Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A04
(550 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 33 0.15
05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13... 32 0.35
03_06_0326 + 33150599-33150907,33151013-33151104,33151961-331520... 31 0.61
09_02_0516 - 10136400-10136516,10136606-10136894,10137578-101381... 30 1.1
07_02_0009 - 11716174-11716435,11716837-11717459,11718385-117184... 29 2.4
09_06_0127 + 21019266-21019670 28 4.3
12_02_0686 - 22076741-22077085 27 7.5
11_06_0610 - 25449085-25453284 27 7.5
09_04_0723 + 19736958-19737107,19737979-19738480,19738911-197390... 27 7.5
08_01_0081 - 574119-575204,575794-576191,576321-576382,576581-57... 27 7.5
05_05_0005 + 21442819-21442916,21443053-21443119,21443226-214432... 27 7.5
07_03_0495 + 18756415-18756499,18757163-18757491 27 9.9
02_05_0205 + 26755024-26756217 27 9.9
02_05_0078 - 25656695-25656888,25656941-25657127,25657765-256580... 27 9.9
02_02_0547 + 11399769-11399852,11399906-11400088,11400474-114005... 27 9.9
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 33.1 bits (72), Expect = 0.15
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 9/138 (6%)
Frame = +2
Query: 134 PREVESNDIIISEYIVHNDQTSKGDLQELGVERRSSGLSV-----DVGARPPAWPT-DSI 295
P+E ++D E T+ L E E R++G DV PA P D+
Sbjct: 911 PQE-HNSDATAKESSEPERDTASDQLAEQPSESRTAGEKATLRESDVVTEDPAEPQIDAA 969
Query: 296 S--TPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYE-PITPKSES 466
+ + EVLS + + H + ++ E + EP D S S E P+E E + + E
Sbjct: 970 AERSAEVLSESQTGVETPVLHQSDRTNEVPS-EPQTDEASDKSTEQPLEPENDASVEDEK 1028
Query: 467 HAESENDDVKPHPSKRRP 520
E E+DDV PS+ P
Sbjct: 1029 PPEIESDDVHDKPSESTP 1046
>05_01_0019 -
129767-129931,130078-130257,130491-130728,130833-131236,
131284-131427,131709-131995,132071-132150,132563-132714,
132793-132909,133292-133450,133546-133946,134106-134423,
135050-135095,135203-135310
Length = 932
Score = 31.9 bits (69), Expect = 0.35
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 71 HNTLPFIDQDDSFDTKFVSVTPREVESNDIIISEYIVHNDQTSKGDL 211
HN ++Q T+ +S T ++ S+ I I + HN+Q S GDL
Sbjct: 474 HNLFSPVNQQLESPTQCISTTGPQILSSPIRIKSTLQHNNQASVGDL 520
>03_06_0326 +
33150599-33150907,33151013-33151104,33151961-33152057,
33152585-33152656,33152750-33152812,33152905-33153045,
33153603-33153698,33154120-33154404,33154692-33154851,
33154947-33155089,33155688-33155861,33156386-33156652,
33156737-33156856
Length = 672
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +2
Query: 311 LSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESENDD 490
L + + +E++K S + +KE A D + + EPI ++ESH + E+
Sbjct: 403 LEHPDSIEQDKESEDEIDAKEKDATHIDDDDDDDDEDDKRYSPEPIAEQTESHLDEEDGS 462
Query: 491 VKP 499
P
Sbjct: 463 FSP 465
>09_02_0516 -
10136400-10136516,10136606-10136894,10137578-10138110,
10138719-10138892,10138898-10138903
Length = 372
Score = 30.3 bits (65), Expect = 1.1
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Frame = +2
Query: 206 DLQELGVERRSSGLSVDVGARPPAWPTDSISTP-----EVLSYVEQLEKEKC---SHTTL 361
DL E+ V R + ++ G RPP P+ S S P SY QL+ + T
Sbjct: 143 DLIEIRVTARPT---IEPGGRPPKRPSSSPSAPPAQDRHAQSYDVQLKYDTDFWEDRTEA 199
Query: 362 KSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESEND 487
SK + HEP P +S + SP P E E+D
Sbjct: 200 DSK--AIHEPPPMKKSRKAHSSPQRITLDKPMQRGEEEEESD 239
>07_02_0009 -
11716174-11716435,11716837-11717459,11718385-11718469,
11719346-11719374
Length = 332
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 362 KSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESEND 487
KS E A++P P L SP++ E TP+ S ++ + D
Sbjct: 171 KSGELGANDPLPPLPKQSPSSSPLKGEVATPEKPSTSKEKGD 212
>09_06_0127 + 21019266-21019670
Length = 134
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = +2
Query: 269 PPAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPI 448
P AWP TP L EQL S T+ SA G +S S+ P
Sbjct: 20 PAAWPAGWSFTPRELDAAEQLVLLSGSSTSTTGTTPSAAASGSSSTASSSRSVNAPPPPP 79
Query: 449 TP 454
TP
Sbjct: 80 TP 81
>12_02_0686 - 22076741-22077085
Length = 114
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 266 RPPAWPTDSISTPEVLSYVEQLEKEKCSHTTLK-----SKEWSAHEPGPDLESSC 415
R PA P + S P V S E K + S++ AHEP L+SSC
Sbjct: 47 RKPAEPEEGSSLPGVRSQPEGPGDPKAQSRASEGPRAGSRDLEAHEPAQRLQSSC 101
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/77 (25%), Positives = 24/77 (31%)
Frame = +2
Query: 281 PTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKS 460
PT TP EK H+ KS AH P E P TP+
Sbjct: 761 PTPEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEK 820
Query: 461 ESHAESENDDVKPHPSK 511
S ++ P P K
Sbjct: 821 SPSPPSGHEGTPPSPVK 837
Score = 27.1 bits (57), Expect = 9.9
Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Frame = +2
Query: 263 ARPPAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPD--LESSCSKESPVE 436
A P PT TP EK S T +S+ S P P+ + S PVE
Sbjct: 658 ASSPPPPTPEGHTPSPPKSTPPTEK---SPPTPESESSSPPPPAPEGHMPSPPKSTPPVE 714
Query: 437 YEPITPKSE--SHAESENDDVKPHPSKRRP 520
P TP+SE S + P P K P
Sbjct: 715 KSPPTPESEASSPPPPAPEGHTPSPPKSSP 744
>09_04_0723 +
19736958-19737107,19737979-19738480,19738911-19739061,
19739659-19739766,19739789-19739818,19739894-19740303,
19740797-19740882,19740989-19741058,19741413-19741585,
19741644-19741725,19742131-19742288
Length = 639
Score = 27.5 bits (58), Expect = 7.5
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 173 YIVHNDQTSKGDLQELGVERRSSGLSVDVGARPPAWPTDSI--STPEVLSYVEQLEKEKC 346
+I+ +QT+KG+ E+ +E + V + P +PT ++ + +L Y + L C
Sbjct: 245 FILQYEQTAKGNFAEMPIEELIKRMIGPVVEKHP-YPTTTVVAESYHILPYKDIL--FDC 301
Query: 347 SHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESEND 487
H+ L KE + +SS S P E KS SH+E + +
Sbjct: 302 LHSYLCMKEVCCRK--WHFDSSLS--MPKEETRRNGKSSSHSEIDEN 344
>08_01_0081 -
574119-575204,575794-576191,576321-576382,576581-576653,
576754-576824,576961-577148,577230-577377,577465-577503,
577601-577656,577745-577798,577900-578003,578117-578217,
578726-578796,578912-578968,579306-579422,579653-579682
Length = 884
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/37 (27%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 326 QLEKEKCSHTTLKSKEWSAH--EPGPDLESSCSKESP 430
+L+++ C++ L + W+ + EP P+++ +C + SP
Sbjct: 105 KLKEKNCTYHGLFPRSWTVYNGEPDPEIKITCRQISP 141
>05_05_0005 +
21442819-21442916,21443053-21443119,21443226-21443291,
21443368-21443414,21443480-21443543,21443627-21443707,
21443781-21443823,21443912-21443961,21444262-21444343,
21445045-21445120,21445451-21445558,21445782-21445833,
21445911-21446570,21446652-21448067
Length = 969
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/79 (20%), Positives = 29/79 (36%)
Frame = +2
Query: 272 PAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPIT 451
P STPE + + + KS S+ P P ++ + P T
Sbjct: 506 PKLKNSGSSTPEPAKQIAENGSSASGMSKTKSSPSSSRRPSPQRQTVAG----IPIVPFT 561
Query: 452 PKSESHAESENDDVKPHPS 508
+H ++E++ P P+
Sbjct: 562 VSKRAHIKAESEKTPPRPA 580
>07_03_0495 + 18756415-18756499,18757163-18757491
Length = 137
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 78 LCPSLIKMTPLILNLFL 128
LCPSL+ + PL+L L L
Sbjct: 74 LCPSLLTLVPLVLGLLL 90
>02_05_0205 + 26755024-26756217
Length = 397
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 389 PGPDLESSCSKESPVEYEPITPKSESHAESENDDVKP 499
P P + CS E+P++ + T ++ + E E D P
Sbjct: 293 PTPSPQLGCSMETPIQVDSETEETNTEPEIEPDITDP 329
>02_05_0078 -
25656695-25656888,25656941-25657127,25657765-25658067,
25658152-25658296,25658376-25658613,25658694-25658904,
25659060-25659175,25659420-25659468
Length = 480
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 128 VTPREVESNDIIISEYIVHNDQTSKGDLQELGV 226
V+ R + + + EY+VH T K D+ GV
Sbjct: 197 VSTRVIGTTGYMAPEYVVHGQLTKKADVYSFGV 229
>02_02_0547 +
11399769-11399852,11399906-11400088,11400474-11400578,
11400690-11400773,11400938-11401053,11401158-11401259,
11401339-11401452,11401540-11401596,11401681-11401873,
11402261-11402335,11402425-11402460,11402509-11402574,
11402575-11402688
Length = 442
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 308 VLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPK 457
++SY+E + T L SA+ + S S+E P Y P PK
Sbjct: 48 IISYIEDRNSGITTQTLLNHAWASANRHNKNNSDSTSEEVPKIYVPTNPK 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,348,090
Number of Sequences: 37544
Number of extensions: 252067
Number of successful extensions: 861
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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