Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P21
(283 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 26 1.2
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 26 1.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 1.6
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 24 3.6
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 24 4.7
SPBC119.11c |pac1|hcs|double-strand-specific ribonuclease Pac1|S... 24 4.7
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 24 4.7
SPAC15A10.06 |||CPA1 sodium ion/proton antiporter|Schizosaccharo... 23 6.3
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 23 6.3
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 23 6.3
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 23 6.3
SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces ... 23 6.3
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 23 8.3
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 23 8.3
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 23 8.3
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 23 8.3
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 25.8 bits (54), Expect = 1.2
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Frame = +2
Query: 161 FFSQPSNGP----SGNYEPISTGPAFVDF 235
F + P+N P SG+Y PI P F F
Sbjct: 1560 FVTPPTNSPYAEVSGDYNPIHVSPTFAAF 1588
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 25.8 bits (54), Expect = 1.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 134 HVVIANPDPFFSQPSNGPSGNY-EPISTGPAF-VDFNPPNYPPKRYDKP 274
HV ++NPD P + S NY P+ A +F+ P + +Y P
Sbjct: 478 HVSLSNPDFAIGSPMSQDSSNYSSPLHRRKASDSNFSDPRFDDLKYLSP 526
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 1.6
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +2
Query: 167 SQPSNGPSGNYEPISTGPAFVDFNPPNYPP 256
S P N P P+S PA + P PP
Sbjct: 265 SSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 24.2 bits (50), Expect = 3.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 136 RCYCEPGSFLLSTIKRS*RKL*THKHWTGVRR 231
+C EP S STI+ HW G+R+
Sbjct: 444 KCLTEPTSRFQSTIEIQKHPFFKRLHWNGLRK 475
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 23.8 bits (49), Expect = 4.7
Identities = 7/24 (29%), Positives = 17/24 (70%)
Frame = +2
Query: 116 RDGNSDHVVIANPDPFFSQPSNGP 187
++ N D++ ++ DP +++PS+ P
Sbjct: 464 KEENGDNIEFSHFDPLYTRPSSHP 487
>SPBC119.11c |pac1|hcs|double-strand-specific ribonuclease
Pac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 23.8 bits (49), Expect = 4.7
Identities = 9/34 (26%), Positives = 14/34 (41%)
Frame = +2
Query: 155 DPFFSQPSNGPSGNYEPISTGPAFVDFNPPNYPP 256
+P +PS+ P + P +F YPP
Sbjct: 99 EPVIEEPSSHPKNQKNQENNEPTSEEFEEGEYPP 132
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 23.8 bits (49), Expect = 4.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 34 SFVFSSSPYCAWLPQTEFHVVDNSG 108
SF+F +SP + Q+ ++V NSG
Sbjct: 328 SFIFENSPSAEFSHQSSPYLVPNSG 352
>SPAC15A10.06 |||CPA1 sodium ion/proton
antiporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 23.4 bits (48), Expect = 6.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 86 STWWTIVVFHRDGNSD 133
S W I++F RDG+ D
Sbjct: 4 SKHWVILLFRRDGDDD 19
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 23.4 bits (48), Expect = 6.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 88 GTLFAAAMHNTAKKKTRNFHVEYVRVVC 5
GTL N++ K H ++R VC
Sbjct: 539 GTLVPPTKQNSSPKNGHGIHGSFLRTVC 566
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 23.4 bits (48), Expect = 6.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 182 GPSGNYEPISTGPAFVDFNPPNYPPK 259
G S Y P +T V+ PP P K
Sbjct: 215 GVSNYYNPSATSKPAVNVQPPRIPTK 240
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 23.4 bits (48), Expect = 6.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 173 PSNGPSGNYEPISTGPAFVDFNP 241
PSN PS + S PA V NP
Sbjct: 110 PSNNPSRHVSSTSNKPAAVSPNP 132
>SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 23.4 bits (48), Expect = 6.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 150 FAITTWSLLPSRWNTTIVHHVELCLRQPCTI 58
FA+ TW + W I++ + L+QP +
Sbjct: 51 FALGTWQVKRREWKMGIINTLTERLQQPAIL 81
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 23.0 bits (47), Expect = 8.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 137 VVIANPDPFFSQPSNGPSGNYEPIS 211
V+I + FF + S G NY+PI+
Sbjct: 388 VLILHLKRFFYEASGGTQKNYKPIA 412
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 23.0 bits (47), Expect = 8.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 200 EPISTGPAFVDFNPPNYP 253
+P S P+F+D N P+ P
Sbjct: 314 QPTSHVPSFIDTNSPSMP 331
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 23.0 bits (47), Expect = 8.3
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 161 FFSQPSNGPSGNYEPISTGPAFVDFNPPNYPPKRY 265
+ +Q GPS NY + V+ PNY + Y
Sbjct: 151 YIAQLVGGPSINYSTAAMLLGAVNIGNPNYEVQNY 185
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 23.0 bits (47), Expect = 8.3
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +2
Query: 191 GNYEPI--STGPAFVDFNPPNYPPKRYDKPLAR 283
G+Y P ST P + P+YPP Y AR
Sbjct: 117 GSYPPTQPSTQPLPQSYGYPSYPPAGYRGGSAR 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,299,704
Number of Sequences: 5004
Number of extensions: 27209
Number of successful extensions: 84
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 63619130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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