Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A02
(477 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32229| Best HMM Match : 7tm_1 (HMM E-Value=0) 32 0.21
SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34) 30 1.1
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 29 2.0
SB_48329| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_38663| Best HMM Match : ET (HMM E-Value=0.58) 28 4.5
SB_1307| Best HMM Match : Filament (HMM E-Value=0.13) 28 4.5
SB_57533| Best HMM Match : Vicilin_N (HMM E-Value=2.6) 27 6.0
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 27 6.0
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_520| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_27508| Best HMM Match : Cgr1 (HMM E-Value=1) 27 6.0
SB_14703| Best HMM Match : Borrelia_orfA (HMM E-Value=0.14) 27 6.0
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_30612| Best HMM Match : HSP9_HSP12 (HMM E-Value=6.7) 27 7.9
SB_24569| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_6692| Best HMM Match : WD40 (HMM E-Value=0.0056) 27 7.9
>SB_32229| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 389
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2
Query: 272 TAATSFVILLLSWSMKLSPSAAALVIITAARTCSTCVMLIGI 147
T A+ ++ LS L+ + LVI+TA TC C++L G+
Sbjct: 115 TKASILILTALSLERYLTVCKSNLVIVTARNTCIICIVLWGV 156
>SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34)
Length = 354
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 250 ITKEVAAVKQPIDESITFIGTTACGHVKKLI 342
+ KE+ A K+ DE +T IG++ +KK+I
Sbjct: 129 VPKEICAQKKTSDEMVTGIGSSETSRIKKII 159
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 70 KISQKPYLLTIKGKLHRGVWTCIRPIIPINMTHV--LQVLAAVMMTSAAADGLNFIDQLS 243
K+S PY+ +K + V C+ P+ HV ++V + ++D +
Sbjct: 169 KVSVTPYVDPVKYPVKVSVTPCVDPVKVSVTPHVDPVKVSVTPCVDPVKVAVTPYVDPVK 228
Query: 244 RSITKEVAAVKQPIDESIT 300
S+T V VK P+ ++T
Sbjct: 229 VSVTPYVDPVKYPVKVAVT 247
>SB_48329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 323 GTLKNLSASTTNRSKEYGNRISISSR*TFSQPLFVSRSNINESSLTD 463
GTL+ LS STTN + I + + T+ + L+V + I++++ T+
Sbjct: 255 GTLETLSLSTTNSPELENALIHLVTACTYLRQLYVFQCYISQNAKTE 301
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 51 LTNNQGKNITKTVSINYKRETASRGLDLHP 140
LT K++ TVS++ K +TA G+D P
Sbjct: 1772 LTRTGDKSVPHTVSLSIKNDTAYSGVDFTP 1801
>SB_38663| Best HMM Match : ET (HMM E-Value=0.58)
Length = 168
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 269 AATSFVILLLSWSMKLSPSAAALVIITAARTCSTCVMLIGIMG 141
A S V +L + LSP I+ +AR C+ C +L G+ G
Sbjct: 58 AEESTVCQILYLNSSLSPRYGLPGIVRSARYCTVCQVLYGLPG 100
>SB_1307| Best HMM Match : Filament (HMM E-Value=0.13)
Length = 916
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -1
Query: 312 CPDEGDGLVDRLFDRSHLFRDTSAQLVDEIEPVSGRARHHHRREDLQHVRH 160
C D+ DG + L+ ++ L D+S Q E ++GR H RRED H
Sbjct: 64 CHDDVDG--ECLY-KACLDTDSSCQHDTRREELAGRCHHDTRREDFASYSH 111
>SB_57533| Best HMM Match : Vicilin_N (HMM E-Value=2.6)
Length = 212
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 228 EIEPVSGRARHHHRREDLQHVRHVDRYNGTDASPNPAMQFP 106
E EP R R H RE+ HV++ +R T+ Q P
Sbjct: 102 EHEPELARVRESHSRENATHVKNEERKLDTEEGQVTVPQSP 142
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 228 EIEPVSGRARHHHRREDLQHVRHVDRYNGTDASPNPAMQFP 106
E EP R R H RE+ HV++ +R T+ Q P
Sbjct: 929 EHEPELARVRESHSRENATHVKNEERKLDTEEGQVTVPQSP 969
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 228 EIEPVSGRARHHHRREDLQHVRHVDRYNGTDASPNPAMQFP 106
E EP R R H RE+ HV++ +R T+ Q P
Sbjct: 490 EHEPELARVRESHSRENATHVKNEERKLDTEEGQVTVPQSP 530
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 325 HVKKLIGVDYEQ--VKGVREPDLNQLTLNFFSTAFRLSFKHKRK 450
HV++L+GV Y Q V V++ + +TL F L+F RK
Sbjct: 70 HVQRLLGVSYHQVSVSKVKKVTIAGITLVAIILFFSLTFHSARK 113
>SB_520| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 228 EIEPVSGRARHHHRREDLQHVRHVDRYNGTDASPNPAMQFP 106
E EP R R H RE+ HV++ +R T+ Q P
Sbjct: 184 EHEPELARVRESHSRENATHVKNEERKLDTEEGQVTVPQSP 224
>SB_27508| Best HMM Match : Cgr1 (HMM E-Value=1)
Length = 229
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 228 EIEPVSGRARHHHRREDLQHVRHVDRYNGTDASPNPAMQFP 106
E EP R R H RE+ HV++ +R T+ Q P
Sbjct: 175 EHEPELARVRESHSRENATHVKNEERKLDTEEGQVTVPQSP 215
>SB_14703| Best HMM Match : Borrelia_orfA (HMM E-Value=0.14)
Length = 558
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 228 EIEPVSGRARHHHRREDLQHVRHVDRYNGTDASPNPAMQFP 106
E EP R R H RE+ HV++ +R T+ Q P
Sbjct: 504 EHEPELARVRESHSRENATHVKNEERKLDTEEGQVTVPQSP 544
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 229 IDQLSRSITKEVAAVKQPIDESITFIGTTACGHVKKLIGVDYEQ--VKGVREPDLNQLTL 402
I ++ S+TK+ ++Q + + +I GH ++ G+ E +KG E ++ L
Sbjct: 58 IGSIASSVTKDYDELQQKLKDQQKYIADMEAGHAQEKEGLQLELDIMKGEHEMEITMLKK 117
Query: 403 NFFSTAFRL 429
+ RL
Sbjct: 118 EIQAERVRL 126
>SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 228 EIEPVSGRARHHHRREDLQHVRHVDRYNGTDASPNPAMQFP 106
E EP R R H RE+ HV++ +R T+ Q P
Sbjct: 925 EHEPELARVRESHSRENATHVKNEERKLDTEEGQVTVPQSP 965
>SB_30612| Best HMM Match : HSP9_HSP12 (HMM E-Value=6.7)
Length = 184
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 82 KPYLLTIKGKLHRGVWTCIRPIIPINMTHVLQVLAAVMMTSAAADGLNFIDQLSRSITKE 261
KP KG + R +C++P N QV AA+ + + +S+S+++
Sbjct: 77 KPQRSIDKGDIVRSSDSCLKPDARHNKQTQTQVRAAIYTPIQSIISQSVSQSVSQSVSQS 136
Query: 262 VA-AVKQPIDESIT 300
V+ +V Q + +S++
Sbjct: 137 VSQSVSQSVSQSLS 150
>SB_24569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1660
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -1
Query: 342 DKFFNVPTSRCPD--EGDGLVDRLFDRSHLFRDTSAQLVDEIEPVS 211
D F+V S+C D G VDRL D + L + + V + PVS
Sbjct: 107 DVGFDVTNSKCNDCPIGTTAVDRLIDGTKLSQRQCLKCVSDTSPVS 152
>SB_6692| Best HMM Match : WD40 (HMM E-Value=0.0056)
Length = 272
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 234 PAEQKYHERGGCGQTTYRRVHHLHRDN 314
P ++ Y E G CG+T+ + + RD+
Sbjct: 28 PMDEAYGEMGSCGETSIKETEGIIRDS 54
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,177,729
Number of Sequences: 59808
Number of extensions: 264260
Number of successful extensions: 918
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 989515521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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