Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P22
(393 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1356| Best HMM Match : GCV_T (HMM E-Value=5.1e-40) 118 2e-27
SB_31872| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_57131| Best HMM Match : GCV_T (HMM E-Value=7e-25) 50 9e-07
SB_58622| Best HMM Match : GCV_T (HMM E-Value=6e-17) 48 4e-06
SB_26779| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012) 29 1.8
SB_23904| Best HMM Match : RdRP (HMM E-Value=0) 28 3.1
SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17) 27 4.1
SB_57195| Best HMM Match : UPF0126 (HMM E-Value=1.8) 27 4.1
SB_52998| Best HMM Match : DUF827 (HMM E-Value=4.4) 27 4.1
SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_37468| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_31033| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_35002| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_23540| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_21899| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_449| Best HMM Match : Adeno_PIX (HMM E-Value=0.8) 26 9.5
SB_35962| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_35743| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_29286| Best HMM Match : Avirulence (HMM E-Value=2.3) 26 9.5
>SB_1356| Best HMM Match : GCV_T (HMM E-Value=5.1e-40)
Length = 1006
Score = 118 bits (283), Expect = 2e-27
Identities = 58/124 (46%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
Frame = +1
Query: 31 KGTNSQRILQRYTNAGLSNDAFPVNTHRSIRVSKAPYSSENKVYTCRALRVSWSGELGWE 210
+G S+ IL + T+A LS++AF +TH+ I ++ P RALR+++ GELGWE
Sbjct: 346 QGPKSREILSKLTDADLSDEAFYFSTHKMINIAGHPV---------RALRLTFVGELGWE 396
Query: 211 LHVPSSQAVPIYRTLIKAKE---LKNAGWRALTSLSAEKGYHLWNADVRTDDNPIEANLG 381
LH+P VP+YR +++A + NAG+RA+ SLSAEKGY W+ D+R DD P+EA LG
Sbjct: 397 LHIPRDSCVPVYRAVMEAGREHGIVNAGYRAIDSLSAEKGYKHWHQDLRHDDTPLEAGLG 456
Query: 382 FTCR 393
FTC+
Sbjct: 457 FTCK 460
>SB_31872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 56.0 bits (129), Expect = 1e-08
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Frame = +1
Query: 34 GTNSQRILQRYTNAGLSNDAFPVNTHRSIRVSKAPYSSENKVYTCRALRVSWSGELGWEL 213
G ++ +LQ+ T +S+ F + I ++ P RA+R+S++GELGWEL
Sbjct: 30 GPKARDVLQKLTTEDMSHGKFKFLNVKDIEMAGVPV---------RAIRISYTGELGWEL 80
Query: 214 HVPSSQAVPIYRTLIKAKE---LKNAGWRALTSLSAEKGYHLWNAD 342
+ + +Y +++A + + N G A+T+L EKG+ W +
Sbjct: 81 YCSKEHTLKLYNAIMEAGQEFGIDNFGTFAMTTLRVEKGFRAWGLE 126
>SB_57131| Best HMM Match : GCV_T (HMM E-Value=7e-25)
Length = 537
Score = 49.6 bits (113), Expect = 9e-07
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Frame = +1
Query: 34 GTNSQRILQRYTNAGLSNDAFPVNTHRSIRVSKAPYSSENKVYTCRALRVSWSGELGWEL 213
G S +LQ +T L++D +P++T + + + ++S+ K + + V E GW+L
Sbjct: 324 GPMSAELLQGFTTTDLTSD-YPIDTFKELSLG---FASDVKAF--KRTNVG-DLEQGWQL 376
Query: 214 HVPSSQAVPIYRTLIKA---KELKNAGWRALTSLSAEKGYHLWNADVRTDDNPIEANL 378
+P+ A +Y L KA +++N G A+ +L EKGY ++ NP +A L
Sbjct: 377 IIPTEYASGLYSQLTKAGKAMDIRNVGCYAVDALRVEKGYPRLGIELTPFVNPFQAGL 434
>SB_58622| Best HMM Match : GCV_T (HMM E-Value=6e-17)
Length = 515
Score = 47.6 bits (108), Expect = 4e-06
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Frame = +1
Query: 34 GTNSQRILQRYTNAGLSNDAFPVNTHRSIRVSKAPYSSENKVYTCRALRVSWSGELGWEL 213
G ++ +LQ+ T +S+ F + I ++ P RA+R+S++GELGWEL
Sbjct: 385 GPKARDVLQKLTTEDMSHGKFKFLNVKDIEMAGVPV---------RAIRISYTGELGWEL 435
Query: 214 HVPSSQAVPIYRTLIKAKE---LKNAGWRALTSLSAEK--GYHLWNA 339
+ + +Y +++A + + N G A+T+L +K G W+A
Sbjct: 436 YCSKEHTLKLYNAIMEAGQEFGIDNFGTFAMTTLRVKKASGPGAWSA 482
>SB_26779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 45.6 bits (103), Expect = 1e-05
Identities = 34/115 (29%), Positives = 58/115 (50%)
Frame = +1
Query: 34 GTNSQRILQRYTNAGLSNDAFPVNTHRSIRVSKAPYSSENKVYTCRALRVSWSGELGWEL 213
G S+ ++Q T L + FPV+T + I + A + C + +++ S + GW L
Sbjct: 390 GPTSRDLMQPLTQTPLGIEEFPVDTCQVIDIDFAC----DVTLICSS-QLAASND-GWLL 443
Query: 214 HVPSSQAVPIYRTLIKAKELKNAGWRALTSLSAEKGYHLWNADVRTDDNPIEANL 378
VP+ Q +YR L K ++ GW A+ +++ EKG A++ P+EA L
Sbjct: 444 LVPNDQVTTLYRKL-KNCGARDVGWYAVDAITEEKGMPGLGAEIHPWITPLEAGL 497
>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
Length = 1348
Score = 28.7 bits (61), Expect = 1.8
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +1
Query: 148 ENKVYTCRALRVSWSGELGWELHVPSSQAVPIYRTLIKAKELKNAGWRALTSLSAEKGYH 327
+ +V + + L VS S +L W LH + + R L + LK +G L S + G
Sbjct: 1178 QERVSSYKLLGVSISDDLSWNLHCETIFKKAMKR-LYGLRVLKKSG---LASEDLD-GVK 1232
Query: 328 LWNADVRTDDNPIEANLGFTC 390
W+ D+ N + A L C
Sbjct: 1233 TWDLDLEAKLNELTAELSLYC 1253
>SB_23904| Best HMM Match : RdRP (HMM E-Value=0)
Length = 1511
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +2
Query: 47 KESFNVTRMRA--CPMT-HSQLIPIAVFEFRKRPTRQRI 154
+ S ++TR++ C +T HS+ IP AV FRK TRQ +
Sbjct: 1432 RSSRSLTRLQINLCDVTEHSRPIPTAVSCFRKNFTRQEV 1470
>SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17)
Length = 1178
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 222 IIAGRADLQDTYQSEGT*ERRMAGVDILKCRKRLSFMECR 341
++AG LQ ++ G + R +D+ KC +RL+F+E +
Sbjct: 777 VLAGLKGLQSSHSKLGN-KIRETKLDLEKCEQRLTFIETK 815
>SB_57195| Best HMM Match : UPF0126 (HMM E-Value=1.8)
Length = 1699
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 1 HETALHPSVFKGTNSQRILQRYTNAGLSNDAFPVNTHRSIRVSKAPYSSE 150
+E L PSVF G +++ Y AGL A T R + Y SE
Sbjct: 1643 YEFGLGPSVFSGDVVYAVVEAYNGAGLVTRAISPPT-RLVSADSQDYLSE 1691
>SB_52998| Best HMM Match : DUF827 (HMM E-Value=4.4)
Length = 202
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 222 IIAGRADLQDTYQSEGT*ERRMAGVDILKCRKRLSFMECR 341
++AG LQ ++ G + R +D+ KC +RL+F+E +
Sbjct: 56 VLAGLKGLQSSHSKLGN-KIRETKLDLEKCEQRLTFIETK 94
>SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 83 PMTHSQLIPIAVFEFRKRPT-RQRIKFTLVEHYESHGPGNSDGNCT 217
P++ S +P+ V + T R+R+K L+++ GN+DG T
Sbjct: 206 PLSSSAKLPVLVTCSGRHATIRRRVKVYLIDYCXXXXKGNADGVTT 251
>SB_37468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 76 GLSNDAFPVNTHRSIRVSKAPYSSENKVYTCRALRVSWS 192
G +A + H ++R + + Y + ++ Y +RVSWS
Sbjct: 50 GYRAEALDIRAHLNLRKAISKYQAGSQTYAEIIIRVSWS 88
>SB_31033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 247 RTLIKAKELKNAGWRALTSLSAEKG 321
+TLI+ ++LKN GW L E G
Sbjct: 104 KTLIQVRDLKNGGWTKPRRLFNENG 128
>SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 1 HETALHPSVFKGTNSQRILQRYTNAGLSNDAFPVNTHR 114
H +L F S+ +L++ NAG+ N A P+ THR
Sbjct: 873 HLPSLQDFEFPPLGSKPVLKK--NAGICNTASPMTTHR 908
>SB_35002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 907
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 265 KELKNAGWRALTSLSAEKGY---HLWNADVRTDDNPIEANLGFT 387
K L+++ WRA ++ + H WN D T +P E + F+
Sbjct: 725 KMLQSSFWRARMLTPSDYKFLIEHQWNGDAITYTSPAEVRMAFS 768
>SB_23540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 247 RTLIKAKELKNAGWRALTSLSAEKG 321
+TLI+ ++LKN GW L E G
Sbjct: 104 KTLIQVRDLKNGGWTKPRRLFNEDG 128
>SB_21899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 224 DGTCSSHPSSPDHETRNALQV 162
DG C++ PS PDH + Q+
Sbjct: 109 DGYCANPPSMPDHNVMHFTQI 129
>SB_449| Best HMM Match : Adeno_PIX (HMM E-Value=0.8)
Length = 217
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 247 RTLIKAKELKNAGWRALTSLSAEKG 321
+TLI+ ++LKN GW L E G
Sbjct: 6 KTLIQVRDLKNGGWTKPRRLFNEDG 30
>SB_35962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 247 RTLIKAKELKNAGWRALTSLSAEKG 321
+TLI+ ++LKN GW L E G
Sbjct: 108 KTLIQVRDLKNGGWTKPRRLFNEDG 132
>SB_35743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 247 RTLIKAKELKNAGWRALTSLSAEKG 321
+TLI+ ++LKN GW L E G
Sbjct: 102 KTLIQVRDLKNGGWTKPRRLFNEDG 126
>SB_29286| Best HMM Match : Avirulence (HMM E-Value=2.3)
Length = 662
Score = 26.2 bits (55), Expect = 9.5
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 151 NKVYTCRALRVSWSGELGWELHVPSSQA-VPIYRTLIKAKELKNAGWRALTSLSAEKGYH 327
NK+ +C L+VS G + L +P + V I RTL+ + + +A R L S S+ GY
Sbjct: 91 NKL-SCHRLQVSDVG-IKRSLLMPLQVSDVAIKRTLLSSSSMSDAIKRTLLSYSSIVGYR 148
Query: 328 LWNADVR 348
L +R
Sbjct: 149 LNELSLR 155
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.129 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,256,292
Number of Sequences: 59808
Number of extensions: 274782
Number of successful extensions: 791
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 678472135
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -