Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_P19
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    29   0.037
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    27   0.11 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    27   0.11 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   5.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.5  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 28.7 bits (61), Expect = 0.037
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +1

Query: 343 LIDVEVHYNKVGKNKSRIFTTI--PRFSEGRPVTLGTIDNQGRIVGYPDYSWHDNQGNNC 516
           LID  +  N+      R + +   P+ +E  P T+ + D   RI       WH+      
Sbjct: 259 LIDQSLALNRGRDENPRTYRSDEGPQITELEPETIESQDAITRIYAIATM-WHETPEEMM 317

Query: 517 DGLTSVFRVAIDEC 558
           + L SVFR+  D+C
Sbjct: 318 EFLKSVFRLDQDQC 331


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 409 PRFSEGRPVTLGTIDNQGRIVGYPDYSWHDNQGNNCDGLTSVFRVAIDEC 558
           P+ +E  P T+ + D   RI       WH+      + L SVFR+  D+C
Sbjct: 516 PQITELEPETIESQDAITRIYACGTM-WHETPEEMMEFLKSVFRLDQDQC 564


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 409 PRFSEGRPVTLGTIDNQGRIVGYPDYSWHDNQGNNCDGLTSVFRVAIDEC 558
           P+ +E  P T+ + D   RI       WH+      + L SVFR+  D+C
Sbjct: 516 PQITELEPETIESQDAITRIYACGTM-WHETPEEMMEFLKSVFRLDQDQC 564


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 490 WHDNQGNN 513
           WH+N GNN
Sbjct: 376 WHNNNGNN 383


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 282 GKNVFNICPPSDNTKITFSCQT 217
           G+++FNI  P D+ ++     T
Sbjct: 145 GQSIFNITSPDDHDRLRMYINT 166


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 330 RNIVMLI*SGLLRLFTGKNVFNICPPSDNTKITFS 226
           RN    + SGL  L TG  +F    PSD +   FS
Sbjct: 155 RNSNHWVRSGLFALITGNVLFYPFLPSDVSYNLFS 189


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 330 RNIVMLI*SGLLRLFTGKNVFNICPPSDNTKITFS 226
           RN    + SGL  L TG  +F    PSD +   FS
Sbjct: 111 RNSNHWVRSGLFALITGNVLFYPFLPSDVSYNLFS 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,760
Number of Sequences: 336
Number of extensions: 2966
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)