Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_A01
(182 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal pro... 79 4e-16
Z81463-7|CAE17701.1| 172|Caenorhabditis elegans Hypothetical pr... 27 1.3
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 27 1.3
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 27 1.3
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 27 2.3
U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z74043-2|CAA98545.1| 243|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 25 5.4
U97401-1|AAB52466.2| 336|Caenorhabditis elegans Hypothetical pr... 25 5.4
U80451-3|AAB37838.1| 71|Caenorhabditis elegans Hypothetical pr... 25 5.4
U50192-2|AAA91245.1| 71|Caenorhabditis elegans Hypothetical pr... 25 5.4
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 25 5.4
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 25 5.4
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 25 5.4
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 25 5.4
AF039047-5|AAY86265.1| 188|Caenorhabditis elegans Hypothetical ... 25 5.4
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z66497-11|CAH19102.1| 238|Caenorhabditis elegans Hypothetical p... 25 7.1
Z66497-10|CAH19101.1| 346|Caenorhabditis elegans Hypothetical p... 25 7.1
Z66497-3|CAE48503.1| 363|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z66497-2|CAD59153.1| 336|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z66497-1|CAA91283.1| 521|Caenorhabditis elegans Hypothetical pr... 25 7.1
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 25 7.1
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 25 7.1
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 25 7.1
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 25 7.1
AL032652-2|CAB63397.2| 322|Caenorhabditis elegans Hypothetical ... 25 7.1
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 25 7.1
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 25 7.1
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 25 7.1
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 25 7.1
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 25 7.1
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 25 7.1
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 25 7.1
AF036688-6|AAB88312.1| 71|Caenorhabditis elegans Hypothetical ... 25 7.1
AC087232-2|AAK09076.4| 401|Caenorhabditis elegans Hypothetical ... 25 7.1
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical pr... 25 9.4
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 25 9.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 25 9.4
>AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 4 protein.
Length = 345
Score = 79.0 bits (186), Expect = 4e-16
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +3
Query: 66 RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNL 179
RGGGTHRSGQGAFGNMCRGG MFAP K +RRWHR VN+
Sbjct: 79 RGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNI 116
Score = 40.7 bits (91), Expect = 1e-04
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2
Query: 2 GHQTSAESWGTGRAVARIPR 61
G Q SAESWGTGRAVARIPR
Sbjct: 58 GKQHSAESWGTGRAVARIPR 77
>Z81463-7|CAE17701.1| 172|Caenorhabditis elegans Hypothetical
protein C06B8.11 protein.
Length = 172
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 125 SAAAHVTECTLPRSVGTTTTNSGEYGLQHDRYPK 24
S +A++ C LP +GTT TN + L++ PK
Sbjct: 12 SVSANLKICDLPLDLGTTPTNGTKKELRYHFDPK 45
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 148 GLVGANIRPPRHMLPNAPCPDLWVPPPRTAG 56
G+ GA PP P AP P +++PPP G
Sbjct: 154 GMPGAY--PPPRGYPPAPAPGVYMPPPGMPG 182
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 148 GLVGANIRPPRHMLPNAPCPDLWVPPPRTAG 56
G+ GA PP P AP P +++PPP G
Sbjct: 154 GMPGAY--PPPRGYPPAPAPGVYMPPPGMPG 182
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -1
Query: 104 ECTLPRSVGTTTTNSGEYGLQ---HDRYPKTRRWFD 6
E TLP S+G T N G + ++ + R WFD
Sbjct: 1654 ELTLPTSIGNTIINDGNPRINTTGMEKSDEARAWFD 1689
>U23147-2|AAC46688.1| 918|Caenorhabditis elegans Hypothetical
protein C18H9.3 protein.
Length = 918
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -2
Query: 133 NIRPPRHMLPNAPCPDLWVP--PPRTAGNTGYSTTGTP 26
+I PPR +LP+ P P P P G +S+ G P
Sbjct: 442 DIEPPRPILPSIPYPSATNPLYPAAFGGVNMWSSMGQP 479
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 155 PPRLGRREHTSAAAHVTECTLPRSVGT 75
PP G+ A AH TECT R G+
Sbjct: 201 PPGTGKTLLARAVAHHTECTFIRVSGS 227
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 98 TLPRSVGTTTTNSGEYGLQHDRYPKTRRWFD 6
T R + T TT++G +++D +T+RWF+
Sbjct: 18 TQARVLSTGTTDNGT--IRYDEVDETKRWFN 46
>Z74043-2|CAA98545.1| 243|Caenorhabditis elegans Hypothetical
protein T19B10.4a protein.
Length = 243
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 69 GGGTHRSGQGAFGNMCRGGRMFAPTKP 149
G + GQGA GN G + FA +P
Sbjct: 122 GPSANNVGQGAIGNNMNGAQPFAGPEP 148
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 69 GGGTHRSGQGAFGNMCRGGR 128
GGG R G G F RGGR
Sbjct: 58 GGGRGRGGDGGFRRNDRGGR 77
>U97401-1|AAB52466.2| 336|Caenorhabditis elegans Hypothetical
protein F21A9.2 protein.
Length = 336
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 87 ICGYHHHEQRGIRATARPVPQDSAL 13
+CGY RGIR R D AL
Sbjct: 302 VCGYRAFSMRGIRTHMRSHSDDEAL 326
>U80451-3|AAB37838.1| 71|Caenorhabditis elegans Hypothetical
protein F11G11.8 protein.
Length = 71
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 69 GGGTHRSGQGAFGNMCRGGRMF 134
GGG + QG+ GN GG++F
Sbjct: 38 GGGQQQQNQGSGGNTNPGGQVF 59
>U50192-2|AAA91245.1| 71|Caenorhabditis elegans Hypothetical
protein T23B7.1 protein.
Length = 71
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 69 GGGTHRSGQGAFGNMCRGGRMF 134
GGG + QG+ GN GG++F
Sbjct: 38 GGGQQQQNQGSGGNTNPGGQVF 59
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 96 PAQICGYHHHEQRGIRATARPVPQDS 19
P GY+HH+Q+ PVP+++
Sbjct: 108 PPPQSGYYHHQQQQHSGPTTPVPRNA 133
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 25.4 bits (53), Expect = 5.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 167 TVPAPPRLGRREHTSAAAHVTECTLPRSVGTTTTNSGEYGL 45
T PAP G T+A + ++P TTTT S GL
Sbjct: 50 TAPAPASAGLFGSTTAPTPASTSSVPLFGSTTTTASPSGGL 90
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 155 PPRLGRREHTSAAAHVTECTLPRSVGT 75
PP G+ A AH TECT R G+
Sbjct: 196 PPGTGKTLLARAVAHHTECTFIRVSGS 222
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 155 PPRLGRREHTSAAAHVTECTLPRSVGT 75
PP G+ A AH TECT R G+
Sbjct: 217 PPGTGKTLLARAVAHHTECTFIRVSGS 243
>AF039047-5|AAY86265.1| 188|Caenorhabditis elegans Hypothetical
protein K11D12.13 protein.
Length = 188
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 113 HVTECTLPRSVGTTTTNSGEYGLQHDRYPKT 21
H +C LP++ GT++ S E +++ PKT
Sbjct: 18 HPPKCYLPQAKGTSSNCSYEASIRYHFDPKT 48
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 136 ANIRPPRHMLPNAPCPDLWV-PPPRTAGNTGYSTTGTPRLGAGLMT 2
AN+ P +P +P P+L P P + T +TT + + AG T
Sbjct: 636 ANLPFPPPPMPPSPPPELTTKPKPSESPTTLQTTTESEKAAAGSFT 681
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 136 ANIRPPRHMLPNAPCPDLWV-PPPRTAGNTGYSTTGTPRLGAGLMT 2
AN+ P +P +P P+L P P + T +TT + + AG T
Sbjct: 636 ANLPFPPPPMPPSPPPELTTKPKPSESPTTLQTTTESEKAAAGSFT 681
>Z66497-11|CAH19102.1| 238|Caenorhabditis elegans Hypothetical
protein K08F8.1e protein.
Length = 238
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 127 RPPRHMLPNAPCPDLWVPPPRTAGNTGY 44
RP R++L +PC + PP G Y
Sbjct: 135 RPERNVLMESPCCTPFYAPPEVLGRERY 162
>Z66497-10|CAH19101.1| 346|Caenorhabditis elegans Hypothetical
protein K08F8.1d protein.
Length = 346
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 127 RPPRHMLPNAPCPDLWVPPPRTAGNTGY 44
RP R++L +PC + PP G Y
Sbjct: 243 RPERNVLMESPCCTPFYAPPEVLGRERY 270
>Z66497-3|CAE48503.1| 363|Caenorhabditis elegans Hypothetical
protein K08F8.1c protein.
Length = 363
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 127 RPPRHMLPNAPCPDLWVPPPRTAGNTGY 44
RP R++L +PC + PP G Y
Sbjct: 135 RPERNVLMESPCCTPFYAPPEVLGRERY 162
>Z66497-2|CAD59153.1| 336|Caenorhabditis elegans Hypothetical
protein K08F8.1b protein.
Length = 336
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 127 RPPRHMLPNAPCPDLWVPPPRTAGNTGY 44
RP R++L +PC + PP G Y
Sbjct: 293 RPERNVLMESPCCTPFYAPPEVLGRERY 320
>Z66497-1|CAA91283.1| 521|Caenorhabditis elegans Hypothetical
protein K08F8.1a protein.
Length = 521
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 127 RPPRHMLPNAPCPDLWVPPPRTAGNTGY 44
RP R++L +PC + PP G Y
Sbjct: 293 RPERNVLMESPCCTPFYAPPEVLGRERY 320
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 66 RGG-GTHRSGQGAFGNMCRGGR 128
RGG G R G+G +G RGGR
Sbjct: 688 RGGYGGDRGGRGGYGGGDRGGR 709
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 66 RGG-GTHRSGQGAFGNMCRGGR 128
RGG G R G+G +G RGGR
Sbjct: 729 RGGYGGDRGGRGGYGGGDRGGR 750
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 69 GGGTHRSGQGAFGNMCRGGRMFAP 140
GGG R G G+ M RGGR+ P
Sbjct: 2157 GGGGGRGGYGSTLVMPRGGRVVRP 2180
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 69 GGGTHRSGQGAFGNMCRGGRMFAP 140
GGG R G G+ M RGGR+ P
Sbjct: 2157 GGGGGRGGYGSTLVMPRGGRVVRP 2180
>AL032652-2|CAB63397.2| 322|Caenorhabditis elegans Hypothetical
protein Y63D3A.3 protein.
Length = 322
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 109 LPNAPCPDLWVPP 71
+PN P P LW+PP
Sbjct: 1 MPNYPFPILWLPP 13
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 136 ANIRPPRHMLPNAPCPDLWV-PPPRTAGNTGYSTTGTPRLGAGLMT 2
AN+ P +P +P P+L P P + T +TT + + AG T
Sbjct: 636 ANLPFPPPPMPPSPPPELTTKPKPSESPTTLQTTTESEKAAAGSFT 681
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 136 ANIRPPRHMLPNAPCPDLWV-PPPRTAGNTGYSTTGTPRLGAGLMT 2
AN+ P +P +P P+L P P + T +TT + + AG T
Sbjct: 636 ANLPFPPPPMPPSPPPELTTKPKPSESPTTLQTTTESEKAAAGSFT 681
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 66 RGGGTHRSGQGAFGNMCRGG 125
RGGG R G+G FG RGG
Sbjct: 33 RGGG-FRGGRGGFGGGGRGG 51
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 66 RGG-GTHRSGQGAFGNMCRGGR 128
RGG G R G+G +G RGGR
Sbjct: 688 RGGYGGDRGGRGGYGGGDRGGR 709
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 125 SAAAHVTECTLPRSVGTTTTNSGEYGLQH 39
SAA + E LPR VG +G G H
Sbjct: 242 SAAKQINEMVLPRGVGGVVGAAGAVGGAH 270
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 125 SAAAHVTECTLPRSVGTTTTNSGEYGLQH 39
SAA + E LPR VG +G G H
Sbjct: 508 SAAKQINEMVLPRGVGGVVGAAGAVGGAH 536
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 125 SAAAHVTECTLPRSVGTTTTNSGEYGLQH 39
SAA + E LPR VG +G G H
Sbjct: 508 SAAKQINEMVLPRGVGGVVGAAGAVGGAH 536
>AF036688-6|AAB88312.1| 71|Caenorhabditis elegans Hypothetical
protein C24D10.7 protein.
Length = 71
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 69 GGGTHRSGQGAFGNMCRGGRMF 134
GGG + QG+ GN GG++F
Sbjct: 38 GGGGQQQNQGSGGNTNPGGQVF 59
>AC087232-2|AAK09076.4| 401|Caenorhabditis elegans Hypothetical
protein Y92H12BR.6 protein.
Length = 401
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 88 DLWVPPPRTAGNTGYSTTGTPRLGAGLMT 2
++ PPP GN Y+TTG R G +T
Sbjct: 19 EITCPPPGNCGNGIYATTGF-RTGKAFIT 46
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 24.6 bits (51), Expect = 9.4
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -2
Query: 181 RRFTRRCQRLHGLVGANIRPPRHMLPNAPCPDLWVPPPRTAGNTGYSTTGTPRLGAGLMT 2
+RF L+ + +I PP +M P P D V RT G G RL L T
Sbjct: 219 QRFESPQASLNSMGPMDIGPPGYMQPLDPAIDEVVTNLRTKGAYGLGVDDVKRLQNILQT 278
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 24.6 bits (51), Expect = 9.4
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -2
Query: 181 RRFTRRCQRLHGLVGANIRPPRHMLPNAPCPDLWVPPPRTAGNTGYSTTGTPRLGAGLMT 2
+RF L+ + +I PP +M P P D V RT G G RL L T
Sbjct: 219 QRFESPQASLNSMGPMDIGPPGYMQPLDPAIDEVVTNLRTKGAYGLGVDDVKRLQNILQT 278
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 24.6 bits (51), Expect = 9.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 65 SWWWYPQIWAGCI 103
+WW YP WA I
Sbjct: 116 AWWIYPNAWASII 128
>Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical
protein K02C4.5 protein.
Length = 422
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 133 NIRPPRHMLPNAPCPDLWVPPPRT 62
NIRPP P PD PPP+T
Sbjct: 312 NIRPPIAQKPKLIQPDT-TPPPKT 334
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 69 GGGTHRSGQGAFGNMCRGG 125
GGG S Q A GN C GG
Sbjct: 31 GGGCCSSAQPACGNPCGGG 49
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2
Query: 124 PPRHMLPNAPCPDLWVPPPRTAGNTGYSTTGTPR 23
PP P+ P P PPP A ++ Y PR
Sbjct: 133 PPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPR 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,198,643
Number of Sequences: 27780
Number of extensions: 100061
Number of successful extensions: 445
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 41
effective length of database: 11,601,218
effective search space used: 220423142
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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