Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A01
(182 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 85 9e-18
SB_8025| Best HMM Match : MNSV_P7B (HMM E-Value=3.8) 29 0.80
SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086) 27 1.8
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 27 2.4
SB_8305| Best HMM Match : Plasmodium_HRP (HMM E-Value=8.8) 27 3.2
SB_51364| Best HMM Match : DUF1431 (HMM E-Value=5.9) 27 3.2
SB_24520| Best HMM Match : CFEM (HMM E-Value=1.2) 27 3.2
SB_7996| Best HMM Match : efhand (HMM E-Value=1.4) 27 3.2
SB_13178| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 26 4.2
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 26 4.2
SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_21841| Best HMM Match : WD40 (HMM E-Value=0.00078) 26 4.2
SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38) 26 4.2
SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055) 26 5.6
SB_52009| Best HMM Match : Plasmodium_HRP (HMM E-Value=7.9) 26 5.6
SB_31316| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_25692| Best HMM Match : I-set (HMM E-Value=2e-20) 26 5.6
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_10606| Best HMM Match : I-set (HMM E-Value=0) 26 5.6
SB_35562| Best HMM Match : MAM (HMM E-Value=6.4e-20) 25 7.4
SB_29994| Best HMM Match : Ank (HMM E-Value=0) 25 7.4
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 25 7.4
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 25 7.4
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.4
SB_56399| Best HMM Match : DUF23 (HMM E-Value=1.9e-28) 25 9.8
SB_25293| Best HMM Match : DUF1665 (HMM E-Value=0.098) 25 9.8
SB_58258| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05) 25 9.8
SB_45633| Best HMM Match : DUF23 (HMM E-Value=3.2e-35) 25 9.8
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 25 9.8
SB_14540| Best HMM Match : rve (HMM E-Value=2.4e-10) 25 9.8
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 85.0 bits (201), Expect = 9e-18
Identities = 33/39 (84%), Positives = 37/39 (94%)
Frame = +3
Query: 66 RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLR 182
RGGGTHRSGQGAFGNMCRGGRMFAPTK WR+WH +VN++
Sbjct: 77 RGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWHTKVNVQ 115
Score = 47.2 bits (107), Expect = 2e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 2 GHQTSAESWGTGRAVARIPR 61
GHQTSAESWGTGRAVARIPR
Sbjct: 56 GHQTSAESWGTGRAVARIPR 75
>SB_8025| Best HMM Match : MNSV_P7B (HMM E-Value=3.8)
Length = 119
Score = 28.7 bits (61), Expect = 0.80
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Frame = -2
Query: 163 CQRLHGLVGANIRPPRHMLPNAPCPDLWVP------PPRTAGNTGY 44
C+ +HG V +RPP C D+ V PP + G GY
Sbjct: 44 CKDVHGQVNGTVRPPYSRGGKGYCKDVHVQINGTVRPPHSRGGKGY 89
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = -2
Query: 163 CQRLHGLVGANIRPPRHMLPNAPCPDL------WVPPPRTAGNTGY 44
C+ +H + +RPP C D+ V PP + G GY
Sbjct: 67 CKDVHVQINGTVRPPHSRGGKGYCKDVHGQINGTVRPPHSRGGKGY 112
>SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086)
Length = 627
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 172 TRRCQRLHGLVGANIR--PPRHMLPNAPCPDLWVPPP 68
+R +HGL +I PPRH P P P PPP
Sbjct: 138 SRHTVEVHGLAHPSITQPPPRHSPPQTPVPP---PPP 171
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 182 P*VHATVPAPPRLGRREHTSAAAHVTECTLPRSVGTTTTNS 60
P V AT+ APP L +S + T C P + TTT+++
Sbjct: 582 PPVAATLSAPPPLDSTSGSSTISSATICFGPTNRCTTTSST 622
>SB_8305| Best HMM Match : Plasmodium_HRP (HMM E-Value=8.8)
Length = 366
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 118 RHMLPNAPC-PDLWVPPPRTAGNTGYST 38
+HM PN PC P ++ P T T ++T
Sbjct: 14 KHMQPNNPCNPTTYIQPKDTYNQTTHTT 41
>SB_51364| Best HMM Match : DUF1431 (HMM E-Value=5.9)
Length = 364
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -1
Query: 152 PRLGRREHTSAAAHVTECTLPRSVGTTTTNS 60
P +GR ++TSA ++TE + +S+ T ++ S
Sbjct: 215 PGIGRYDYTSARRNITEYSPSQSINTESSPS 245
>SB_24520| Best HMM Match : CFEM (HMM E-Value=1.2)
Length = 813
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 137 REHTSAAAHVTECTLPRSVGTTTTNSGEYGLQHDRYP 27
R++ A AH T+ P T + Y Q D YP
Sbjct: 50 RDYPCACAHDTDTDQPSDPCQRTADQNPYPTQRDHYP 86
>SB_7996| Best HMM Match : efhand (HMM E-Value=1.4)
Length = 570
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 146 LGRREHTSAAAHVTECTLPRSVGTTTTNSGEYGLQHDRYPKTRRWFD 6
L R+ T VT +L + T N+ + HD +PKT W D
Sbjct: 261 LQRQLETHYGNRVTIISLKQPPLIVTLNNNVNKIIHDAHPKTESWKD 307
>SB_13178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 130 IRPPRHMLPNAPCPDLWVPPPRTAGNTG 47
+ PP M P P P+ PPP T G
Sbjct: 115 VYPPPSMAPYPPGPNQGTPPPSTQQQPG 142
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 72 GGTHRSGQGAFGNMCRGG 125
GG +RSG G +G RGG
Sbjct: 189 GGGYRSGGGGYGGSSRGG 206
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 26.2 bits (55), Expect = 4.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 107 TECTLPRSVGTTTTNSGEYGLQHD 36
T+ T+P++ T T S +Y + HD
Sbjct: 938 TQRTMPQTTRTRTQQSADYAINHD 961
>SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1
Query: 146 LGRREHTSAAAHVTECTLPRSVGTTTTNSGEY 51
L R S+ H T C TTN G+Y
Sbjct: 16 LSRGARNSSIRHATRCFCNARANAVTTNDGDY 47
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 72 GGTHRSGQGAFGNMCRGG 125
GG +RSG G +G RGG
Sbjct: 98 GGGYRSGGGGYGGSSRGG 115
>SB_21841| Best HMM Match : WD40 (HMM E-Value=0.00078)
Length = 360
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 165 GASASTAWSARTYVRRGTCY 106
G SA+TA A + RRG CY
Sbjct: 178 GTSANTAIKAIEFARRGRCY 197
>SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38)
Length = 501
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 121 PRHMLPNAPCPDLWVPPPRTAGNTGYSTTGTPR 23
P+ LP A CP P + G T TTGTPR
Sbjct: 304 PKLALP-AQCPATCRPTRSSQGLTTPKTTGTPR 335
>SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055)
Length = 685
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 181 RRFTRRCQRLHGLVGANIRPPRHM 110
R TRRC H + N+ PRH+
Sbjct: 354 RTQTRRCTYTHPVTQINVHAPRHV 377
>SB_52009| Best HMM Match : Plasmodium_HRP (HMM E-Value=7.9)
Length = 231
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 181 RRFTRRCQRLHGLVGANIRPPRHM 110
R TRRC H + N+ PRH+
Sbjct: 129 RTQTRRCTYTHPVTQINVHAPRHV 152
>SB_31316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 49 PYSPLFVVVVPTDLGRVHSVTCAAADVCSR 138
PY P+ ++PTD G +++T DV SR
Sbjct: 216 PYPPVGPAILPTDCGYKYALT--VVDVASR 243
>SB_25692| Best HMM Match : I-set (HMM E-Value=2e-20)
Length = 104
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 157 RLHGLVGANIRPPRHMLPNAPCPDLWVPPP 68
R+HG +G NI L CP VP P
Sbjct: 15 RVHGTIGDNITALTDTLVTLHCPVTGVPAP 44
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 124 PPRHMLPNAPCPDLWVPPPRTAGNTGY 44
PP PN P P+ PPP A N Y
Sbjct: 196 PPPPNAPNPPPPNPPYPPPPNAPNPPY 222
>SB_10606| Best HMM Match : I-set (HMM E-Value=0)
Length = 872
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 157 RLHGLVGANIRPPRHMLPNAPCPDLWVPPP 68
R+HG +G NI L CP VP P
Sbjct: 673 RVHGTIGDNITALTDTLVTLHCPVTGVPAP 702
>SB_35562| Best HMM Match : MAM (HMM E-Value=6.4e-20)
Length = 256
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 136 ANIRPPRHMLPNAPCPDLWVPPPRTAG 56
A+ +PP PN P P + PPP T G
Sbjct: 228 ASPKPPTAP-PNTPPPPVTPPPPNTPG 253
>SB_29994| Best HMM Match : Ank (HMM E-Value=0)
Length = 407
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 43 CSPYSPLFVVVVPTDLGRVHSVTCAAADVCSR 138
C+P+SPL + V L V+ + A ADV R
Sbjct: 192 CAPWSPLHIAVQKGHLDCVNVLLDAGADVHCR 223
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 154 LHGLVGANIRPPRHMLPNAPCPDLWVPPP 68
L G +RPPRH+ +P P PPP
Sbjct: 318 LAAFAGPTLRPPRHLPWQSPPPP---PPP 343
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 129 YVRRGTCYRMHPAQICGYHHHEQR 58
YVR +R+HP +HH+ R
Sbjct: 249 YVRERHLFRLHPPPPSPHHHYHDR 272
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 155 PPRLGRREHTSAAAHVTECTLPRSVGT 75
PP G+ A AH TECT R G+
Sbjct: 219 PPGTGKTLLARAVAHHTECTFIRVSGS 245
>SB_56399| Best HMM Match : DUF23 (HMM E-Value=1.9e-28)
Length = 419
Score = 25.0 bits (52), Expect = 9.8
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -1
Query: 167 TVPAPPRLGRREHTSA--AAHVTECTLPRSVGTT 72
T PA +L REH AA + CT PR +G T
Sbjct: 122 TEPASYKL-IREHKKRRHAAFIATCTAPRGIGRT 154
>SB_25293| Best HMM Match : DUF1665 (HMM E-Value=0.098)
Length = 1450
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 126 RMFAPTKPWRRWHRRVNLR 182
+M + +RRWH+RV LR
Sbjct: 356 QMLLKARIFRRWHQRVRLR 374
>SB_58258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 751
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 164 VPAPPRLGRREHTSAAAHVTECTL 93
VP P R GR T+ HVT+ T+
Sbjct: 475 VPDPGRTGRPMDTTKRRHVTQTTI 498
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 25.0 bits (52), Expect = 9.8
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +1
Query: 4 SSNQRRVLGYRSCCSPYSPLFVVVVPTDLGRVHSVTCAAADVCSRRPSRGGAGTVA 171
S+ Q+R + R CC +SP V +L + H V A + + G T A
Sbjct: 87 SAIQQRAI--RPCCQEFSPSHVCYNQLNLTKNHYVLSARDVIAQAQSGTGKTATFA 140
>SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05)
Length = 755
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 148 GLVGANIRPPRHMLPNAPCPDLWVPPPRTAGNTGYSTTGTPR 23
GL N+ PCP WVP + +T ST T R
Sbjct: 266 GLTRPNVTEVSRYCNEIPCPPEWVPLAWSECSTTCSTGVTTR 307
>SB_45633| Best HMM Match : DUF23 (HMM E-Value=3.2e-35)
Length = 334
Score = 25.0 bits (52), Expect = 9.8
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -1
Query: 167 TVPAPPRLGRREHTSA--AAHVTECTLPRSVGTT 72
T PA +L REH AA + CT PR +G T
Sbjct: 23 TEPASYKL-IREHKKRRHAAFIATCTAPRGIGRT 55
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 66 RGGGTHRSGQGAFGNMCRGG 125
RGGG +R G G + RGG
Sbjct: 149 RGGGGYRGGGGGYRGRGRGG 168
>SB_14540| Best HMM Match : rve (HMM E-Value=2.4e-10)
Length = 257
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 19 RVLGYRSCCSPYSPLFVVVVPTDLGRVHSVTCAAADVCSR 138
R + Y PY P+ +PTD G +++T DV SR
Sbjct: 16 RPIYYARDTKPYPPVGSAFLPTDRGYKYALT--VVDVASR 53
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 25.0 bits (52), Expect = 9.8
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = -3
Query: 180 VGSRDGASASTAWSARTYVRRGTCYRMHPAQICG---YHHHEQRGIRATARPV 31
V + D A + + + VR GTC R P CG H +Q+ + + P+
Sbjct: 1835 VCTMDSAGCQKSMNLKV-VRNGTCVRKEPKNPCGNIKCTHKQQQCVVRSGEPM 1886
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,509,655
Number of Sequences: 59808
Number of extensions: 152846
Number of successful extensions: 636
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 16,821,457
effective HSP length: 39
effective length of database: 14,488,945
effective search space used: 304267845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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