Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A02
         (477 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2WJX3 Cluster: Putative uncharacterized protein; n=1; ...    41   0.016
UniRef50_A2EYU1 Cluster: Putative uncharacterized protein; n=1; ...    34   1.9  
UniRef50_Q0UFH7 Cluster: Putative uncharacterized protein; n=1; ...    33   2.5  
UniRef50_A0BXG7 Cluster: Chromosome undetermined scaffold_134, w...    33   3.3  
UniRef50_P37754 Cluster: 6-phosphogluconate dehydrogenase, decar...    33   3.3  
UniRef50_UPI0000DADA87 Cluster: hypothetical protein RcanM_01000...    33   4.3  
UniRef50_A7S011 Cluster: Predicted protein; n=1; Nematostella ve...    32   5.7  
UniRef50_A0CG59 Cluster: Chromosome undetermined scaffold_178, w...    32   7.5  
UniRef50_Q8RH52 Cluster: Thermostable carboxypeptidase 1; n=2; F...    31   10.0 
UniRef50_A5P433 Cluster: Transcriptional regulator, LysR family ...    31   10.0 
UniRef50_Q9UTQ4 Cluster: NADH-dependent flavin oxidoreductase; n...    31   10.0 
UniRef50_Q2H7J9 Cluster: Predicted protein; n=1; Chaetomium glob...    31   10.0 

>UniRef50_A2WJX3 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 416

 Score = 40.7 bits (91), Expect = 0.016
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
 Frame = -2

Query: 350 STPISFLTCPQAVVPMKVMDSSIGCLTAATSFVILLLSWSMKLSPSAAALVIITAARTCS 171
           +T +SF+ C QAV    V    + CL+ ++SFV + +SW M   P      II    T  
Sbjct: 127 ATCVSFVNCSQAVRSNSVY-VPVDCLSTSSSFVYMFVSWMM---PPFEGFPIIENLETSC 182

Query: 170 TCVMLIGIMGRMQVQTPRCSFPFIVN--RYGFCDIFSLI 60
             + +I + GR        SF  IV   R GF   F LI
Sbjct: 183 RYLAMIPLGGRDSPLPHNASFSDIVRSMRNGFAVQFPLI 221


>UniRef50_A2EYU1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 121

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +1

Query: 232 DQLSRSITKEVAAVKQPIDESITFIGTTACGHVKKLIGVDYEQVKGVRE 378
           DQ   ++ KE A ++Q +D + + + TTA  H KKL     ++ K + E
Sbjct: 49  DQAGEAVNKERANIQQSMDNATSAMSTTALAHSKKLKRKAIKRAKKIEE 97


>UniRef50_Q0UFH7 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 774

 Score = 33.5 bits (73), Expect = 2.5
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -2

Query: 326 CPQAVVPMKVMDSSIGCLTAATSFVILLLS-WSMKLSPSAAALVIITAARTCSTCVMLIG 150
           CP  V    V D+S     A    V  +LS W  K S +   LV + AAR+C T V L+G
Sbjct: 347 CPSRVA---VRDASTEMTYAQLDMVSDVLSRWLYKRSLAPETLVGVFAARSCQTIVALLG 403

Query: 149 IM 144
           I+
Sbjct: 404 IL 405


>UniRef50_A0BXG7 Cluster: Chromosome undetermined scaffold_134,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_134,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 356

 Score = 33.1 bits (72), Expect = 3.3
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 271 VKQPIDESITFIGTTACGHVKKLIGVDYEQVKGVREPD-LNQLTLNF 408
           V Q ID+ I F+G  AC + K LIG+ +    G R P  L  L L+F
Sbjct: 197 VMQQIDQFINFVGLEACDYEKTLIGISH--YLGFRRPSYLALLYLSF 241


>UniRef50_P37754 Cluster: 6-phosphogluconate dehydrogenase,
           decarboxylating; n=292; Bacteria|Rep: 6-phosphogluconate
           dehydrogenase, decarboxylating - Escherichia coli
          Length = 468

 Score = 33.1 bits (72), Expect = 3.3
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +1

Query: 235 QLSRSITKEVAAVKQPIDESITFIGTTACGHVKKLI--GVDYEQVKGVRE 378
           +L   I K++AAV +  +  +T+IG    GH  K++  G++Y  ++ + E
Sbjct: 150 ELVAPILKQIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAE 199


>UniRef50_UPI0000DADA87 Cluster: hypothetical protein
           RcanM_01000433; n=1; Rickettsia canadensis str.
           McKiel|Rep: hypothetical protein RcanM_01000433 -
           Rickettsia canadensis str. McKiel
          Length = 526

 Score = 32.7 bits (71), Expect = 4.3
 Identities = 17/77 (22%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
 Frame = +1

Query: 217 GLNFIDQLSRSITKEVAAVKQPIDESITFI---GTTACGHVKKLIGVDYEQVKGVREPDL 387
           G+N   ++ ++I  +   +K+ I  ++  +   G  +   VKK +   Y+ +K   +P +
Sbjct: 233 GVNSFSEVKKTIDTKYKTIKESIKPTVDKVYDFGVNSFSEVKKTVDTKYKTIKESIKPTV 292

Query: 388 NQLTLNFFSTAFRLSFK 438
           +++   +F   F LSF+
Sbjct: 293 DKVYDFWFKFKFNLSFQ 309


>UniRef50_A7S011 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 288

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 272 TAATSFVILLLSWSMKLSPSAAALVIITAARTCSTCVMLIGI 147
           T A+  ++  LS    L+   + LVI+TA  TC  C++L G+
Sbjct: 79  TKASILILTALSLERYLTVCKSNLVIVTARNTCIICIVLWGV 120


>UniRef50_A0CG59 Cluster: Chromosome undetermined scaffold_178, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_178, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 2030

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 344  PISFLTCPQAVVPMKVMDSSIGCLTAATSFVILLLSWSMKLSPSAAALVIITAART-CST 168
            P +  TC Q V P K+  S + CL+    +     + S   + S+  L  +TA  T C +
Sbjct: 962  PTNLNTCQQCVSPCKLCSSDVACLSCQNGYYYTSSNNSC-TTCSSPCLTCLTAGNTNCQS 1020

Query: 167  CV 162
            C+
Sbjct: 1021 CM 1022


>UniRef50_Q8RH52 Cluster: Thermostable carboxypeptidase 1; n=2;
           Fusobacterium nucleatum|Rep: Thermostable
           carboxypeptidase 1 - Fusobacterium nucleatum subsp.
           nucleatum
          Length = 496

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 24/76 (31%), Positives = 36/76 (47%)
 Frame = +1

Query: 220 LNFIDQLSRSITKEVAAVKQPIDESITFIGTTACGHVKKLIGVDYEQVKGVREPDLNQLT 399
           L  I +  +S+ KE   +  P+DE I F       ++   +G D+E  KGV E   +  T
Sbjct: 181 LRKIQEKKKSL-KEEDKINVPVDEDIQF---KFAKYLADYVGFDFE--KGVVETSEHPFT 234

Query: 400 LNFFSTAFRLSFKHKR 447
           LN      RL+  +KR
Sbjct: 235 LNLNKNDVRLTTNNKR 250


>UniRef50_A5P433 Cluster: Transcriptional regulator, LysR family
           precursor; n=3; Methylobacterium|Rep: Transcriptional
           regulator, LysR family precursor - Methylobacterium sp.
           4-46
          Length = 323

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 19/72 (26%), Positives = 31/72 (43%)
 Frame = -1

Query: 315 RCPDEGDGLVDRLFDRSHLFRDTSAQLVDEIEPVSGRARHHHRREDLQHVRHVDRYNGTD 136
           R    G  L+ R  DR+H+ ++  A  VD    +S R + HH++  L    +V  +N   
Sbjct: 139 RAEAPGISLLLRSVDRAHILQEIDADRVDLAIDLSFRGQQHHKQRLLYRDSYVCLFNAAL 198

Query: 135 ASPNPAMQFPFY 100
               P +    Y
Sbjct: 199 VGLAPPISLDDY 210


>UniRef50_Q9UTQ4 Cluster: NADH-dependent flavin oxidoreductase; n=1;
           Schizosaccharomyces pombe|Rep: NADH-dependent flavin
           oxidoreductase - Schizosaccharomyces pombe (Fission
           yeast)
          Length = 244

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 24/89 (26%), Positives = 39/89 (43%)
 Frame = -2

Query: 464 DQLSCFRLCLNERRKAVEKKFSVS*LRSGSRTPLTCS*STPISFLTCPQAVVPMKVMDSS 285
           D ++ FRL +  RR A       S    G R  +T S  TP+S    P     +K+   +
Sbjct: 37  DNVNAFRLLM--RRFAQPVVIITSGFADGHRAGMTASSFTPVSLTPNPVISFNIKIPSRT 94

Query: 284 IGCLTAATSFVILLLSWSMKLSPSAAALV 198
              +  +   ++ LLS S+K     A+L+
Sbjct: 95  ANAIQQSNRVIVHLLSSSIKKHSEWASLL 123


>UniRef50_Q2H7J9 Cluster: Predicted protein; n=1; Chaetomium
           globosum|Rep: Predicted protein - Chaetomium globosum
           (Soil fungus)
          Length = 406

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -1

Query: 330 NVPTSRCPDEGDGLVDRLFDRSHLFRDTSAQLVDEIEPVSGRARHH--HRREDLQHVRHV 157
           +V  S CP E DG V ++FD  +   + S     E E VS  A  H  H    L H+  +
Sbjct: 148 SVDPSPCPQEPDGFVAKIFDPLYYSFECSV-AAHEAEDVSFNADVHYTHEAAALDHLERM 206

Query: 156 DRYNGTDASPNP 121
            R NG      P
Sbjct: 207 -RKNGRQGLSAP 217


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,879,175
Number of Sequences: 1657284
Number of extensions: 8634211
Number of successful extensions: 26880
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 26153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26861
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)