length = 373
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 89 LEHHRKKGVNFVGTTGSFVIKLSSAVHLVATRETR 193
LEHHRK + GTT +++ +++ ++R
Sbjct: 165 LEHHRKIDSYYSGTTALTIVRQGEVIYVANVGDSR 199
>At5g27930.1 68418.m03358 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase-2C, Mesembryanthemum
crystallinum, EMBL:AF075581
Length = 373
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 89 LEHHRKKGVNFVGTTGSFVIKLSSAVHLVATRETR 193
LEHHRK + GTT +++ +++ ++R
Sbjct: 165 LEHHRKIDSYYSGTTALTIVRQGEVIYVANVGDSR 199
>At2g45750.1 68415.m05691 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 631
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 100 SKERRQFCWYHWKFRDQAIKCRSPCSYQGNAP 195
S+ER ++ H R++ +KCR P Y P
Sbjct: 110 SRERLEYRQRHCPEREEILKCRIPAPYGYKTP 141
>At2g38490.1 68415.m04728 CBL-interacting protein kinase 22,
putative (CIPK22) identical to CBL-interacting protein
kinase 22 [Arabidopsis thaliana] gi|17902248|gb|AAL47845
Length = 455
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEHHRKKGVNFVG 127
+ Y HARG H D+ P ++L+ +R V+ G
Sbjct: 162 VRYCHARGVFHRDLKPENLLLDENRDLKVSDFG 194
>At1g02970.1 68414.m00267 protein kinase, putative similar to
Wee1-like protein GI:5821717 from [Zea mays]
Length = 500
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 29 LHYLHARGGGHVDVSPVCIVLEH 97
LH++H +G H+DV P I +++
Sbjct: 360 LHFVHEKGIAHLDVKPDNIYIKN 382
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,171,118
Number of Sequences: 28952
Number of extensions: 135389
Number of successful extensions: 317
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 340508912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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