Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A04
(550 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37659| Best HMM Match : Motilin_ghrelin (HMM E-Value=3.2) 32 0.27
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_19183| Best HMM Match : SOUL (HMM E-Value=2.1) 31 0.82
SB_8029| Best HMM Match : Mucin (HMM E-Value=8.6) 30 1.4
SB_42141| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 29 3.3
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 29 3.3
SB_55278| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_47335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_44242| Best HMM Match : SATase_N (HMM E-Value=0.27) 28 4.4
SB_42686| Best HMM Match : Pkinase (HMM E-Value=0) 28 5.8
SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_40497| Best HMM Match : NDT80_PhoG (HMM E-Value=5.1) 27 7.6
SB_17758| Best HMM Match : Transformer (HMM E-Value=0.35) 27 7.6
SB_8915| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) 27 7.6
SB_45736| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_29835| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_22869| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_37659| Best HMM Match : Motilin_ghrelin (HMM E-Value=3.2)
Length = 468
Score = 32.3 bits (70), Expect = 0.27
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 10/149 (6%)
Frame = +2
Query: 74 NTLPFIDQDDSFDTKFVSVTPREVESNDIIISEYIVHNDQTSKGDLQELGVERRSSGLSV 253
N + +D+DD +T F S ++V+ + ++ + + TS+ ++ + L
Sbjct: 200 NGVTDLDEDDELET-FTSSFQQQVKVKTLPVT--VTVRNATSETTERDQEHDTGDIALPQ 256
Query: 254 DVGARP---PAWPTDSI-STPEVLSYVEQLEKEKCSHTTLKSKEWSA------HEPGPDL 403
GA P A DS+ S PE L+ E+ E S+++LK A PGP +
Sbjct: 257 YKGAPPLVVVAEQADSVASAPETLAAREEGEAVVESNSSLKEDSVDATVVEAESTPGPQV 316
Query: 404 ESSCSKESPVEYEPITPKSESHAESENDD 490
S S+E E + ES ESE D
Sbjct: 317 VISGSEEESEEESEEYSEEESEEESEESD 345
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 31.5 bits (68), Expect = 0.47
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +2
Query: 239 SGLSVDVGAR---PPAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLES 409
+G + D AR PP+ PT +T + S + L + K T H P E+
Sbjct: 940 AGSTPDSSARFVTPPSGPTAEENTDLIRSELLGLLQSKTGGQTFGGAG-VGHSPLGASEN 998
Query: 410 SCSKESPVEYEPITPKSESHAESEND 487
S S + EYEP TP+ E E E D
Sbjct: 999 SYSLK---EYEPRTPEGEEEEEEEED 1021
>SB_19183| Best HMM Match : SOUL (HMM E-Value=2.1)
Length = 442
Score = 30.7 bits (66), Expect = 0.82
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Frame = +2
Query: 251 VDVGARPPAWPTDSISTPEVLSYVEQLEKEKCSHTT----LKSKEWSAHEPGPDLESSCS 418
V+ G R W + + E L V+++E + L+++ H P P+ S+C+
Sbjct: 147 VEAGRRLAKWNRINRAKKEALRVVQRVESPVAGESQGLEGLRARAEGIHTPVPESNSACA 206
Query: 419 KESPVEYEPITPKSESHAESENDDVKPHPSKRRP 520
S + + SH S + D + P RP
Sbjct: 207 SRS----RTVQISAVSHGVSRHLDTRAPPISARP 236
>SB_8029| Best HMM Match : Mucin (HMM E-Value=8.6)
Length = 325
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 269 PPAWPTDSISTPEVLSYVEQLEKEKCSHT--TLKSKEWSAHEPGPDLESSCSKESPVEYE 442
P P + + P+ + ++ E + T T K+KE++ ++P ES+ ++ S E+E
Sbjct: 177 PITIPKTTTNRPQTSTITAKITTESTTATQATTKTKEYTTNKPSTTEESTTNEASTAEFE 236
Query: 443 PIT 451
T
Sbjct: 237 STT 239
>SB_42141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 347 SHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESENDDVKP 499
+ T K+KE++ +P ES+ ++ S E+E T + E +KP
Sbjct: 6 TQATTKTKEYTTIKPSTTDESTTNEASTAEFESTTAAQATTKTKEYTSIKP 56
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 389 PGPDLESSCSKESPVEYEPITPKSESHAESENDDVKPHPSKR 514
P D+ S+E+PVE E + ++ H E+ ++ P S +
Sbjct: 1328 PEVDIAEPTSEETPVEGESLEAQAVGHVEAAGEETSPVQSNQ 1369
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/92 (22%), Positives = 32/92 (34%)
Frame = +2
Query: 272 PAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPIT 451
P PT + TP + K T+ +K A P P +K +P + P T
Sbjct: 61 PTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTP------TKPTPTAHTPTT 114
Query: 452 PKSESHAESENDDVKPHPSKRRPXXXXXXXET 547
P +H ++ P P+ P T
Sbjct: 115 PTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPT 146
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 389 PGPDLESSCSKESPVEYEPITPKSESHAESENDDVKPHPSKR 514
P D+ S+E+PVE E + ++ H E+ ++ P S +
Sbjct: 223 PEVDIAEPTSEETPVEGESLEAQAVGHVEAAGEETSPVQSNQ 264
>SB_55278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 329 LEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESP 430
L+ H T +S++WS + P ++ C++E P
Sbjct: 214 LKIRNAGHNTPESRQWSKYLKNPKNKTVCAREGP 247
>SB_47335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 350 HTTLKSKEWSAHEPG-PDLESSCSKESPVEYEPITPKSESHAESENDDV 493
+ TL+ SAH+P D+ S + + + P+T +SH S +DDV
Sbjct: 360 YDTLRLAHVSAHKPSLSDVRKSIRDTADLSF-PMTLPEDSHKSSPDDDV 407
>SB_44242| Best HMM Match : SATase_N (HMM E-Value=0.27)
Length = 426
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +2
Query: 299 TPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAES 478
TP ++S + +K S L+ ++ +P PD S + + + P TP+ S A++
Sbjct: 211 TPSIVSLCSSIN-DKLS-VILEDAQYLIADPKPDNASPATPKQSIFVPPGTPRQSSFAQN 268
Query: 479 ENDDVKP 499
E P
Sbjct: 269 EAGHQSP 275
>SB_42686| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 759
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 68 THNTLPFIDQDDSFDTKFVSVTPREVESNDIIISE 172
T T+ F D F V++TPR+ S DI+++E
Sbjct: 19 TSKTVIFYKNGDVFSKYPVTITPRKYRSFDILLAE 53
>SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +2
Query: 77 TLPFIDQ----DDSFDTKFVSVTPREVESNDIIIS 169
++PF D DD+ D ++ V E+E ND+I++
Sbjct: 295 SVPFWDDNEYYDDTIDNNYIDVVADEIERNDLIMT 329
>SB_40497| Best HMM Match : NDT80_PhoG (HMM E-Value=5.1)
Length = 360
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 269 PPAWPTDSISTPEVLSYVEQLEKEKCSHT--TLKSKEWSAHEPGPDLESSCSKESPVEYE 442
P P + + P+ + ++ E + T T K+KE++ +P ES+ ++ S E+E
Sbjct: 250 PITIPKITTNRPQTSTITAKITTESTTATQATTKTKEYTTIKPSTTEESTTNEASTAEFE 309
Query: 443 PIT 451
T
Sbjct: 310 STT 312
>SB_17758| Best HMM Match : Transformer (HMM E-Value=0.35)
Length = 974
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = +2
Query: 287 DSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSES 466
D + T E ++ E L + + K K+ ++ GP+ + C KE + + P ++
Sbjct: 53 DEVYTLEEIT-AEPLPEAEAKEVKQKKKKKKKNKKGPESLNECRKEESELLKAVAPPEKN 111
Query: 467 HAESENDDVKPHPSK 511
A ++ V+ S+
Sbjct: 112 VASTDVSKVQEEESE 126
>SB_8915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 386 EPGPDLESSCSKESPVEYEPITPKSESHAESENDD 490
+ PD+E + S+ESP +P +SE E ++DD
Sbjct: 404 DDAPDVEGNGSQESP-SVQPPEMESEEEDEQDSDD 437
>SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)
Length = 1552
Score = 27.5 bits (58), Expect = 7.6
Identities = 22/104 (21%), Positives = 38/104 (36%)
Frame = +2
Query: 185 NDQTSKGDLQELGVERRSSGLSVDVGARPPAWPTDSISTPEVLSYVEQLEKEKCSHTTLK 364
N+Q +GD+ E + V P + I ++ + ++ E S ++
Sbjct: 1108 NEQEEQGDIPIEESEPNGPVIKVQSAENPD----EDIPLKDLDDEPDMMKDESSSAESVH 1163
Query: 365 SKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESENDDVK 496
EW P+ E E+ Y TPK AE ++ K
Sbjct: 1164 DLEWQEELDRPEEEHQGEDENSTSYRYPTPKIVYSAEESKENRK 1207
>SB_45736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = +2
Query: 287 DSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSES 466
D + T E ++ E L + + K K+ ++ GP+ + C KE + + P ++
Sbjct: 198 DEVYTLEEIT-AEPLPEAEAKEVKQKKKKKKKNKKGPESLNECRKEESELLKAVAPPEKN 256
Query: 467 HAESENDDVKPHPSK 511
A ++ V+ S+
Sbjct: 257 VASTDVSKVQEEESE 271
>SB_29835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 27.5 bits (58), Expect = 7.6
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 161 IISEYIVHNDQTSKGDLQELGVERRSSGLSVDVGARPPAW--PTD-SISTPEVLSYVEQL 331
++ + I+ ND T +L V+ LS+ V P W P+D I+T V+ Y +L
Sbjct: 451 LLEDAIIENDITQSVQRYQLAVQEAKVRLSLAVA--PGVWLMPSDLVINTQSVVGYNNKL 508
Query: 332 EK 337
+K
Sbjct: 509 QK 510
>SB_22869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 422 ESPV-EYEPITPKSESHAESENDDVKPHPSKR 514
++PV ++ P+ PK +SH+ + + K PS+R
Sbjct: 320 DAPVSQHVPVHPKVQSHSRHQTNSNKTEPSQR 351
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,912,680
Number of Sequences: 59808
Number of extensions: 315585
Number of successful extensions: 1182
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -