Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A02
(477 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53640.1 68416.m05925 protein kinase family protein contains ... 30 0.70
At2g14540.1 68415.m01628 serpin family protein / serine protease... 29 1.2
At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger) fa... 29 1.6
At3g06450.1 68416.m00746 anion exchange family protein similar t... 29 2.2
At3g57460.1 68416.m06397 expressed protein weak similarity to SP... 28 2.8
At1g68740.1 68414.m07857 EXS family protein / ERD1/XPR1/SYG1 fam... 28 3.8
At3g52240.1 68416.m05741 expressed protein 27 5.0
At2g47160.1 68415.m05889 anion exchange family protein contains ... 27 5.0
At3g62270.1 68416.m06996 anion exchange family protein contains ... 27 6.6
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 27 6.6
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 27 6.6
At1g13350.1 68414.m01550 protein kinase family protein contains ... 27 6.6
At4g18760.1 68417.m02772 leucine-rich repeat family protein cont... 27 8.7
At1g70070.1 68414.m08062 DEAD/DEAH box helicase, putative simila... 27 8.7
At1g66770.1 68414.m07590 nodulin MtN3 family protein contains Pf... 27 8.7
>At3g53640.1 68416.m05925 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 642
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = -1
Query: 285 DRLFDRSHLFRDTSAQLVDEIEPVSGRARHHHRREDLQHVRHVDRYNGTDASPNPAMQFP 106
D++ + SH S DE+ S R +HHH + +H H+D +G + + P + P
Sbjct: 4 DKIVESSHRKHRRSYSPSDEVVKSSKRHKHHHHKH--RHSHHLDE-DGNEKNVYPFLGNP 60
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 29.5 bits (63), Expect = 1.2
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 238 LSRSITKEVAAVKQPIDESITFIGTTACG-HVKKLIGVDYEQVKGVREPDLNQLTLNFFS 414
L S T+E A+ + + G+ G + + GV EQ PD L LNFF
Sbjct: 90 LKSSSTEETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCN-PDWEDLFLNFFK 148
Query: 415 TAF-RLSFKHKRKQL 456
+F ++ F+HK +++
Sbjct: 149 ASFAKVDFRHKAEEV 163
>At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 336
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -2
Query: 377 SRTPLTCS*STPISFLTCPQAVVPMKVMDSSIGCLTAATS--FVILLLSWSMKLSPS 213
S +P + S +FLTCP VV SI CL+ +TS F L++S L PS
Sbjct: 91 SGSPFSYGFSFYYTFLTCPNEVVIPVWSLMSIPCLSNSTSSFFATSNLTFSKLLPPS 147
>At3g06450.1 68416.m00746 anion exchange family protein similar to
putative Anion exchanger family members: GB:AAD39673,
GB:AAD55295 [Arabidopsis thaliana]
Length = 732
Score = 28.7 bits (61), Expect = 2.2
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 202 SAAADGLNFIDQLSRSITKEVAAVKQPIDESITFIGTTACGHVKKLIGVDYEQVKGVREP 381
++A + F +QL R ++ AV+ T + T CG + +IG + GV EP
Sbjct: 48 ASAIPVITFGEQLERDTDGKITAVQ-------TLVSTALCGVIHSIIGGQPLLILGVAEP 100
Query: 382 DLNQLTLNF 408
+ T F
Sbjct: 101 TVIMYTFMF 109
>At3g57460.1 68416.m06397 expressed protein weak similarity to
SP|O43847 Nardilysin precursor (EC 3.4.24.61)
(N-arginine dibasic convertase) {Homo sapiens}
Length = 356
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 310 TTACG-HVKKLIGVDYEQVKGVREPDLNQLTLNFFSTAFRLSFKHKRK 450
T AC H+K ++G+ + Q+K +++ ++Q + S F F ++ K
Sbjct: 95 TDACHEHMKDILGLLFRQIKLLQQSGVSQWIFDELSAIFEAEFHYQAK 142
>At1g68740.1 68414.m07857 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 784
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/83 (19%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 27 RSSAFYVYLTNNQGKNITKTVSINYKRETASRGLDLHPSHYTDQ--HDARAASPXXXXXX 200
+SS + + N+G+ ++ + ++ K ++ D++ + ++ D AA
Sbjct: 54 KSSLGRLSIFGNKGREQSRVIQVHKKLASSGSNNDVYETELLEKIADDTDAAKEFFACLD 113
Query: 201 XXXXXXAQFHRPAEQKYHERGGC 269
QF++ E+++ ERG C
Sbjct: 114 MQLNKVNQFYKTKEKEFLERGEC 136
>At3g52240.1 68416.m05741 expressed protein
Length = 680
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 21 GFRSSAFYVYLTNNQGKNITKTVSINYKRETASRGLDLHPS 143
G RS Y + ++GK+I+++ + Y + +S+G++ H S
Sbjct: 340 GSRSVEQDAYSSRDKGKHISESPTSEYSQPQSSKGINEHSS 380
>At2g47160.1 68415.m05889 anion exchange family protein contains
some similarity to SWISS-PROT:P04919 anion transport
protein (anion exchange protein 1) [Mouse] {Mus
musculus}
Length = 704
Score = 27.5 bits (58), Expect = 5.0
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 202 SAAADGLNFIDQLSRSITKEVAAVKQPIDESITFIGTTACGHVKKLIGVDYEQVKGVREP 381
++A ++F +QL RS + AV+ T T CG + +IG + GV EP
Sbjct: 46 ASAIPVISFGEQLERSTDGVLTAVQ-------TLASTAICGMIHSIIGGQPLLILGVAEP 98
Query: 382 DLNQLTLNF 408
+ T F
Sbjct: 99 TVIMYTFMF 107
>At3g62270.1 68416.m06996 anion exchange family protein contains
similarity to anion exchanger 3, cardiac splice form -
Rattus norvegicus, PIR:A42497
Length = 703
Score = 27.1 bits (57), Expect = 6.6
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 202 SAAADGLNFIDQLSRSITKEVAAVKQPIDESITFIGTTACGHVKKLIGVDYEQVKGVREP 381
++A ++F +QL RS + AV+ T T CG + +IG + GV EP
Sbjct: 46 ASAIPVISFGEQLERSTDGVLTAVQ-------TLASTAICGIIHSIIGGQPLLILGVAEP 98
Query: 382 DLNQLTLNF 408
+ T F
Sbjct: 99 TVIMYTFMF 107
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 6 LPIQFGFRSSAFYVYLTNNQGKNITKTVSINYKRETASRGLDLHPSHYT 152
LP+ + +S A Y T++ KN+++ +S + +A + +D HP T
Sbjct: 327 LPVTYPGQSHAHATYSTDDLPKNVSRILS----QGSAIKSMDFHPVQQT 371
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 6 LPIQFGFRSSAFYVYLTNNQGKNITKTVSINYKRETASRGLDLHPSHYT 152
LP+ + +S A Y T++ KN+++ +S + +A + +D HP T
Sbjct: 327 LPVTYPGQSHAHATYSTDDLPKNVSRILS----QGSAIKSMDFHPVQQT 371
>At1g13350.1 68414.m01550 protein kinase family protein contains
protein kinase domain, Pfam:PF00069 (likely that this
cDNA contains a single unspliced intron. Putative intron
removed in this gene model.)
Length = 761
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -1
Query: 285 DRLFDRSHLFRDTSAQLVDEI--EPVSGRARHHHRREDLQHVRHVD-RYN 145
D+ + +H S DE+ P ++RHHHRR +H R + +YN
Sbjct: 4 DKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYN 53
>At4g18760.1 68417.m02772 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 431
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 347 TPISFLTCPQAVVPMKVMDSSIGCLTAATSFV 252
T +SFL CP P ++ D S+ TA +SF+
Sbjct: 120 TSLSFLNCPSLSPPPRLPD-SLHSFTAVSSFL 150
>At1g70070.1 68414.m08062 DEAD/DEAH box helicase, putative similar
to SP|P35207 Antiviral protein SKI2 {Saccharomyces
cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 1171
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 3 PLPIQFGFRSSAFYVYLTNNQGKNITKTVSINYKRETAS 119
P+P+ + F + + L + +G N+ + +S+NY + +AS
Sbjct: 335 PVPLTWYFSTKHSLLPLLDEKGINVNRKLSLNYLQLSAS 373
>At1g66770.1 68414.m07590 nodulin MtN3 family protein contains Pfam
PF03083 MtN3/saliva family; similar to LIM7 (cDNAs
induced in meiotic prophase in lily microsporocytes)
GI:431154 from [Lilium longiflorum]
Length = 261
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 58 IIKEK-ISQKPYLLTIKGKLHRGVWT 132
+IK K + P+LL++ G L+ GVWT
Sbjct: 159 VIKTKSLEFMPFLLSVVGFLNAGVWT 184
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,884,843
Number of Sequences: 28952
Number of extensions: 189939
Number of successful extensions: 575
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 821630280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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