Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_P21
(283 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43126| Best HMM Match : Myosin_head (HMM E-Value=4.1e-32) 30 0.33
SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.58
SB_16552| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.76
SB_11832| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8
SB_44915| Best HMM Match : VWA (HMM E-Value=0) 27 2.3
SB_13163| Best HMM Match : VWA (HMM E-Value=2.3e-32) 27 2.3
SB_11705| Best HMM Match : Cu2_monooxygen (HMM E-Value=1.8e-17) 27 2.3
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 27 2.3
SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 27 3.1
SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_17335| Best HMM Match : Enolase_C (HMM E-Value=0) 27 3.1
SB_20038| Best HMM Match : wnt (HMM E-Value=3.8e-05) 26 4.1
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 26 4.1
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1
SB_16799| Best HMM Match : Extensin_2 (HMM E-Value=0.063) 26 4.1
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 26 4.1
SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 26 5.4
SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_37678| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_30459| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 26 5.4
SB_28786| Best HMM Match : PKD_channel (HMM E-Value=0) 26 5.4
SB_58045| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 25 7.1
SB_45411| Best HMM Match : SRCR (HMM E-Value=5e-19) 25 7.1
SB_59713| Best HMM Match : eIF-4B (HMM E-Value=4.5) 25 7.1
SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.1
SB_55050| Best HMM Match : Alpha_L_fucos (HMM E-Value=2.4e-18) 25 9.4
SB_52770| Best HMM Match : Pentaxin (HMM E-Value=3.8) 25 9.4
SB_36468| Best HMM Match : DUF1643 (HMM E-Value=4.1) 25 9.4
SB_31713| Best HMM Match : PSP1 (HMM E-Value=4.4) 25 9.4
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.4
SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18) 25 9.4
>SB_43126| Best HMM Match : Myosin_head (HMM E-Value=4.1e-32)
Length = 898
Score = 29.9 bits (64), Expect = 0.33
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 105 TIVHHVELCLRQPCTIRRRRKHETFMSNMSELSAE 1
T+++ ELC PC R R++H ++ +L+A+
Sbjct: 295 TLLNTTELCKMPPCIQRFRQRHVVYVPGKQQLTAD 329
>SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 29.1 bits (62), Expect = 0.58
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 158 PFFSQPSNGPSGNYEPISTGPAFVDFNPPNYPPKRYDKP 274
PF P P P P + F PPN+PP + +P
Sbjct: 270 PFNQAPPGFPPRWGPPPHMPPDYRGFPPPNFPPPDFSRP 308
>SB_16552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.7 bits (61), Expect = 0.76
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 38 SCFLLRRIVHGCRKQSSTWWTIVVFHRDGNSDHVVIANPDPFFSQPSNGPSGNYEPI 208
+C L RI R+Q T +VVF S + + P F+Q +N P+ N P+
Sbjct: 64 TCALYYRI-SSIRRQERTQGALVVFLLVIVSSKLSSSKPATIFAQETNTPNNNCRPV 119
>SB_11832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +2
Query: 152 PDPFFSQPSNGPSGNYE--PISTGPAFVDFNPPNY-PPKRYDKP 274
P ++ P P GNY P+ G + PP Y PP+ Y P
Sbjct: 362 PGTYYPPP---PQGNYNQYPVPGGQNYAGAPPPPYYPPQEYQAP 402
>SB_44915| Best HMM Match : VWA (HMM E-Value=0)
Length = 541
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 140 VIANPDPFFSQP-SNGPSGNYEPISTG 217
VIA PDP S+P +NG G PIS+G
Sbjct: 258 VIAEPDPCLSKPCANG--GTCSPISSG 282
>SB_13163| Best HMM Match : VWA (HMM E-Value=2.3e-32)
Length = 318
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 140 VIANPDPFFSQP-SNGPSGNYEPISTG 217
VIA PDP S+P +NG G PIS+G
Sbjct: 54 VIAEPDPCLSKPCANG--GTCSPISSG 78
>SB_11705| Best HMM Match : Cu2_monooxygen (HMM E-Value=1.8e-17)
Length = 413
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 161 FFSQPSNGPSGNYEPISTGPAFVDFNPPNYPPKRYDKPL 277
F+ P Y+P S+ D P NY PK DKPL
Sbjct: 268 FYYDPEEEGDSKYDPESSCRYLPDSYPLNY-PKDSDKPL 305
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 140 VIANPDPFFSQP-SNGPSGNYEPISTG 217
VIA PDP S+P +NG G PIS+G
Sbjct: 409 VIAEPDPCLSKPCANG--GTCSPISSG 433
>SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 403
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 173 PSNGPSGNYEPISTGPAFVDFNPPNYPPKRYDKPL 277
P++ PS Y+P+ P + PP Y KPL
Sbjct: 144 PTSPPSYPYKPLPRIPTSLSLKSLQAPPSYYYKPL 178
>SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 161 FFSQPSNGPSGNYEPISTGPAFVDFNPPNYPP 256
F S P + P + P S+ P+ +PP+ PP
Sbjct: 150 FPSVPPSSPPSSSSPSSSSPSVPPSSPPSSPP 181
>SB_17335| Best HMM Match : Enolase_C (HMM E-Value=0)
Length = 284
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 62 VHGCRKQSSTWWTIVVFHRDGNSDHVVIAN 151
+ C+ S W ++V HR G ++ IA+
Sbjct: 184 IKACKLAQSNGWGVMVSHRSGETEDTFIAD 213
>SB_20038| Best HMM Match : wnt (HMM E-Value=3.8e-05)
Length = 155
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 131 HYCRPDGTPLLSTTWNSVCGS-HAQYGEEENTKLSCR 24
HYC PD + + VC S + Y + T +SCR
Sbjct: 79 HYCHPDASKGSTGVLGRVCSSDNPDYLKCSETCMSCR 115
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 11 NSDIFDMKVSCFLLRRIVH 67
++D+F+M VSC +L R+V+
Sbjct: 231 HTDVFEMFVSCLILDRVVN 249
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 152 PDPFFSQPSNGPSGNYEPISTGPAFVDFNPPNYPP 256
P+P + P N P+ Y P P NPP YPP
Sbjct: 207 PNPPYPPPPNAPNPPYPPPPNAP-----NPP-YPP 235
>SB_16799| Best HMM Match : Extensin_2 (HMM E-Value=0.063)
Length = 597
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 152 PDPFFSQPSNGPSGNYE-PISTGPAFVDFNPPNYPPKRYDKP 274
P P S P P+ + P+ +G FV P PP + DKP
Sbjct: 229 PKPARSSPK--PAAEFRSPLESGSNFVIKPAPGEPPPKPDKP 268
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 152 PDPFFSQPSNGPSGNYE-PISTGPAFVDFNPPNYPPKRYDKP 274
P P S P P+ + P+ +G FV P PP + DKP
Sbjct: 174 PKPARSSPK--PAAEFRSPLESGSNFVIKPAPGEPPPKPDKP 213
>SB_56863| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4248
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 156 SGFAITTWSLLPSRWNTTIVHHVEL 82
SGFA +LPS WN VEL
Sbjct: 1169 SGFATRYLRILPSHWNIDACMRVEL 1193
>SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +2
Query: 173 PSNGPSGNYEPISTGPAFVDFNPPNYPPKRYDK 271
P P Y P++ G + PP+ P YD+
Sbjct: 177 PPPAPPPAYPPVTQGYNMSQYPPPDVAPPSYDE 209
>SB_37678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 159 GSGFAITTWSLLPSRWNTTIVHHVELCLRQPCTIRRRR 46
GSG I W++LP TI++ + L PC + R
Sbjct: 87 GSGGVIIVWTILPQLSTKTIIYPIRHQL--PCPLCHNR 122
>SB_30459| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 347
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 44 FLLRRIVHGCRKQSSTWWTIVVFHRDGNSDHVVIANPDPFFSQPSNGPSGNY 199
FL R+I+ C K T +V F R N +++ P P+N P G +
Sbjct: 156 FLKRQILRRCHKVF-TEPPLVAFRRSPNLRDILVKAKLPSDRSPTNQPPGAF 206
>SB_28786| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1846
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 262 SLGWIIGRIEIDERRSSAYGFIISAR 185
S W I RIEI E S Y + ++ R
Sbjct: 935 SPSWFIDRIEIAEEHSGKYWYFLARR 960
>SB_58045| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1752
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 125 CRPDGTPLLSTTWNSVCGSHAQYGEE 48
CRPDG+ L +S+C QYG E
Sbjct: 1094 CRPDGSYELVQCHSSLCFCVNQYGVE 1119
>SB_45411| Best HMM Match : SRCR (HMM E-Value=5e-19)
Length = 137
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -3
Query: 104 LLSTTWNSVCGSHAQYGEEENTKLSCRI 21
L++ TW +VCG + +G EE +++CR+
Sbjct: 18 LVNGTWGTVCG-NVSWGIEE-ARVACRM 43
>SB_59713| Best HMM Match : eIF-4B (HMM E-Value=4.5)
Length = 794
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/46 (19%), Positives = 20/46 (43%)
Frame = +2
Query: 140 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNPPNYPPKRYDKPL 277
++++ P P P + + + + PPNY ++Y P+
Sbjct: 44 IVSSQAPKSCSPPGSPQLDAQRKANSETSLSLQPPNYTNRKYSDPI 89
>SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 197 YEPISTGPAFVDFN--PPNYPPKRYDK 271
Y+ + F +F+ P NYPPK YD+
Sbjct: 485 YDDATNSNGFPNFDDVPMNYPPKFYDE 511
>SB_55050| Best HMM Match : Alpha_L_fucos (HMM E-Value=2.4e-18)
Length = 203
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +2
Query: 158 PFFSQPSNGPSGNY---EPISTGPAFVDFNPPNYPP 256
P F S G +G + PAFV+F NYPP
Sbjct: 58 PSFGAESGGTAGEWFWRYWHDGNPAFVNFMKKNYPP 93
>SB_52770| Best HMM Match : Pentaxin (HMM E-Value=3.8)
Length = 342
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2
Query: 216 PVLMGS*FPLGPFDG*EKKGSGFAITTWSLLPSRWNTTIV 97
PV S FP+ F E + FA+ W L +W ++
Sbjct: 52 PVGYKSGFPVVTFSSPEVELDQFAVCAWYSLYQKWTENVI 91
>SB_36468| Best HMM Match : DUF1643 (HMM E-Value=4.1)
Length = 471
Score = 25.0 bits (52), Expect = 9.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 53 RRIVHGCRKQSSTWWTI 103
+R V GC STWW +
Sbjct: 103 KRAVEGCSTCCSTWWAL 119
>SB_31713| Best HMM Match : PSP1 (HMM E-Value=4.4)
Length = 159
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 179 NGPSGNYEPISTGPAFVDFNPPNYPP 256
NGP Y P++ GP + N P YPP
Sbjct: 24 NGPV--YPPVN-GPVYPPVNKPVYPP 46
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 152 PDPFFSQPSNGPSGNYEPISTGPAFVDFNPPNYPPKRYDKP 274
P P SQP P +PI T PA P PP R KP
Sbjct: 1077 PPPSTSQPVPPPR-QPDPIPTNPAH-----PTEPPPRQPKP 1111
>SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)
Length = 736
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 176 SNGPSGNYEPISTGPAFVDFNPPNYPPKRYDKPLAR 283
+N PS N E +++ P PP+ PPK + P+ R
Sbjct: 157 NNQPSENTETLTSPP------PPSKPPKTTEDPMDR 186
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,185,695
Number of Sequences: 59808
Number of extensions: 222180
Number of successful extensions: 713
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 16,821,457
effective HSP length: 70
effective length of database: 12,634,897
effective search space used: 290602631
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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