Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_A02
         (477 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC024162-1|AAH24162.1|  612|Homo sapiens integrin alpha FG-GAP r...    30   3.6  
BC006321-1|AAH06321.2|  612|Homo sapiens integrin alpha FG-GAP r...    30   3.6  
AK027596-1|BAB55220.1|  612|Homo sapiens protein ( Homo sapiens ...    30   3.6  
AF503339-1|AAN31655.1|  612|Homo sapiens T-cell immunomodulatory...    30   3.6  
AF212247-1|AAG41782.1|  609|Homo sapiens CDA08 protein.                30   3.6  
BC151226-1|AAI51227.1| 1512|Homo sapiens zinc finger protein 608...    29   6.3  
BC038370-1|AAH38370.1|  240|Homo sapiens ZNF608 protein protein.       29   6.3  
AB033107-1|BAA86595.2| 1534|Homo sapiens KIAA1281 protein protein.     29   6.3  

>BC024162-1|AAH24162.1|  612|Homo sapiens integrin alpha FG-GAP
           repeat containing 1 protein.
          Length = 612

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 239 SWSMKLSPSAAALVIITAARTCSTCVMLIGIMGRMQVQ 126
           SWS KL  + + +V++TA      CV ++ I+G +  Q
Sbjct: 554 SWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQ 591


>BC006321-1|AAH06321.2|  612|Homo sapiens integrin alpha FG-GAP
           repeat containing 1 protein.
          Length = 612

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 239 SWSMKLSPSAAALVIITAARTCSTCVMLIGIMGRMQVQ 126
           SWS KL  + + +V++TA      CV ++ I+G +  Q
Sbjct: 554 SWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQ 591


>AK027596-1|BAB55220.1|  612|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14690 fis, clone NT2RP2005270. ).
          Length = 612

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 239 SWSMKLSPSAAALVIITAARTCSTCVMLIGIMGRMQVQ 126
           SWS KL  + + +V++TA      CV ++ I+G +  Q
Sbjct: 554 SWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQ 591


>AF503339-1|AAN31655.1|  612|Homo sapiens T-cell immunomodulatory
           protein protein.
          Length = 612

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 239 SWSMKLSPSAAALVIITAARTCSTCVMLIGIMGRMQVQ 126
           SWS KL  + + +V++TA      CV ++ I+G +  Q
Sbjct: 554 SWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQ 591


>AF212247-1|AAG41782.1|  609|Homo sapiens CDA08 protein.
          Length = 609

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 239 SWSMKLSPSAAALVIITAARTCSTCVMLIGIMGRMQVQ 126
           SWS KL  + + +V++TA      CV ++ I+G +  Q
Sbjct: 551 SWSAKLYLTPSNIVLLTAIALIGVCVFILAIIGILHWQ 588


>BC151226-1|AAI51227.1| 1512|Homo sapiens zinc finger protein 608
            protein.
          Length = 1512

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 22/95 (23%), Positives = 38/95 (40%)
 Frame = +3

Query: 21   GFRSSAFYVYLTNNQGKNITKTVSINYKRETASRGLDLHPSHYTDQHDARAASPXXXXXX 200
            GF    +       + + +  + S+N K  T S+ LDL   H  +Q+ +++ +P      
Sbjct: 1381 GFHYPVYGKMSGREETEKVNTSPSVNTKTTTESKALDLLQQH-ANQYRSKSPAP------ 1433

Query: 201  XXXXXXAQFHRPAEQKYHERGGCGQTTYRRVHHLH 305
                  A+  R AE++       GQ      HH H
Sbjct: 1434 -VEKATAEREREAERERDRHSPFGQRHLHTHHHTH 1467


>BC038370-1|AAH38370.1|  240|Homo sapiens ZNF608 protein protein.
          Length = 240

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 22/95 (23%), Positives = 38/95 (40%)
 Frame = +3

Query: 21  GFRSSAFYVYLTNNQGKNITKTVSINYKRETASRGLDLHPSHYTDQHDARAASPXXXXXX 200
           GF    +       + + +  + S+N K  T S+ LDL   H  +Q+ +++ +P      
Sbjct: 109 GFHYPVYGKMSGREETEKVNTSPSVNTKTTTESKALDLLQQH-ANQYRSKSPAP------ 161

Query: 201 XXXXXXAQFHRPAEQKYHERGGCGQTTYRRVHHLH 305
                 A+  R AE++       GQ      HH H
Sbjct: 162 -VEKATAEREREAERERDRHSPFGQRHLHTHHHTH 195


>AB033107-1|BAA86595.2| 1534|Homo sapiens KIAA1281 protein protein.
          Length = 1534

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 22/95 (23%), Positives = 38/95 (40%)
 Frame = +3

Query: 21   GFRSSAFYVYLTNNQGKNITKTVSINYKRETASRGLDLHPSHYTDQHDARAASPXXXXXX 200
            GF    +       + + +  + S+N K  T S+ LDL   H  +Q+ +++ +P      
Sbjct: 1403 GFHYPVYGKMSGREETEKVNTSPSVNTKTTTESKALDLLQQH-ANQYRSKSPAP------ 1455

Query: 201  XXXXXXAQFHRPAEQKYHERGGCGQTTYRRVHHLH 305
                  A+  R AE++       GQ      HH H
Sbjct: 1456 -VEKATAEREREAERERDRHSPFGQRHLHTHHHTH 1489


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,746,405
Number of Sequences: 237096
Number of extensions: 1228349
Number of successful extensions: 2792
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2789
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)