Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_P24
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   1.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   1.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   1.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   7.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   9.8  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -3

Query: 181 LISAIASVICFSTTSNKVTWYPTEANNIAHDLPI 80
           L+     + C   TS  V      ANN+AH + +
Sbjct: 6   LLVVCLGIACQDVTSAAVNHQRKSANNLAHSMKV 39


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -3

Query: 445 LCFIFSENSDGNVVLVELDKIVLSSTTLSKFWNTFFLSSKFSGTHSCTKI 296
           L F++ E     VV      + L   TL KF+  +  S   +G +SC K+
Sbjct: 188 LVFLWKEGDPVQVV----KNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKV 233


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -3

Query: 445 LCFIFSENSDGNVVLVELDKIVLSSTTLSKFWNTFFLSSKFSGTHSCTKI 296
           L F++ E     VV      + L   TL KF+  +  S   +G +SC K+
Sbjct: 188 LVFLWKEGDPVQVV----KNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKV 233


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 13/39 (33%), Positives = 15/39 (38%)
 Frame = +3

Query: 225 NLNADEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKK 341
           NL  DE F  V   CD        + +  C P   EL K
Sbjct: 24  NLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFRELLK 62


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 77  STPNNSNFFRFKLGSHDDTQ 18
           +T + S+FF   +G H D Q
Sbjct: 352 TTASGSSFFLAVMGCHPDIQ 371


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 250 WNCSSAFRFP 221
           W CSSA  FP
Sbjct: 171 WICSSAISFP 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,355
Number of Sequences: 438
Number of extensions: 3220
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)