Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A04
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   1.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   2.9  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   5.0  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   6.6  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 299 TPEVLSY-VEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESH 469
           TP++L+   EQL+ +  ++ T  ++ ++A EP          E PV+      +SE H
Sbjct: 152 TPQLLNLDQEQLQTQTFTYVTSSNEAFAAPEPNYSEPHLVILEQPVDKFRFRYQSEMH 209


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 5    WLATKPIEVTNTHNTNYNKMYTHNTLPFIDQDDSFD 112
            WL+  P  +    N+NYN   T +    ID +D++D
Sbjct: 1039 WLSVLPTPIGAWQNSNYNYDGTDD----IDDEDTYD 1070


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = +2

Query: 317 YVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESENDDVK 496
           Y+ Q ++   S ++  S   S+        S  S  S V  +P   + E H    +DD K
Sbjct: 102 YLHQHQQSSSSSSSSSSSSMSSSSSS-SFSSPDSPLSLVMKKPYHDEDEDHEMKHDDDGK 160

Query: 497 P 499
           P
Sbjct: 161 P 161


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -2

Query: 264 APTSTDKPELRLSTPNSCKSPLLV*SLCTMYSEMIMSL 151
           +P +T  PE  L+ PNS     L  S+C     +++ L
Sbjct: 164 SPRTTTTPEPPLADPNSMHLFALTLSVCLCVGGLVVLL 201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,273
Number of Sequences: 2352
Number of extensions: 10731
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)