Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_P22
         (393 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.27 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   0.47 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   2.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   7.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   7.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   7.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   7.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.0 bits (52), Expect = 0.27
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +1

Query: 4    ETALHPSVFKGTNSQRILQRYTNAGLSNDAFPVNTHRSIRVSKAPYSSENKVYTCRALRV 183
            ET LH  + K TN    +  YT+ G      P++      V +AP + +  V +  ++  
Sbjct: 1161 ETILH-GLKKYTNYSMEVLAYTSGGDGVRTTPIHCQTEQDVPEAPIAVKALVMSTDSILA 1219

Query: 184  SW 189
            SW
Sbjct: 1220 SW 1221


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 0.47
 Identities = 11/48 (22%), Positives = 19/48 (39%)
 Frame = +1

Query: 220 PSSQAVPIYRTLIKAKELKNAGWRALTSLSAEKGYHLWNADVRTDDNP 363
           PS +  P+     +  +L N     L   +  KG+H W    +   +P
Sbjct: 30  PSLRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQGAPSP 77


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 309 CRKRLSFMECRCKN 350
           C  R++  EC CKN
Sbjct: 121 CVDRIADFECNCKN 134


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 245  TGHLSKRRNLRTPDGGR*H 301
            +GH+S+RR++     G  H
Sbjct: 1158 SGHISRRRSMSASSRGDHH 1176


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 245  TGHLSKRRNLRTPDGGR*H 301
            +GH+S+RR++     G  H
Sbjct: 1158 SGHISRRRSMSASSRGDHH 1176


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 245  TGHLSKRRNLRTPDGGR*H 301
            +GH+S+RR++     G  H
Sbjct: 1158 SGHISRRRSMSASSRGDHH 1176


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 245  TGHLSKRRNLRTPDGGR*H 301
            +GH+S+RR++     G  H
Sbjct: 1158 SGHISRRRSMSASSRGDHH 1176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.129    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,668
Number of Sequences: 336
Number of extensions: 2002
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)